RNA–Protein interactions for RNA: ENST00000540159.3

BNIP3-202, Transcript of BCL2 interacting protein 3, humanhuman

TSL 1 (best)

Gene BNIP3, Length 3,066 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BNIP3-202ENST00000540159 INHBCP55103 352 aa13.6□□□□□ -0.23
BNIP3-202ENST00000540159 UFM1P61960 85 aa13.6□□□□□ -0.23
BNIP3-202ENST00000540159 CREB5Q02930 508 aa13.6□□□□□ -0.23
BNIP3-202ENST00000540159 AFMIDQ63HM1 303 aa13.6□□□□□ -0.23
BNIP3-202ENST00000540159 DNAJC14Q6Y2X3 702 aaPredicted RBP13.6□□□□□ -0.23
BNIP3-202ENST00000540159 TAS2R42Q7RTR8 314 aa13.6□□□□□ -0.23
BNIP3-202ENST00000540159 SLC22A9Q8IVM8 553 aa13.6□□□□□ -0.23
BNIP3-202ENST00000540159 APLFQ8IW19 511 aaPredicted RBP13.6□□□□□ -0.23
BNIP3-202ENST00000540159 ARHGAP18Q8N392 663 aa13.6□□□□□ -0.23
BNIP3-202ENST00000540159 TSPAN14Q8NG11 270 aa13.6□□□□□ -0.23
BNIP3-202ENST00000540159 PTCD2Q8WV60 388 aaKnown RBP13.6□□□□□ -0.23
BNIP3-202ENST00000540159 CDKN2AIPNLQ96HQ2 116 aa13.6□□□□□ -0.23
BNIP3-202ENST00000540159 FBXL20Q96IG2 436 aa13.6□□□□□ -0.23
BNIP3-202ENST00000540159 UPF3AQ9H1J1 476 aaKnown RBP13.6□□□□□ -0.23
BNIP3-202ENST00000540159 ZFP37Q9Y6Q3 630 aaPredicted RBP13.6□□□□□ -0.23
BNIP3-202ENST00000540159 MROH6A6NGR9 719 aa13.6□□□□□ -0.23
BNIP3-202ENST00000540159 NDUFS3O75489 264 aa13.6□□□□□ -0.23
BNIP3-202ENST00000540159 HSPA1AP0DMV8 641 aaKnown RBP13.6□□□□□ -0.23
BNIP3-202ENST00000540159 HSPA1BP0DMV9 641 aaKnown RBP13.6□□□□□ -0.23
BNIP3-202ENST00000540159 CLCQ05315 142 aa13.6□□□□□ -0.23
BNIP3-202ENST00000540159 SERINC3Q13530 473 aa13.6□□□□□ -0.23
BNIP3-202ENST00000540159 MBTPS1Q14703 1052 aa13.6□□□□□ -0.23
BNIP3-202ENST00000540159 PLCL1Q15111 1095 aa13.6□□□□□ -0.23
BNIP3-202ENST00000540159 CYP51A1Q16850 503 aa13.6□□□□□ -0.23
BNIP3-202ENST00000540159 OTUD3Q5T2D3 398 aaPredicted RBP13.6□□□□□ -0.23
BNIP3-202ENST00000540159 MRNIPQ6NTE8 343 aa13.6□□□□□ -0.23
BNIP3-202ENST00000540159 SLC15A3Q8IY34 581 aa13.6□□□□□ -0.23
BNIP3-202ENST00000540159 ATP6V0D2Q8N8Y2 350 aa13.6□□□□□ -0.23
BNIP3-202ENST00000540159 OR52B6Q8NGF0 335 aa13.6□□□□□ -0.23
BNIP3-202ENST00000540159 DLG3Q92796 817 aa13.6□□□□□ -0.23
BNIP3-202ENST00000540159 DGCR14Q96DF8 476 aaKnown RBP13.6□□□□□ -0.23
BNIP3-202ENST00000540159 CCDC126Q96EE4 140 aa13.6□□□□□ -0.23
BNIP3-202ENST00000540159 RANBP9Q96S59 729 aa13.6□□□□□ -0.23
BNIP3-202ENST00000540159 NMRK2Q9NPI5 230 aa13.6□□□□□ -0.23
BNIP3-202ENST00000540159 TMEM248Q9NWD8 314 aa13.6□□□□□ -0.23
BNIP3-202ENST00000540159 SUCOQ9UBS9 1254 aaKnown RBP13.6□□□□□ -0.23
BNIP3-202ENST00000540159 EIF2B4Q9UI10 523 aaKnown RBP13.6□□□□□ -0.23
BNIP3-202ENST00000540159 FKBPLQ9UIM3 349 aa13.6□□□□□ -0.23
BNIP3-202ENST00000540159 PCDHB5Q9Y5E4 795 aa13.6□□□□□ -0.23
BNIP3-202ENST00000540159 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.6□□□□□ -0.23
BNIP3-202ENST00000540159 MOXD2PA6NHM9 499 aa13.6□□□□□ -0.23
BNIP3-202ENST00000540159 ECI2O75521 394 aa13.6□□□□□ -0.23
BNIP3-202ENST00000540159 RTN3O95197 1032 aaPredicted RBP13.6□□□□□ -0.23
BNIP3-202ENST00000540159 SERPINF2P08697 491 aa13.6□□□□□ -0.23
BNIP3-202ENST00000540159 NDST2P52849 883 aa13.6□□□□□ -0.23
BNIP3-202ENST00000540159 PRKCQQ04759 706 aa13.6□□□□□ -0.23
BNIP3-202ENST00000540159 TWF1Q12792 350 aa13.6□□□□□ -0.23
BNIP3-202ENST00000540159 LSAMPQ13449 338 aa13.6□□□□□ -0.23
BNIP3-202ENST00000540159 NFYCQ13952 458 aa13.6□□□□□ -0.23
BNIP3-202ENST00000540159 MAPRE2Q15555 327 aa13.6□□□□□ -0.23
BNIP3-202ENST00000540159 ZIK1Q3SY52 487 aaPredicted RBP13.6□□□□□ -0.23
BNIP3-202ENST00000540159 PAGE3Q5JUK9 113 aa13.6□□□□□ -0.23
BNIP3-202ENST00000540159 SAMD4BQ5PRF9 694 aaKnown RBP13.6□□□□□ -0.23
BNIP3-202ENST00000540159 FAM45BPQ6NSW5 357 aa13.6□□□□□ -0.23
BNIP3-202ENST00000540159 TAS1R1Q7RTX1 841 aa13.6□□□□□ -0.23
BNIP3-202ENST00000540159 RAB44Q7Z6P3 723 aaPredicted RBP13.6□□□□□ -0.23
BNIP3-202ENST00000540159 ZNF683Q8IZ20 524 aa13.6□□□□□ -0.23
BNIP3-202ENST00000540159 MDGA1Q8NFP4 955 aa13.6□□□□□ -0.23
BNIP3-202ENST00000540159 TET1Q8NFU7 2136 aa13.6□□□□□ -0.23
BNIP3-202ENST00000540159 FAM45AQ8TCE6 357 aa13.6□□□□□ -0.23
BNIP3-202ENST00000540159 BTN2A3PQ96KV6 586 aa13.6□□□□□ -0.23
BNIP3-202ENST00000540159 INTS7Q9NVH2 962 aaKnown RBP13.6□□□□□ -0.23
BNIP3-202ENST00000540159 CMTM6Q9NX76 183 aa13.6□□□□□ -0.23
BNIP3-202ENST00000540159 OAZ3Q9UMX2 235 aa13.6□□□□□ -0.23
BNIP3-202ENST00000540159 NDUFAF1Q9Y375 327 aa13.6□□□□□ -0.23
BNIP3-202ENST00000540159 DOCK4Q8N1I0 1966 aa13.59□□□□□ -0.23
BNIP3-202ENST00000540159 BNIP3LO60238 219 aa13.59□□□□□ -0.23
BNIP3-202ENST00000540159 ZNF623O75123 536 aa13.59□□□□□ -0.23
BNIP3-202ENST00000540159 PRKAR2AP13861 404 aaKnown RBP13.59□□□□□ -0.23
BNIP3-202ENST00000540159 CTPS1P17812 591 aa13.59□□□□□ -0.23
BNIP3-202ENST00000540159 ZNF33AQ06730 810 aa13.59□□□□□ -0.23
BNIP3-202ENST00000540159 MIER2Q8N344 545 aa13.59□□□□□ -0.23
BNIP3-202ENST00000540159 EEF1AKMT1Q8WVE0 214 aa13.59□□□□□ -0.23
BNIP3-202ENST00000540159 LINC01599Q8WXQ3 324 aa13.59□□□□□ -0.23
BNIP3-202ENST00000540159 UPF1Q92900 1129 aaKnown RBP eCLIP13.59□□□□□ -0.233e-7■■■■□ 19.4
BNIP3-202ENST00000540159 PBXIP1Q96AQ6 731 aa13.59□□□□□ -0.23
BNIP3-202ENST00000540159 MRM3Q9HC36 420 aaKnown RBP13.59□□□□□ -0.23
BNIP3-202ENST00000540159 MTPAPQ9NVV4 582 aaKnown RBP eCLIP13.59□□□□□ -0.23
BNIP3-202ENST00000540159 SCML2Q9UQR0 700 aa13.59□□□□□ -0.23
BNIP3-202ENST00000540159 COMMD3-BMI1R4GMX3 469 aa13.59□□□□□ -0.23
BNIP3-202ENST00000540159 GREB1Q4ZG55 1949 aa13.59□□□□□ -0.23
BNIP3-202ENST00000540159 TRPM7Q96QT4 1865 aa13.59□□□□□ -0.23
BNIP3-202ENST00000540159 ADAM12O43184 909 aa13.59□□□□□ -0.23
BNIP3-202ENST00000540159 HTRA2O43464 458 aaPredicted RBP13.59□□□□□ -0.23
BNIP3-202ENST00000540159 CYBAP13498 195 aa13.59□□□□□ -0.23
BNIP3-202ENST00000540159 CALRP27797 417 aaKnown RBP13.59□□□□□ -0.23
BNIP3-202ENST00000540159 RFTN1Q14699 578 aaPredicted RBP13.59□□□□□ -0.23
BNIP3-202ENST00000540159 RASAL3Q86YV0 1011 aa13.59□□□□□ -0.23
BNIP3-202ENST00000540159 IFNL1Q8IU54 200 aa13.59□□□□□ -0.23
BNIP3-202ENST00000540159 TRIM62Q9BVG3 475 aa13.59□□□□□ -0.23
BNIP3-202ENST00000540159 ARNT2Q9HBZ2 717 aa13.59□□□□□ -0.23
BNIP3-202ENST00000540159 TMEM181Q9P2C4 612 aa13.59□□□□□ -0.23
BNIP3-202ENST00000540159 THEGQ9P2T0 379 aa13.59□□□□□ -0.23
BNIP3-202ENST00000540159 ZMYM5Q9UJ78 669 aa13.59□□□□□ -0.23
BNIP3-202ENST00000540159 TBC1D30Q9Y2I9 924 aa13.59□□□□□ -0.23
BNIP3-202ENST00000540159 MAGED1Q9Y5V3 778 aaPredicted RBP13.59□□□□□ -0.23
BNIP3-202ENST00000540159 SCN10AQ9Y5Y9 1956 aa13.59□□□□□ -0.23
BNIP3-202ENST00000540159 SNAP91O60641 907 aa13.58□□□□□ -0.23
BNIP3-202ENST00000540159 RPP40O75818 363 aaKnown RBP13.58□□□□□ -0.23
BNIP3-202ENST00000540159 OR4F21O95013 312 aa13.58□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms