RNA–Protein interactions for RNA: ENST00000539712.5

DDB1-215, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 1,020 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-215ENST00000539712 SPACA3Q8IXA5 215 aa16.68■□□□□ 0.26
DDB1-215ENST00000539712 CCDC170Q8IYT3 715 aa16.68■□□□□ 0.26
DDB1-215ENST00000539712 Q8N9G6 341 aaPredicted RBP16.68■□□□□ 0.26
DDB1-215ENST00000539712 BBC3Q96PG8 261 aaPredicted RBP16.68■□□□□ 0.26
DDB1-215ENST00000539712 GFM1Q96RP9 751 aaKnown RBP16.68■□□□□ 0.26
DDB1-215ENST00000539712 MLPHQ9BV36 600 aaPredicted RBP16.68■□□□□ 0.26
DDB1-215ENST00000539712 FOXP3Q9BZS1 431 aa16.68■□□□□ 0.26
DDB1-215ENST00000539712 SLC25A51Q9H1U9 297 aa16.68■□□□□ 0.26
DDB1-215ENST00000539712 HAUS2Q9NVX0 235 aa16.68■□□□□ 0.26
DDB1-215ENST00000539712 LRIT1Q9P2V4 623 aa16.68■□□□□ 0.26
DDB1-215ENST00000539712 DNPEPQ9ULA0 475 aa16.68■□□□□ 0.26
DDB1-215ENST00000539712 SSUH2Q9Y2M2 353 aa16.68■□□□□ 0.26
DDB1-215ENST00000539712 OAS3Q9Y6K5 1087 aaKnown RBP16.68■□□□□ 0.26
DDB1-215ENST00000539712 FASNP49327 2511 aaKnown RBP16.68■□□□□ 0.26
DDB1-215ENST00000539712 C1orf232A0A0U1RR37 186 aa16.67■□□□□ 0.26
DDB1-215ENST00000539712 FADS2P1A8MWK0 482 aa16.67■□□□□ 0.26
DDB1-215ENST00000539712 CDRT15L2A8MXV6 281 aa16.67■□□□□ 0.26
DDB1-215ENST00000539712 RRP8O43159 456 aaKnown RBP16.67■□□□□ 0.26
DDB1-215ENST00000539712 PSTPIP1O43586 416 aa16.67■□□□□ 0.26
DDB1-215ENST00000539712 CST8O60676 142 aa16.67■□□□□ 0.26
DDB1-215ENST00000539712 PTPN3P26045 913 aa16.67■□□□□ 0.26
DDB1-215ENST00000539712 CD68P34810 354 aaPredicted RBP16.67■□□□□ 0.26
DDB1-215ENST00000539712 NR2C2P49116 596 aa16.67■□□□□ 0.26
DDB1-215ENST00000539712 ZFP36L1Q07352 338 aaKnown RBP16.67■□□□□ 0.26
DDB1-215ENST00000539712 WASHC5Q12768 1159 aa16.67■□□□□ 0.26
DDB1-215ENST00000539712 ILF3Q12906 894 aaKnown RBP eCLIP16.67■□□□□ 0.26
DDB1-215ENST00000539712 GALNT3Q14435 633 aa16.67■□□□□ 0.26
DDB1-215ENST00000539712 TEX44Q53QW1 395 aa16.67■□□□□ 0.26
DDB1-215ENST00000539712 SLC30A9Q6PML9 568 aa16.67■□□□□ 0.26
DDB1-215ENST00000539712 LYSMD3Q7Z3D4 306 aa16.67■□□□□ 0.26
DDB1-215ENST00000539712 NT5DC3Q86UY8 548 aa16.67■□□□□ 0.26
DDB1-215ENST00000539712 NAGSQ8N159 534 aa16.67■□□□□ 0.26
DDB1-215ENST00000539712 ARL14Q8N4G2 192 aa16.67■□□□□ 0.26
DDB1-215ENST00000539712 EXD1Q8NHP7 514 aa16.67■□□□□ 0.26
DDB1-215ENST00000539712 SPATA22Q8NHS9 363 aa16.67■□□□□ 0.26
DDB1-215ENST00000539712 WDR36Q8NI36 951 aaKnown RBP16.67■□□□□ 0.26
DDB1-215ENST00000539712 ZDHHC1Q8WTX9 485 aa16.67■□□□□ 0.26
DDB1-215ENST00000539712 PATE1Q8WXA2 126 aa16.67■□□□□ 0.26
DDB1-215ENST00000539712 KRT35Q92764 455 aa16.67■□□□□ 0.26
DDB1-215ENST00000539712 LIN37Q96GY3 246 aaPredicted RBP16.67■□□□□ 0.26
DDB1-215ENST00000539712 GSDMCQ9BYG8 508 aa16.67■□□□□ 0.26
DDB1-215ENST00000539712 SYNDIG1Q9H7V2 258 aa16.67■□□□□ 0.26
DDB1-215ENST00000539712 GLOD4Q9HC38 313 aa16.67■□□□□ 0.26
DDB1-215ENST00000539712 ATXN7L1Q9ULK2 861 aaPredicted RBP16.67■□□□□ 0.26
DDB1-215ENST00000539712 REXO2Q9Y3B8 237 aaKnown RBP16.67■□□□□ 0.26
DDB1-215ENST00000539712 AHCTF1Q8WYP5 2266 aa16.66■□□□□ 0.26
DDB1-215ENST00000539712 CCDC187A0A096LP49 1063 aa16.66■□□□□ 0.26
DDB1-215ENST00000539712 A0A0A6YYK5 440 aaPredicted RBP16.66■□□□□ 0.26
DDB1-215ENST00000539712 RGSL1A5PLK6 1076 aa16.66■□□□□ 0.26
DDB1-215ENST00000539712 PPP1R12AO14974 1030 aaPredicted RBP16.66■□□□□ 0.26
DDB1-215ENST00000539712 INPP4BO15327 924 aa16.66■□□□□ 0.26
DDB1-215ENST00000539712 DNAJC6O75061 913 aa16.66■□□□□ 0.26
DDB1-215ENST00000539712 ECEL1O95672 775 aa16.66■□□□□ 0.26
DDB1-215ENST00000539712 MT-CYBP00156 380 aaPredicted RBP16.66■□□□□ 0.26
DDB1-215ENST00000539712 CCKBRP32239 447 aa16.66■□□□□ 0.26
DDB1-215ENST00000539712 PCBP4P57723 403 aaKnown RBP16.66■□□□□ 0.26
DDB1-215ENST00000539712 NR1D2Q14995 579 aa16.66■□□□□ 0.26
DDB1-215ENST00000539712 SLC14A2Q15849 920 aa16.66■□□□□ 0.26
DDB1-215ENST00000539712 LRRC69Q6ZNQ3 347 aa16.66■□□□□ 0.26
DDB1-215ENST00000539712 KDELC2Q7Z4H8 507 aa16.66■□□□□ 0.26
DDB1-215ENST00000539712 GAS2L3Q86XJ1 694 aa16.66■□□□□ 0.26
DDB1-215ENST00000539712 KATNAL2Q8IYT4 538 aa16.66■□□□□ 0.26
DDB1-215ENST00000539712 ZNF248Q8NDW4 579 aa16.66■□□□□ 0.26
DDB1-215ENST00000539712 MRFAP1L1Q96HT8 127 aa16.66■□□□□ 0.26
DDB1-215ENST00000539712 TEKT5Q96M29 485 aa16.66■□□□□ 0.26
DDB1-215ENST00000539712 ADGRE3Q9BY15 652 aa16.66■□□□□ 0.26
DDB1-215ENST00000539712 FAM83DQ9H4H8 585 aa16.66■□□□□ 0.26
DDB1-215ENST00000539712 SEPT10Q9P0V9 454 aa16.66■□□□□ 0.26
DDB1-215ENST00000539712 hCG_1818297A0A087WSY0 165 aa16.65■□□□□ 0.26
DDB1-215ENST00000539712 SOWAHDA6NJG2 315 aa16.65■□□□□ 0.26
DDB1-215ENST00000539712 EML2O95834 649 aa16.65■□□□□ 0.26
DDB1-215ENST00000539712 ATP1A1P05023 1023 aaKnown RBP16.65■□□□□ 0.26
DDB1-215ENST00000539712 PYGLP06737 847 aa16.65■□□□□ 0.26
DDB1-215ENST00000539712 PIRTP0C851 137 aa16.65■□□□□ 0.26
DDB1-215ENST00000539712 TFDP2Q14188 446 aa16.65■□□□□ 0.26
DDB1-215ENST00000539712 C11orf63Q6NUN7 778 aa16.65■□□□□ 0.26
DDB1-215ENST00000539712 MARK2Q7KZI7 788 aaKnown RBP16.65■□□□□ 0.26
DDB1-215ENST00000539712 TMC3Q7Z5M5 1100 aa16.65■□□□□ 0.26
DDB1-215ENST00000539712 CLEC14AQ86T13 490 aa16.65■□□□□ 0.26
DDB1-215ENST00000539712 SLITRK4Q8IW52 837 aa16.65■□□□□ 0.26
DDB1-215ENST00000539712 KIAA1524Q8TCG1 905 aa16.65■□□□□ 0.26
DDB1-215ENST00000539712 NAF1Q96HR8 494 aaKnown RBP16.65■□□□□ 0.26
DDB1-215ENST00000539712 OR2M4Q96R27 311 aa16.65■□□□□ 0.26
DDB1-215ENST00000539712 PANX2Q96RD6 677 aa16.65■□□□□ 0.26
DDB1-215ENST00000539712 HERPUD2Q9BSE4 406 aa16.65■□□□□ 0.26
DDB1-215ENST00000539712 MAGEE1Q9HCI5 957 aa16.65■□□□□ 0.26
DDB1-215ENST00000539712 THSD1Q9NS62 852 aa16.65■□□□□ 0.26
DDB1-215ENST00000539712 EPN1Q9Y6I3 576 aaPredicted RBP16.65■□□□□ 0.26
DDB1-215ENST00000539712 DUSP10Q9Y6W6 482 aa16.65■□□□□ 0.26
DDB1-215ENST00000539712 PPM1DO15297 605 aa16.64■□□□□ 0.25
DDB1-215ENST00000539712 TNFSF15O95150 251 aa16.64■□□□□ 0.25
DDB1-215ENST00000539712 ZRANB2O95218 330 aaKnown RBP eCLIP16.64■□□□□ 0.25
DDB1-215ENST00000539712 RBMS1P29558 406 aaKnown RBP16.64■□□□□ 0.25
DDB1-215ENST00000539712 INHBCP55103 352 aa16.64■□□□□ 0.25
DDB1-215ENST00000539712 OR1D5P58170 312 aa16.64■□□□□ 0.25
DDB1-215ENST00000539712 CDK18Q07002 472 aa16.64■□□□□ 0.25
DDB1-215ENST00000539712 TFDP3Q5H9I0 405 aa16.64■□□□□ 0.25
DDB1-215ENST00000539712 KAZNQ674X7 775 aa16.64■□□□□ 0.25
DDB1-215ENST00000539712 ZNF574Q6ZN55 896 aaPredicted RBP16.64■□□□□ 0.25
DDB1-215ENST00000539712 RCOR2Q8IZ40 523 aa16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms