RNA–Protein interactions for RNA: ENST00000540387.5

CTNNA1-243, Transcript of catenin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene CTNNA1, Length 2,684 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-243ENST00000540387 BET1O15155 118 aa9.46□□□□□ -0.9
CTNNA1-243ENST00000540387 HBP1O60381 514 aa9.46□□□□□ -0.9
CTNNA1-243ENST00000540387 NOS1APO75052 506 aaPredicted RBP9.46□□□□□ -0.9
CTNNA1-243ENST00000540387 INMTO95050 263 aa9.46□□□□□ -0.9
CTNNA1-243ENST00000540387 ALDOAP04075 364 aaKnown RBP9.46□□□□□ -0.9
CTNNA1-243ENST00000540387 IFI30P13284 250 aa9.46□□□□□ -0.9
CTNNA1-243ENST00000540387 TFE3P19532 575 aaPredicted RBP9.46□□□□□ -0.9
CTNNA1-243ENST00000540387 ATP6V1B2P21281 511 aa9.46□□□□□ -0.9
CTNNA1-243ENST00000540387 CRHBPP24387 322 aa9.46□□□□□ -0.9
CTNNA1-243ENST00000540387 GTF2E2P29084 291 aaKnown RBP9.46□□□□□ -0.9
CTNNA1-243ENST00000540387 SHMT2P34897 504 aa9.46□□□□□ -0.9
CTNNA1-243ENST00000540387 GP2P55259 537 aaKnown RBP9.46□□□□□ -0.9
CTNNA1-243ENST00000540387 MCCD1P59942 119 aaPredicted RBP9.46□□□□□ -0.9
CTNNA1-243ENST00000540387 PIGFQ07326 219 aa9.46□□□□□ -0.9
CTNNA1-243ENST00000540387 CBX2Q14781 532 aaPredicted RBP9.46□□□□□ -0.9
CTNNA1-243ENST00000540387 SKIV2LQ15477 1246 aaKnown RBP9.46□□□□□ -0.9
CTNNA1-243ENST00000540387 DPY19L1Q2PZI1 675 aa9.46□□□□□ -0.9
CTNNA1-243ENST00000540387 TYSND1Q2T9J0 566 aa9.46□□□□□ -0.9
CTNNA1-243ENST00000540387 WDR49Q8IV35 697 aa9.46□□□□□ -0.9
CTNNA1-243ENST00000540387 DDIASQ8IXT1 998 aa9.46□□□□□ -0.9
CTNNA1-243ENST00000540387 THNSL1Q8IYQ7 743 aa9.46□□□□□ -0.9
CTNNA1-243ENST00000540387 SLC7A3Q8WY07 619 aa9.46□□□□□ -0.9
CTNNA1-243ENST00000540387 BIRC7Q96CA5 298 aa9.46□□□□□ -0.9
CTNNA1-243ENST00000540387 CENPNQ96H22 339 aaPredicted RBP9.46□□□□□ -0.9
CTNNA1-243ENST00000540387 DPEP3Q9H4B8 488 aa9.46□□□□□ -0.9
CTNNA1-243ENST00000540387 IGSF5Q9NSI5 407 aa9.46□□□□□ -0.9
CTNNA1-243ENST00000540387 IL20Q9NYY1 176 aa9.46□□□□□ -0.9
CTNNA1-243ENST00000540387 CD300AQ9UGN4 299 aa9.46□□□□□ -0.9
CTNNA1-243ENST00000540387 NOSIPQ9Y314 301 aaKnown RBP9.46□□□□□ -0.9
CTNNA1-243ENST00000540387 PTCH2Q9Y6C5 1203 aa9.46□□□□□ -0.9
CTNNA1-243ENST00000540387 FAM159BA6NKW6 160 aa9.45□□□□□ -0.9
CTNNA1-243ENST00000540387 AP3D1O14617 1153 aa9.45□□□□□ -0.9
CTNNA1-243ENST00000540387 NDUFA2O43678 99 aa9.45□□□□□ -0.9
CTNNA1-243ENST00000540387 EXTL3O43909 919 aa9.45□□□□□ -0.9
CTNNA1-243ENST00000540387 CST8O60676 142 aa9.45□□□□□ -0.9
CTNNA1-243ENST00000540387 SEMA3DO95025 777 aa9.45□□□□□ -0.9
CTNNA1-243ENST00000540387 YES1P07947 543 aa9.45□□□□□ -0.9
CTNNA1-243ENST00000540387 HTR1AP08908 422 aa9.45□□□□□ -0.9
CTNNA1-243ENST00000540387 CYP2A7P20853 494 aa9.45□□□□□ -0.9
CTNNA1-243ENST00000540387 MMP8P22894 467 aa9.45□□□□□ -0.9
CTNNA1-243ENST00000540387 FASP25445 335 aa9.45□□□□□ -0.9
CTNNA1-243ENST00000540387 GMPRP36959 345 aa9.45□□□□□ -0.9
CTNNA1-243ENST00000540387 GARSP41250 739 aaKnown RBP9.45□□□□□ -0.9
CTNNA1-243ENST00000540387 RPS9P46781 194 aaKnown RBP9.45□□□□□ -0.9
CTNNA1-243ENST00000540387 SRP54P61011 504 aaKnown RBP9.45□□□□□ -0.9
CTNNA1-243ENST00000540387 VBP1P61758 197 aa9.45□□□□□ -0.9
CTNNA1-243ENST00000540387 RPL7AP62424 266 aaKnown RBP9.45□□□□□ -0.9
CTNNA1-243ENST00000540387 EMC2Q15006 297 aa9.45□□□□□ -0.9
CTNNA1-243ENST00000540387 FSCN1Q16658 493 aaKnown RBP9.45□□□□□ -0.9
CTNNA1-243ENST00000540387 GNASQ5JWF2 1037 aa9.45□□□□□ -0.9
CTNNA1-243ENST00000540387 COLEC12Q5KU26 742 aa9.45□□□□□ -0.9
CTNNA1-243ENST00000540387 NXNL2Q5VZ03 156 aa9.45□□□□□ -0.9
CTNNA1-243ENST00000540387 GK5Q6ZS86 529 aa9.45□□□□□ -0.9
CTNNA1-243ENST00000540387 CMTR2Q8IYT2 770 aaKnown RBP9.45□□□□□ -0.9
CTNNA1-243ENST00000540387 EID3Q8N140 333 aa9.45□□□□□ -0.9
CTNNA1-243ENST00000540387 BEST2Q8NFU1 509 aa9.45□□□□□ -0.9
CTNNA1-243ENST00000540387 FEZF2Q8TBJ5 459 aa9.45□□□□□ -0.9
CTNNA1-243ENST00000540387 MAGEE2Q8TD90 523 aaPredicted RBP9.45□□□□□ -0.9
CTNNA1-243ENST00000540387 TAS1R2Q8TE23 839 aa9.45□□□□□ -0.9
CTNNA1-243ENST00000540387 BSNDQ8WZ55 320 aa9.45□□□□□ -0.9
CTNNA1-243ENST00000540387 MARVELD3Q96A59 401 aa9.45□□□□□ -0.9
CTNNA1-243ENST00000540387 NXNL1Q96CM4 212 aa9.45□□□□□ -0.9
CTNNA1-243ENST00000540387 TMEM80Q96HE8 168 aa9.45□□□□□ -0.9
CTNNA1-243ENST00000540387 HSFY1Q96LI6 401 aa9.45□□□□□ -0.9
CTNNA1-243ENST00000540387 RIPOR3Q96MK2 946 aa9.45□□□□□ -0.9
CTNNA1-243ENST00000540387 ING2Q9H160 280 aa9.45□□□□□ -0.9
CTNNA1-243ENST00000540387 FARSBQ9NSD9 589 aaKnown RBP9.45□□□□□ -0.9
CTNNA1-243ENST00000540387 GMPR2Q9P2T1 348 aaKnown RBP9.45□□□□□ -0.9
CTNNA1-243ENST00000540387 DCDC2Q9UHG0 476 aa9.45□□□□□ -0.9
CTNNA1-243ENST00000540387 IP6K2Q9UHH9 426 aa9.45□□□□□ -0.9
CTNNA1-243ENST00000540387 FBXO5Q9UKT4 447 aa9.45□□□□□ -0.9
CTNNA1-243ENST00000540387 DNAH12Q6ZR08 3092 aa9.45□□□□□ -0.9
CTNNA1-243ENST00000540387 THSD7BQ9C0I4 1608 aa9.45□□□□□ -0.9
CTNNA1-243ENST00000540387 F8VP50 259 aa9.45□□□□□ -0.9
CTNNA1-243ENST00000540387 SSX4O60224 188 aa9.45□□□□□ -0.9
CTNNA1-243ENST00000540387 MAFO75444 373 aaPredicted RBP9.45□□□□□ -0.9
CTNNA1-243ENST00000540387 GOT2P00505 430 aaKnown RBP9.45□□□□□ -0.9
CTNNA1-243ENST00000540387 MYL3P08590 195 aa9.45□□□□□ -0.9
CTNNA1-243ENST00000540387 MPSTP25325 297 aa9.45□□□□□ -0.9
CTNNA1-243ENST00000540387 GRK4P32298 578 aa9.45□□□□□ -0.9
CTNNA1-243ENST00000540387 GRK3P35626 688 aa9.45□□□□□ -0.9
CTNNA1-243ENST00000540387 CPT1AP50416 773 aa9.45□□□□□ -0.9
CTNNA1-243ENST00000540387 LRRC38Q5VT99 294 aa9.45□□□□□ -0.9
CTNNA1-243ENST00000540387 LRRC71Q8N4P6 559 aa9.45□□□□□ -0.9
CTNNA1-243ENST00000540387 MCPH1Q8NEM0 835 aa9.45□□□□□ -0.9
CTNNA1-243ENST00000540387 DEPDC1BQ8WUY9 529 aa9.45□□□□□ -0.9
CTNNA1-243ENST00000540387 FAF2Q96CS3 445 aa9.45□□□□□ -0.9
CTNNA1-243ENST00000540387 KIFC3Q9BVG8 833 aa9.45□□□□□ -0.9
CTNNA1-243ENST00000540387 SLIRPQ9GZT3 109 aaKnown RBP9.45□□□□□ -0.9
CTNNA1-243ENST00000540387 SERHL2Q9H4I8 314 aa9.45□□□□□ -0.9
CTNNA1-243ENST00000540387 NECTIN3Q9NQS3 549 aa9.45□□□□□ -0.9
CTNNA1-243ENST00000540387 FBXL12Q9NXK8 326 aa9.45□□□□□ -0.9
CTNNA1-243ENST00000540387 RBAKQ9NYW8 714 aaPredicted RBP9.45□□□□□ -0.9
CTNNA1-243ENST00000540387 CPSF3Q9UKF6 684 aaKnown RBP9.45□□□□□ -0.9
CTNNA1-243ENST00000540387 COPG1Q9Y678 874 aaKnown RBP9.45□□□□□ -0.9
CTNNA1-243ENST00000540387 C16orf96A6NNT2 1141 aa9.44□□□□□ -0.9
CTNNA1-243ENST00000540387 CPNE3O75131 537 aaKnown RBP9.44□□□□□ -0.9
CTNNA1-243ENST00000540387 ZNF780AO75290 641 aaPredicted RBP9.44□□□□□ -0.9
CTNNA1-243ENST00000540387 PRKD3O94806 890 aa9.44□□□□□ -0.9
CTNNA1-243ENST00000540387 INHAP05111 366 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms