RNA–Protein interactions for RNA: ENST00000540022.5

TNFRSF1A-213, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1A, Length 1,527 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-213ENST00000540022 CD6P30203 668 aa18.84■□□□□ 0.61
TNFRSF1A-213ENST00000540022 OXTRP30559 389 aa18.84■□□□□ 0.61
TNFRSF1A-213ENST00000540022 HOXA6P31267 233 aa18.84■□□□□ 0.61
TNFRSF1A-213ENST00000540022 STX2P32856 288 aa18.84■□□□□ 0.61
TNFRSF1A-213ENST00000540022 RPS21P63220 83 aaKnown RBP18.84■□□□□ 0.61
TNFRSF1A-213ENST00000540022 MGAT5Q09328 741 aa18.84■□□□□ 0.61
TNFRSF1A-213ENST00000540022 FGL2Q14314 439 aa18.84■□□□□ 0.61
TNFRSF1A-213ENST00000540022 EFTUD2Q15029 972 aaKnown RBP eCLIP18.84■□□□□ 0.616e-7■■■■■ 53.3
TNFRSF1A-213ENST00000540022 KBTBD12Q3ZCT8 623 aa18.84■□□□□ 0.61
TNFRSF1A-213ENST00000540022 HSP90AA5PQ58FG0 334 aa18.84■□□□□ 0.61
TNFRSF1A-213ENST00000540022 ZDHHC20Q5W0Z9 365 aa18.84■□□□□ 0.61
TNFRSF1A-213ENST00000540022 CYP2U1Q7Z449 544 aa18.84■□□□□ 0.61
TNFRSF1A-213ENST00000540022 HORMAD1Q86X24 394 aa18.84■□□□□ 0.61
TNFRSF1A-213ENST00000540022 OR4L1Q8NH43 312 aa18.84■□□□□ 0.61
TNFRSF1A-213ENST00000540022 KLK6Q92876 244 aa18.84■□□□□ 0.61
TNFRSF1A-213ENST00000540022 PLEKHG4BQ96PX9 1271 aa18.84■□□□□ 0.61
TNFRSF1A-213ENST00000540022 C1QTNF2Q9BXJ5 285 aa18.84■□□□□ 0.61
TNFRSF1A-213ENST00000540022 FAM83DQ9H4H8 585 aa18.84■□□□□ 0.61
TNFRSF1A-213ENST00000540022 PPANQ9NQ55 473 aaKnown RBP18.84■□□□□ 0.61
TNFRSF1A-213ENST00000540022 ZSCAN32Q9NX65 697 aa18.84■□□□□ 0.61
TNFRSF1A-213ENST00000540022 SLC17A6Q9P2U8 582 aa18.84■□□□□ 0.61
TNFRSF1A-213ENST00000540022 NFKBIL1Q9UBC1 381 aaPredicted RBP18.84■□□□□ 0.61
TNFRSF1A-213ENST00000540022 APPL1Q9UKG1 709 aa18.84■□□□□ 0.61
TNFRSF1A-213ENST00000540022 SDK1Q7Z5N4 2213 aa18.83■□□□□ 0.6
TNFRSF1A-213ENST00000540022 FAM159BA6NKW6 160 aa18.83■□□□□ 0.6
TNFRSF1A-213ENST00000540022 CXorf49A8MYA2 514 aaPredicted RBP18.83■□□□□ 0.6
TNFRSF1A-213ENST00000540022 C10orf142B7Z368 130 aa18.83■□□□□ 0.6
TNFRSF1A-213ENST00000540022 DYNC1I1O14576 645 aa18.83■□□□□ 0.6
TNFRSF1A-213ENST00000540022 GPR39O43194 453 aa18.83■□□□□ 0.6
TNFRSF1A-213ENST00000540022 SRP72O76094 671 aaKnown RBP18.83■□□□□ 0.6
TNFRSF1A-213ENST00000540022 SHBGP04278 402 aa18.83■□□□□ 0.6
TNFRSF1A-213ENST00000540022 PRSS56P0CW18 603 aa18.83■□□□□ 0.6
TNFRSF1A-213ENST00000540022 FOXN2P32314 431 aa18.83■□□□□ 0.6
TNFRSF1A-213ENST00000540022 DCDC1P59894 354 aa18.83■□□□□ 0.6
TNFRSF1A-213ENST00000540022 SRSF5Q13243 272 aaKnown RBP18.83■□□□□ 0.6
TNFRSF1A-213ENST00000540022 CHRNA6Q15825 494 aa18.83■□□□□ 0.6
TNFRSF1A-213ENST00000540022 ZNF284Q2VY69 593 aa18.83■□□□□ 0.6
TNFRSF1A-213ENST00000540022 HENMT1Q5T8I9 393 aaKnown RBP18.83■□□□□ 0.6
TNFRSF1A-213ENST00000540022 NEPROQ6NW34 567 aa18.83■□□□□ 0.6
TNFRSF1A-213ENST00000540022 AFTPHQ6ULP2 937 aa18.83■□□□□ 0.6
TNFRSF1A-213ENST00000540022 NRSN1Q8IZ57 195 aa18.83■□□□□ 0.6
TNFRSF1A-213ENST00000540022 PNPLA1Q8N8W4 532 aa18.83■□□□□ 0.6
TNFRSF1A-213ENST00000540022 NUS1Q96E22 293 aa18.83■□□□□ 0.6
TNFRSF1A-213ENST00000540022 SGSM3Q96HU1 749 aa18.83■□□□□ 0.6
TNFRSF1A-213ENST00000540022 RIOK2Q9BVS4 552 aaKnown RBP18.83■□□□□ 0.6
TNFRSF1A-213ENST00000540022 ACSS3Q9H6R3 686 aa18.83■□□□□ 0.6
TNFRSF1A-213ENST00000540022 RAD18Q9NS91 495 aa18.83■□□□□ 0.6
TNFRSF1A-213ENST00000540022 IARS2Q9NSE4 1012 aaKnown RBP18.83■□□□□ 0.6
TNFRSF1A-213ENST00000540022 MARCH4Q9P2E8 410 aaPredicted RBP18.83■□□□□ 0.6
TNFRSF1A-213ENST00000540022 PCDHGA2Q9Y5H1 932 aa18.83■□□□□ 0.6
TNFRSF1A-213ENST00000540022 LILRB5O75023 590 aa18.82■□□□□ 0.6
TNFRSF1A-213ENST00000540022 PRAMEF1O95521 474 aa18.82■□□□□ 0.6
TNFRSF1A-213ENST00000540022 PAK4O96013 591 aaPredicted RBP18.82■□□□□ 0.6
TNFRSF1A-213ENST00000540022 LMNAP02545 664 aaKnown RBP18.82■□□□□ 0.6
TNFRSF1A-213ENST00000540022 NUDT17P0C025 328 aa18.82■□□□□ 0.6
TNFRSF1A-213ENST00000540022 MAT2AP31153 395 aaKnown RBP18.82■□□□□ 0.6
TNFRSF1A-213ENST00000540022 CA5AP35218 305 aa18.82■□□□□ 0.6
TNFRSF1A-213ENST00000540022 THOC5Q13769 683 aaKnown RBP18.82■□□□□ 0.6
TNFRSF1A-213ENST00000540022 CASP8Q14790 479 aa18.82■□□□□ 0.6
TNFRSF1A-213ENST00000540022 AGERQ15109 404 aa18.82■□□□□ 0.6
TNFRSF1A-213ENST00000540022 TEDDM1Q5T9Z0 273 aa18.82■□□□□ 0.6
TNFRSF1A-213ENST00000540022 TRIM69Q86WT6 500 aa18.82■□□□□ 0.6
TNFRSF1A-213ENST00000540022 OR2W6PQ8NHA6 318 aa18.82■□□□□ 0.6
TNFRSF1A-213ENST00000540022 AP2M1Q96CW1 435 aa18.82■□□□□ 0.6
TNFRSF1A-213ENST00000540022 CYTH2Q99418 400 aa18.82■□□□□ 0.6
TNFRSF1A-213ENST00000540022 AGAP2Q99490 1192 aa18.82■□□□□ 0.6
TNFRSF1A-213ENST00000540022 GPR174Q9BXC1 333 aa18.82■□□□□ 0.6
TNFRSF1A-213ENST00000540022 FAM126AQ9BYI3 521 aaPredicted RBP18.82■□□□□ 0.6
TNFRSF1A-213ENST00000540022 SLC17A9Q9BYT1 436 aa18.82■□□□□ 0.6
TNFRSF1A-213ENST00000540022 CDH19Q9H159 772 aa18.82■□□□□ 0.6
TNFRSF1A-213ENST00000540022 C6orf106Q9H6K1 298 aaPredicted RBP18.82■□□□□ 0.6
TNFRSF1A-213ENST00000540022 SLC30A1Q9Y6M5 507 aa18.82■□□□□ 0.6
TNFRSF1A-213ENST00000540022 SPTBN4Q9H254 2564 aa18.82■□□□□ 0.6
TNFRSF1A-213ENST00000540022 RALGAPA1Q6GYQ0 2036 aa18.81■□□□□ 0.6
TNFRSF1A-213ENST00000540022 UGT1A9O60656 530 aa18.81■□□□□ 0.6
TNFRSF1A-213ENST00000540022 F7P08709 466 aaPredicted RBP18.81■□□□□ 0.6
TNFRSF1A-213ENST00000540022 UGT1A6P19224 532 aa18.81■□□□□ 0.6
TNFRSF1A-213ENST00000540022 UGT1A1P22309 533 aa18.81■□□□□ 0.6
TNFRSF1A-213ENST00000540022 UGT1A4P22310 534 aa18.81■□□□□ 0.6
TNFRSF1A-213ENST00000540022 UGT1A3P35503 534 aa18.81■□□□□ 0.6
TNFRSF1A-213ENST00000540022 UGT1A5P35504 534 aa18.81■□□□□ 0.6
TNFRSF1A-213ENST00000540022 CDKN1CP49918 316 aaPredicted RBP18.81■□□□□ 0.6
TNFRSF1A-213ENST00000540022 SEMA3AQ14563 771 aa18.81■□□□□ 0.6
TNFRSF1A-213ENST00000540022 ZRANB3Q5FWF4 1079 aa18.81■□□□□ 0.6
TNFRSF1A-213ENST00000540022 PSAPL1Q6NUJ1 521 aa18.81■□□□□ 0.6
TNFRSF1A-213ENST00000540022 ZNF449Q6P9G9 518 aa18.81■□□□□ 0.6
TNFRSF1A-213ENST00000540022 ZNF765Q7L2R6 523 aa18.81■□□□□ 0.6
TNFRSF1A-213ENST00000540022 DENND6AQ8IWF6 608 aa18.81■□□□□ 0.6
TNFRSF1A-213ENST00000540022 PIANPQ8IYJ0 282 aa18.81■□□□□ 0.6
TNFRSF1A-213ENST00000540022 IQCKQ8N0W5 287 aa18.81■□□□□ 0.6
TNFRSF1A-213ENST00000540022 PELI3Q8N2H9 469 aa18.81■□□□□ 0.6
TNFRSF1A-213ENST00000540022 ZNF398Q8TD17 642 aa18.81■□□□□ 0.6
TNFRSF1A-213ENST00000540022 SPATA16Q9BXB7 569 aa18.81■□□□□ 0.6
TNFRSF1A-213ENST00000540022 FAM96AQ9H5X1 160 aa18.81■□□□□ 0.6
TNFRSF1A-213ENST00000540022 ASB8Q9H765 288 aa18.81■□□□□ 0.6
TNFRSF1A-213ENST00000540022 UGT1A7Q9HAW7 530 aa18.81■□□□□ 0.6
TNFRSF1A-213ENST00000540022 UGT1A10Q9HAW8 530 aa18.81■□□□□ 0.6
TNFRSF1A-213ENST00000540022 UGT1A8Q9HAW9 530 aa18.81■□□□□ 0.6
TNFRSF1A-213ENST00000540022 MBD1Q9UIS9 605 aaPredicted RBP18.81■□□□□ 0.6
TNFRSF1A-213ENST00000540022 PLAAQ9Y263 795 aa18.81■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms