RNA–Protein interactions for RNA: ENST00000540060.1

LPCAT3-209, Transcript of lysophosphatidylcholine acyltransferase 3, humanhuman

TSL 4

Gene LPCAT3, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT3-209ENST00000540060 ELF4Q99607 663 aaPredicted RBP6.95□□□□□ -1.3
LPCAT3-209ENST00000540060 APOOQ9BUR5 198 aa6.95□□□□□ -1.3
LPCAT3-209ENST00000540060 RIOK2Q9BVS4 552 aaKnown RBP6.95□□□□□ -1.3
LPCAT3-209ENST00000540060 GTPBP2Q9BX10 602 aaKnown RBP6.95□□□□□ -1.3
LPCAT3-209ENST00000540060 TEX101Q9BY14 249 aa6.95□□□□□ -1.3
LPCAT3-209ENST00000540060 CDH19Q9H159 772 aa6.95□□□□□ -1.3
LPCAT3-209ENST00000540060 GAREM1Q9H706 876 aa6.95□□□□□ -1.3
LPCAT3-209ENST00000540060 WDR26Q9H7D7 661 aa6.95□□□□□ -1.3
LPCAT3-209ENST00000540060 ERVMER34-1Q9H9K5 563 aa6.95□□□□□ -1.3
LPCAT3-209ENST00000540060 IL21RQ9HBE5 538 aa6.95□□□□□ -1.3
LPCAT3-209ENST00000540060 TMEM9BQ9NQ34 198 aa6.95□□□□□ -1.3
LPCAT3-209ENST00000540060 PIH1D1Q9NWS0 290 aaKnown RBP6.95□□□□□ -1.3
LPCAT3-209ENST00000540060 IL17CQ9P0M4 197 aa6.95□□□□□ -1.3
LPCAT3-209ENST00000540060 PNMA8BQ9ULN7 279 aaPredicted RBP6.95□□□□□ -1.3
LPCAT3-209ENST00000540060 FNDC3AQ9Y2H6 1198 aaKnown RBP6.95□□□□□ -1.3
LPCAT3-209ENST00000540060 ARL5AQ9Y689 179 aa6.95□□□□□ -1.3
LPCAT3-209ENST00000540060 A0A1B0GTQ1 180 aa6.94□□□□□ -1.3
LPCAT3-209ENST00000540060 TCRBV7S3A2A0A539 114 aa6.94□□□□□ -1.3
LPCAT3-209ENST00000540060 TMEM202A6NGA9 273 aa6.94□□□□□ -1.3
LPCAT3-209ENST00000540060 C4orf47A7E2U8 309 aa6.94□□□□□ -1.3
LPCAT3-209ENST00000540060 FADS2P1A8MWK0 482 aa6.94□□□□□ -1.3
LPCAT3-209ENST00000540060 GAPDHSO14556 408 aaPredicted RBP6.94□□□□□ -1.3
LPCAT3-209ENST00000540060 LDB2O43679 373 aa6.94□□□□□ -1.3
LPCAT3-209ENST00000540060 BUD23O43709 281 aaKnown RBP6.94□□□□□ -1.3
LPCAT3-209ENST00000540060 DFNA5O60443 496 aa6.94□□□□□ -1.3
LPCAT3-209ENST00000540060 PPFIA2O75334 1257 aa6.94□□□□□ -1.3
LPCAT3-209ENST00000540060 CRTAMO95727 393 aa6.94□□□□□ -1.3
LPCAT3-209ENST00000540060 PYGLP06737 847 aa6.94□□□□□ -1.3
LPCAT3-209ENST00000540060 HOXC4P09017 264 aaPredicted RBP6.94□□□□□ -1.3
LPCAT3-209ENST00000540060 NME1P15531 152 aaKnown RBP6.94□□□□□ -1.3
LPCAT3-209ENST00000540060 EPHA8P29322 1005 aaPredicted RBP6.94□□□□□ -1.3
LPCAT3-209ENST00000540060 SPAM1P38567 509 aa6.94□□□□□ -1.3
LPCAT3-209ENST00000540060 GPR1P46091 355 aa6.94□□□□□ -1.3
LPCAT3-209ENST00000540060 LMAN1P49257 510 aa6.94□□□□□ -1.3
LPCAT3-209ENST00000540060 CCT8P50990 548 aa6.94□□□□□ -1.3
LPCAT3-209ENST00000540060 ATXN3P54252 364 aaPredicted RBP6.94□□□□□ -1.3
LPCAT3-209ENST00000540060 ARHGAP8P85298 464 aa6.94□□□□□ -1.3
LPCAT3-209ENST00000540060 CDK3Q00526 305 aa6.94□□□□□ -1.3
LPCAT3-209ENST00000540060 CDK16Q00536 496 aa6.94□□□□□ -1.3
LPCAT3-209ENST00000540060 PDE1BQ01064 536 aa6.94□□□□□ -1.3
LPCAT3-209ENST00000540060 DR1Q01658 176 aa6.94□□□□□ -1.3
LPCAT3-209ENST00000540060 C2orf54Q08AI8 447 aa6.94□□□□□ -1.3
LPCAT3-209ENST00000540060 EIF2B5Q13144 721 aaKnown RBP6.94□□□□□ -1.3
LPCAT3-209ENST00000540060 DHX34Q14147 1143 aaKnown RBP6.94□□□□□ -1.3
LPCAT3-209ENST00000540060 PTK2BQ14289 1009 aa6.94□□□□□ -1.3
LPCAT3-209ENST00000540060 POU6F1Q14863 301 aa6.94□□□□□ -1.3
LPCAT3-209ENST00000540060 PPP1R7Q15435 360 aa6.94□□□□□ -1.3
LPCAT3-209ENST00000540060 STPG1Q5TH74 334 aa6.94□□□□□ -1.3
LPCAT3-209ENST00000540060 ANKRD22Q5VYY1 191 aa6.94□□□□□ -1.3
LPCAT3-209ENST00000540060 ALS2CLQ60I27 953 aa6.94□□□□□ -1.3
LPCAT3-209ENST00000540060 KCTD16Q68DU8 428 aa6.94□□□□□ -1.3
LPCAT3-209ENST00000540060 PPP1R21Q6ZMI0 780 aa6.94□□□□□ -1.3
LPCAT3-209ENST00000540060 KANSL1Q7Z3B3 1105 aa6.94□□□□□ -1.3
LPCAT3-209ENST00000540060 JAMLQ86YT9 394 aa6.94□□□□□ -1.3
LPCAT3-209ENST00000540060 KLHL7Q8IXQ5 586 aa6.94□□□□□ -1.3
LPCAT3-209ENST00000540060 OXR1Q8N573 874 aa6.94□□□□□ -1.3
LPCAT3-209ENST00000540060 DNAAF3Q8N9W5 541 aa6.94□□□□□ -1.3
LPCAT3-209ENST00000540060 SPATA4Q8NEY3 305 aa6.94□□□□□ -1.3
LPCAT3-209ENST00000540060 CPT1BQ92523 772 aa6.94□□□□□ -1.3
LPCAT3-209ENST00000540060 PDXPQ96GD0 296 aa6.94□□□□□ -1.3
LPCAT3-209ENST00000540060 COX14Q96I36 57 aa6.94□□□□□ -1.3
LPCAT3-209ENST00000540060 WDR92Q96MX6 357 aa6.94□□□□□ -1.3
LPCAT3-209ENST00000540060 C19orf43Q9BQ61 176 aa6.94□□□□□ -1.3
LPCAT3-209ENST00000540060 TRIM51Q9BSJ1 452 aa6.94□□□□□ -1.3
LPCAT3-209ENST00000540060 ZSCAN5AQ9BUG6 496 aa6.94□□□□□ -1.3
LPCAT3-209ENST00000540060 LGR4Q9BXB1 951 aa6.94□□□□□ -1.3
LPCAT3-209ENST00000540060 FAM83DQ9H4H8 585 aa6.94□□□□□ -1.3
LPCAT3-209ENST00000540060 CAAP1Q9H8G2 361 aa6.94□□□□□ -1.3
LPCAT3-209ENST00000540060 FGF22Q9HCT0 170 aa6.94□□□□□ -1.3
LPCAT3-209ENST00000540060 BPIFA1Q9NP55 256 aa6.94□□□□□ -1.3
LPCAT3-209ENST00000540060 CASS4Q9NQ75 786 aa6.94□□□□□ -1.3
LPCAT3-209ENST00000540060 RAD18Q9NS91 495 aa6.94□□□□□ -1.3
LPCAT3-209ENST00000540060 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP6.94□□□□□ -1.3
LPCAT3-209ENST00000540060 KLF15Q9UIH9 416 aa6.94□□□□□ -1.3
LPCAT3-209ENST00000540060 CDC23Q9UJX2 597 aa6.94□□□□□ -1.3
LPCAT3-209ENST00000540060 PKP3Q9Y446 797 aa6.94□□□□□ -1.3
LPCAT3-209ENST00000540060 KCTD3Q9Y597 815 aa6.94□□□□□ -1.3
LPCAT3-209ENST00000540060 MRFAP1Q9Y605 127 aa6.94□□□□□ -1.3
LPCAT3-209ENST00000540060 ASCC3Q8N3C0 2202 aaKnown RBP6.94□□□□□ -1.3
LPCAT3-209ENST00000540060 PTPRZ1P23471 2315 aaPredicted RBP6.94□□□□□ -1.3
LPCAT3-209ENST00000540060 SPTBN2O15020 2390 aa6.94□□□□□ -1.3
LPCAT3-209ENST00000540060 CABIN1Q9Y6J0 2220 aa6.93□□□□□ -1.3
LPCAT3-209ENST00000540060 CNOT1A5YKK6 2376 aaKnown RBP6.93□□□□□ -1.3
LPCAT3-209ENST00000540060 GLYATL1P3A0A0U1RQE8 302 aa6.93□□□□□ -1.3
LPCAT3-209ENST00000540060 MROH6A6NGR9 719 aa6.93□□□□□ -1.3
LPCAT3-209ENST00000540060 C2orf81A6NN90 581 aa6.93□□□□□ -1.3
LPCAT3-209ENST00000540060 CACNB4O00305 520 aaPredicted RBP6.93□□□□□ -1.3
LPCAT3-209ENST00000540060 DNALI1O14645 258 aaPredicted RBP6.93□□□□□ -1.3
LPCAT3-209ENST00000540060 INPP4BO15327 924 aa6.93□□□□□ -1.3
LPCAT3-209ENST00000540060 STX7O15400 261 aaKnown RBP6.93□□□□□ -1.3
LPCAT3-209ENST00000540060 YKT6O15498 198 aa6.93□□□□□ -1.3
LPCAT3-209ENST00000540060 TTI1O43156 1089 aa6.93□□□□□ -1.3
LPCAT3-209ENST00000540060 GPR39O43194 453 aa6.93□□□□□ -1.3
LPCAT3-209ENST00000540060 PCDHGA12O60330 932 aa6.93□□□□□ -1.3
LPCAT3-209ENST00000540060 URI1O94763 535 aaPredicted RBP6.93□□□□□ -1.3
LPCAT3-209ENST00000540060 PRAMEF1O95521 474 aa6.93□□□□□ -1.3
LPCAT3-209ENST00000540060 CSF2P04141 144 aa6.93□□□□□ -1.3
LPCAT3-209ENST00000540060 CD59P13987 128 aa6.93□□□□□ -1.3
LPCAT3-209ENST00000540060 TPH1P17752 444 aa6.93□□□□□ -1.3
LPCAT3-209ENST00000540060 LPOP22079 712 aaPredicted RBP6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms