RNA–Protein interactions for RNA: ENST00000540037.5

SCNN1A-215, Transcript of sodium channel epithelial 1 alpha subunit, humanhuman

TSL 1 (best) BASIC

Gene SCNN1A, Length 3,040 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1A-215ENST00000540037 PERM1Q5SV97 790 aa13.89□□□□□ -0.19
SCNN1A-215ENST00000540037 CCNYL2Q5T2Q4 361 aa13.89□□□□□ -0.19
SCNN1A-215ENST00000540037 PM20D1Q6GTS8 502 aa13.89□□□□□ -0.19
SCNN1A-215ENST00000540037 APOBEC3FQ8IUX4 373 aaKnown RBP13.89□□□□□ -0.19
SCNN1A-215ENST00000540037 SLC22A9Q8IVM8 553 aa13.89□□□□□ -0.19
SCNN1A-215ENST00000540037 PABPC5Q96DU9 382 aaKnown RBP13.89□□□□□ -0.19
SCNN1A-215ENST00000540037 C1orf50Q9BV19 199 aa13.89□□□□□ -0.19
SCNN1A-215ENST00000540037 CHID1Q9BWS9 393 aa13.89□□□□□ -0.19
SCNN1A-215ENST00000540037 ERVK-6Q9BXR3 956 aa13.89□□□□□ -0.19
SCNN1A-215ENST00000540037 CD320Q9NPF0 282 aa13.89□□□□□ -0.19
SCNN1A-215ENST00000540037 SEMA4BQ9NPR2 832 aaPredicted RBP13.89□□□□□ -0.19
SCNN1A-215ENST00000540037 MAN1A2O60476 641 aa13.88□□□□□ -0.19
SCNN1A-215ENST00000540037 WARSP23381 471 aaKnown RBP13.88□□□□□ -0.19
SCNN1A-215ENST00000540037 HRH2P25021 359 aa13.88□□□□□ -0.19
SCNN1A-215ENST00000540037 OPRL1P41146 370 aa13.88□□□□□ -0.19
SCNN1A-215ENST00000540037 LEPRP48357 1165 aaKnown RBP13.88□□□□□ -0.19
SCNN1A-215ENST00000540037 OR4D2P58180 307 aa13.88□□□□□ -0.19
SCNN1A-215ENST00000540037 UFM1P61960 85 aa13.88□□□□□ -0.19
SCNN1A-215ENST00000540037 AQP6Q13520 282 aa13.88□□□□□ -0.19
SCNN1A-215ENST00000540037 IMPG1Q17R60 797 aa13.88□□□□□ -0.19
SCNN1A-215ENST00000540037 SV2CQ496J9 727 aa13.88□□□□□ -0.19
SCNN1A-215ENST00000540037 IRAK1BP1Q5VVH5 260 aa13.88□□□□□ -0.19
SCNN1A-215ENST00000540037 ZNF354CQ86Y25 554 aa13.88□□□□□ -0.19
SCNN1A-215ENST00000540037 CILP2Q8IUL8 1156 aa13.88□□□□□ -0.19
SCNN1A-215ENST00000540037 BIRC7Q96CA5 298 aa13.88□□□□□ -0.19
SCNN1A-215ENST00000540037 TSGA13Q96PP4 275 aa13.88□□□□□ -0.19
SCNN1A-215ENST00000540037 IL12RB2Q99665 862 aa13.88□□□□□ -0.19
SCNN1A-215ENST00000540037 DGCR6LQ9BY27 220 aa13.88□□□□□ -0.19
SCNN1A-215ENST00000540037 NTN4Q9HB63 628 aa13.88□□□□□ -0.19
SCNN1A-215ENST00000540037 PCDH12Q9NPG4 1184 aa13.88□□□□□ -0.19
SCNN1A-215ENST00000540037 ANAPC2Q9UJX6 822 aa13.88□□□□□ -0.19
SCNN1A-215ENST00000540037 ERGIC3Q9Y282 383 aa13.88□□□□□ -0.19
SCNN1A-215ENST00000540037 BBIP1A8MTZ0 92 aa13.88□□□□□ -0.19
SCNN1A-215ENST00000540037 AZIN1O14977 448 aa13.88□□□□□ -0.19
SCNN1A-215ENST00000540037 NOL3O60936 208 aaKnown RBP13.88□□□□□ -0.19
SCNN1A-215ENST00000540037 CPNE6O95741 557 aa13.88□□□□□ -0.19
SCNN1A-215ENST00000540037 ALDH2P05091 517 aa13.88□□□□□ -0.19
SCNN1A-215ENST00000540037 PRSS56P0CW18 603 aa13.88□□□□□ -0.19
SCNN1A-215ENST00000540037 MBL2P11226 248 aaPredicted RBP13.88□□□□□ -0.19
SCNN1A-215ENST00000540037 CCNCP24863 283 aa13.88□□□□□ -0.19
SCNN1A-215ENST00000540037 ATP4BP51164 291 aa13.88□□□□□ -0.19
SCNN1A-215ENST00000540037 BNIP2Q12982 314 aa13.88□□□□□ -0.19
SCNN1A-215ENST00000540037 AAK1Q2M2I8 961 aa13.88□□□□□ -0.19
SCNN1A-215ENST00000540037 RGS21Q2M5E4 152 aa13.88□□□□□ -0.19
SCNN1A-215ENST00000540037 BLOC1S3Q6QNY0 202 aa13.88□□□□□ -0.19
SCNN1A-215ENST00000540037 HS3ST5Q8IZT8 346 aa13.88□□□□□ -0.19
SCNN1A-215ENST00000540037 L3HYPDHQ96EM0 354 aa13.88□□□□□ -0.19
SCNN1A-215ENST00000540037 KLHL5Q96PQ7 755 aa13.88□□□□□ -0.19
SCNN1A-215ENST00000540037 SDR39U1Q9NRG7 319 aaPredicted RBP13.88□□□□□ -0.19
SCNN1A-215ENST00000540037 SACM1LQ9NTJ5 587 aa13.88□□□□□ -0.19
SCNN1A-215ENST00000540037 RIC8BQ9NVN3 520 aa13.88□□□□□ -0.19
SCNN1A-215ENST00000540037 TTC3P53804 2025 aa13.88□□□□□ -0.19
SCNN1A-215ENST00000540037 ADM5C9JUS6 153 aa13.88□□□□□ -0.19
SCNN1A-215ENST00000540037 AP3B1O00203 1094 aa13.88□□□□□ -0.19
SCNN1A-215ENST00000540037 LDLRP01130 860 aa13.88□□□□□ -0.19
SCNN1A-215ENST00000540037 TTKP33981 857 aa13.88□□□□□ -0.19
SCNN1A-215ENST00000540037 EIF2B2P49770 351 aaKnown RBP13.88□□□□□ -0.19
SCNN1A-215ENST00000540037 PLA2G16P53816 162 aa13.88□□□□□ -0.19
SCNN1A-215ENST00000540037 AIF1P55008 147 aa13.88□□□□□ -0.19
SCNN1A-215ENST00000540037 GEMP55040 296 aa13.88□□□□□ -0.19
SCNN1A-215ENST00000540037 ITKQ08881 620 aa13.88□□□□□ -0.19
SCNN1A-215ENST00000540037 GALNT1Q10472 559 aaPredicted RBP13.88□□□□□ -0.19
SCNN1A-215ENST00000540037 R3HCC1LQ7Z5L2 792 aaKnown RBP13.88□□□□□ -0.19
SCNN1A-215ENST00000540037 KLHDC8BQ8IXV7 354 aa13.88□□□□□ -0.19
SCNN1A-215ENST00000540037 DCP1BQ8IZD4 617 aaKnown RBP13.88□□□□□ -0.19
SCNN1A-215ENST00000540037 PPTC7Q8NI37 304 aa13.88□□□□□ -0.19
SCNN1A-215ENST00000540037 ESAMQ96AP7 390 aa13.88□□□□□ -0.19
SCNN1A-215ENST00000540037 ENTPD7Q9NQZ7 604 aa13.88□□□□□ -0.19
SCNN1A-215ENST00000540037 EXD2Q9NVH0 621 aa13.88□□□□□ -0.19
SCNN1A-215ENST00000540037 PDCD11Q14690 1871 aaKnown RBP13.87□□□□□ -0.19
SCNN1A-215ENST00000540037 MOCS2O96007 188 aaPredicted RBP13.87□□□□□ -0.19
SCNN1A-215ENST00000540037 ALBP02768 609 aa13.87□□□□□ -0.19
SCNN1A-215ENST00000540037 MTHFD2P13995 350 aa13.87□□□□□ -0.19
SCNN1A-215ENST00000540037 ZFP36L2P47974 494 aaKnown RBP13.87□□□□□ -0.19
SCNN1A-215ENST00000540037 TIAL1Q01085 375 aaKnown RBP eCLIP13.87□□□□□ -0.19
SCNN1A-215ENST00000540037 TIGD2Q4W5G0 525 aa13.87□□□□□ -0.19
SCNN1A-215ENST00000540037 ZNF549Q6P9A3 640 aa13.87□□□□□ -0.19
SCNN1A-215ENST00000540037 ZNF773Q6PK81 442 aa13.87□□□□□ -0.19
SCNN1A-215ENST00000540037 TMCO5AQ8N6Q1 288 aa13.87□□□□□ -0.19
SCNN1A-215ENST00000540037 PDZD8Q8NEN9 1154 aa13.87□□□□□ -0.19
SCNN1A-215ENST00000540037 HEPHQ9BQS7 1158 aa13.87□□□□□ -0.19
SCNN1A-215ENST00000540037 ING2Q9H160 280 aa13.87□□□□□ -0.19
SCNN1A-215ENST00000540037 WARS2Q9UGM6 360 aaKnown RBP13.87□□□□□ -0.19
SCNN1A-215ENST00000540037 KRBA1A5PL33 1030 aa13.87□□□□□ -0.19
SCNN1A-215ENST00000540037 HHLA1C9JL84 531 aa13.87□□□□□ -0.19
SCNN1A-215ENST00000540037 MATN3O15232 486 aa13.87□□□□□ -0.19
SCNN1A-215ENST00000540037 PSMD3O43242 534 aa13.87□□□□□ -0.19
SCNN1A-215ENST00000540037 CLPXO76031 633 aa13.87□□□□□ -0.19
SCNN1A-215ENST00000540037 SEC14L2O76054 403 aa13.87□□□□□ -0.19
SCNN1A-215ENST00000540037 S1PR4O95977 384 aa13.87□□□□□ -0.19
SCNN1A-215ENST00000540037 GPIP06744 558 aa13.87□□□□□ -0.19
SCNN1A-215ENST00000540037 CLCN5P51795 746 aa13.87□□□□□ -0.19
SCNN1A-215ENST00000540037 GRSF1Q12849 480 aaKnown RBP eCLIP13.87□□□□□ -0.19
SCNN1A-215ENST00000540037 NIPAL1Q6NVV3 410 aa13.87□□□□□ -0.19
SCNN1A-215ENST00000540037 PARP8Q8N3A8 854 aa13.87□□□□□ -0.19
SCNN1A-215ENST00000540037 SCAMP5Q8TAC9 235 aa13.87□□□□□ -0.19
SCNN1A-215ENST00000540037 SLC22A17Q8WUG5 538 aa13.87□□□□□ -0.19
SCNN1A-215ENST00000540037 EMID1Q96A84 441 aaPredicted RBP13.87□□□□□ -0.19
SCNN1A-215ENST00000540037 TAMM41Q96BW9 452 aa13.87□□□□□ -0.19
SCNN1A-215ENST00000540037 PGAP3Q96FM1 320 aaPredicted RBP13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms