RNA–Protein interactions for RNA: ENST00000539548.6

CDH13-204, Transcript of cadherin 13, humanhuman

TSL 2

Gene CDH13, Length 2,199 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-204ENST00000539548 INTS10Q9NVR2 710 aaKnown RBP9.64□□□□□ -0.87
CDH13-204ENST00000539548 TMEM9Q9P0T7 183 aa9.64□□□□□ -0.87
CDH13-204ENST00000539548 POLG2Q9UHN1 485 aa9.64□□□□□ -0.87
CDH13-204ENST00000539548 ANAPC2Q9UJX6 822 aa9.64□□□□□ -0.87
CDH13-204ENST00000539548 CRYL1Q9Y2S2 319 aa9.64□□□□□ -0.87
CDH13-204ENST00000539548 SLC45A1Q9Y2W3 748 aa9.64□□□□□ -0.87
CDH13-204ENST00000539548 OAS3Q9Y6K5 1087 aaKnown RBP9.64□□□□□ -0.87
CDH13-204ENST00000539548 DOCK4Q8N1I0 1966 aa9.64□□□□□ -0.87
CDH13-204ENST00000539548 LOC285095A0A1B0GVY8 99 aa9.63□□□□□ -0.87
CDH13-204ENST00000539548 OR51F1A6NGY5 319 aa9.63□□□□□ -0.87
CDH13-204ENST00000539548 LRRC14BA6NHZ5 514 aa9.63□□□□□ -0.87
CDH13-204ENST00000539548 UBXN8O00124 270 aa9.63□□□□□ -0.87
CDH13-204ENST00000539548 CCL22O00626 93 aa9.63□□□□□ -0.87
CDH13-204ENST00000539548 EI24O14681 340 aa9.63□□□□□ -0.87
CDH13-204ENST00000539548 INPP4BO15327 924 aa9.63□□□□□ -0.87
CDH13-204ENST00000539548 SLC4A1P02730 911 aa9.63□□□□□ -0.87
CDH13-204ENST00000539548 CYP11A1P05108 521 aa9.63□□□□□ -0.87
CDH13-204ENST00000539548 LINC00032P0C843 101 aa9.63□□□□□ -0.87
CDH13-204ENST00000539548 PRR35P0CG20 571 aa9.63□□□□□ -0.87
CDH13-204ENST00000539548 CHRM3P20309 590 aa9.63□□□□□ -0.87
CDH13-204ENST00000539548 VARSP26640 1264 aaKnown RBP9.63□□□□□ -0.87
CDH13-204ENST00000539548 ADARB1P78563 741 aaKnown RBP9.63□□□□□ -0.87
CDH13-204ENST00000539548 DSC2Q02487 901 aa9.63□□□□□ -0.87
CDH13-204ENST00000539548 LIPEQ05469 1076 aa9.63□□□□□ -0.87
CDH13-204ENST00000539548 SLC10A7Q0GE19 358 aa9.63□□□□□ -0.87
CDH13-204ENST00000539548 PFKFB4Q16877 469 aa9.63□□□□□ -0.87
CDH13-204ENST00000539548 AASDHQ4L235 1098 aaPredicted RBP9.63□□□□□ -0.87
CDH13-204ENST00000539548 LDLRAD1Q5T700 205 aa9.63□□□□□ -0.87
CDH13-204ENST00000539548 ACBD5Q5T8D3 534 aaPredicted RBP9.63□□□□□ -0.87
CDH13-204ENST00000539548 GPR107Q5VW38 600 aa9.63□□□□□ -0.87
CDH13-204ENST00000539548 SCD5Q86SK9 330 aa9.63□□□□□ -0.87
CDH13-204ENST00000539548 RYBPQ8N488 228 aaPredicted RBP9.63□□□□□ -0.87
CDH13-204ENST00000539548 TEX26Q8N6G2 289 aa9.63□□□□□ -0.87
CDH13-204ENST00000539548 LEMD2Q8NC56 503 aa9.63□□□□□ -0.87
CDH13-204ENST00000539548 NPLOC4Q8TAT6 608 aa9.63□□□□□ -0.87
CDH13-204ENST00000539548 PNPT1Q8TCS8 783 aaKnown RBP9.63□□□□□ -0.87
CDH13-204ENST00000539548 PEX13Q92968 403 aa9.63□□□□□ -0.87
CDH13-204ENST00000539548 EXT2Q93063 718 aa9.63□□□□□ -0.87
CDH13-204ENST00000539548 BORCS5Q969J3 196 aa9.63□□□□□ -0.87
CDH13-204ENST00000539548 TBATAQ96M53 351 aa9.63□□□□□ -0.87
CDH13-204ENST00000539548 DCUN1D5Q9BTE7 237 aa9.63□□□□□ -0.87
CDH13-204ENST00000539548 POLR1BQ9H9Y6 1135 aa9.63□□□□□ -0.87
CDH13-204ENST00000539548 GPBP1L1Q9HC44 474 aaPredicted RBP9.63□□□□□ -0.87
CDH13-204ENST00000539548 FAM105AQ9NUU6 356 aa9.63□□□□□ -0.87
CDH13-204ENST00000539548 PKD2L2Q9NZM6 624 aa9.63□□□□□ -0.87
CDH13-204ENST00000539548 KCTD3Q9Y597 815 aa9.63□□□□□ -0.87
CDH13-204ENST00000539548 NLRC5Q86WI3 1866 aa9.63□□□□□ -0.87
CDH13-204ENST00000539548 C17orf102A2RUQ5 167 aa9.63□□□□□ -0.87
CDH13-204ENST00000539548 ARL5CA6NH57 179 aa9.63□□□□□ -0.87
CDH13-204ENST00000539548 H0YAE9 185 aa9.63□□□□□ -0.87
CDH13-204ENST00000539548 J3KR12 359 aa9.63□□□□□ -0.87
CDH13-204ENST00000539548 CD3EAPO15446 510 aaKnown RBP9.63□□□□□ -0.87
CDH13-204ENST00000539548 CBFA2T3O75081 653 aa9.63□□□□□ -0.87
CDH13-204ENST00000539548 EEDO75530 441 aaKnown RBP9.63□□□□□ -0.87
CDH13-204ENST00000539548 GLP2RO95838 553 aa9.63□□□□□ -0.87
CDH13-204ENST00000539548 LDLRP01130 860 aa9.63□□□□□ -0.87
CDH13-204ENST00000539548 INHBBP09529 407 aa9.63□□□□□ -0.87
CDH13-204ENST00000539548 ATXN1LP0C7T5 689 aaKnown RBP9.63□□□□□ -0.87
CDH13-204ENST00000539548 MTHFD1P11586 935 aaKnown RBP9.63□□□□□ -0.87
CDH13-204ENST00000539548 ZNF37AP17032 561 aaPredicted RBP9.63□□□□□ -0.87
CDH13-204ENST00000539548 ZFP36L2P47974 494 aaKnown RBP9.63□□□□□ -0.87
CDH13-204ENST00000539548 PGFP49763 221 aa9.63□□□□□ -0.87
CDH13-204ENST00000539548 HLCSP50747 726 aa9.63□□□□□ -0.87
CDH13-204ENST00000539548 SLC5A3P53794 718 aa9.63□□□□□ -0.87
CDH13-204ENST00000539548 MAXP61244 160 aa9.63□□□□□ -0.87
CDH13-204ENST00000539548 CLCQ05315 142 aa9.63□□□□□ -0.87
CDH13-204ENST00000539548 LCP2Q13094 533 aa9.63□□□□□ -0.87
CDH13-204ENST00000539548 NFYCQ13952 458 aa9.63□□□□□ -0.87
CDH13-204ENST00000539548 GEN1Q17RS7 908 aa9.63□□□□□ -0.87
CDH13-204ENST00000539548 CCNYL2Q5T2Q4 361 aa9.63□□□□□ -0.87
CDH13-204ENST00000539548 KCTD8Q6ZWB6 473 aa9.63□□□□□ -0.87
CDH13-204ENST00000539548 TRIM74Q86UV6 250 aa9.63□□□□□ -0.87
CDH13-204ENST00000539548 TRIM73Q86UV7 250 aa9.63□□□□□ -0.87
CDH13-204ENST00000539548 LRRTM3Q86VH5 581 aa9.63□□□□□ -0.87
CDH13-204ENST00000539548 ARRDC2Q8TBH0 407 aa9.63□□□□□ -0.87
CDH13-204ENST00000539548 TBC1D15Q8TC07 691 aa9.63□□□□□ -0.87
CDH13-204ENST00000539548 SNRNP27Q8WVK2 155 aaKnown RBP9.63□□□□□ -0.87
CDH13-204ENST00000539548 SLC10A4Q96EP9 437 aa9.63□□□□□ -0.87
CDH13-204ENST00000539548 HMCESQ96FZ2 354 aa9.63□□□□□ -0.87
CDH13-204ENST00000539548 VPS50Q96JG6 964 aa9.63□□□□□ -0.87
CDH13-204ENST00000539548 ZNF599Q96NL3 588 aa9.63□□□□□ -0.87
CDH13-204ENST00000539548 NSUN5Q96P11 429 aaKnown RBP9.63□□□□□ -0.87
CDH13-204ENST00000539548 KCNA7Q96RP8 456 aa9.63□□□□□ -0.87
CDH13-204ENST00000539548 KCTD14Q9BQ13 255 aaPredicted RBP9.63□□□□□ -0.87
CDH13-204ENST00000539548 PAAF1Q9BRP4 392 aa9.63□□□□□ -0.87
CDH13-204ENST00000539548 ALG2Q9H553 416 aa9.63□□□□□ -0.87
CDH13-204ENST00000539548 TBC1D23Q9NUY8 699 aa9.63□□□□□ -0.87
CDH13-204ENST00000539548 GIT1Q9Y2X7 761 aa9.63□□□□□ -0.87
CDH13-204ENST00000539548 MRPL42Q9Y6G3 142 aaKnown RBP9.63□□□□□ -0.87
CDH13-204ENST00000539548 ANKRD36A6QL64 1941 aa9.63□□□□□ -0.87
CDH13-204ENST00000539548 ASPDHA6ND91 283 aa9.62□□□□□ -0.87
CDH13-204ENST00000539548 CASTOR2A6NHX0 329 aa9.62□□□□□ -0.87
CDH13-204ENST00000539548 C9JVG2 144 aa9.62□□□□□ -0.87
CDH13-204ENST00000539548 TNFRSF10BO14763 440 aa9.62□□□□□ -0.87
CDH13-204ENST00000539548 CLIC3O95833 236 aa9.62□□□□□ -0.87
CDH13-204ENST00000539548 MOCS2O96007 188 aaPredicted RBP9.62□□□□□ -0.87
CDH13-204ENST00000539548 RHOQP17081 205 aa9.62□□□□□ -0.87
CDH13-204ENST00000539548 JUNBP17275 347 aaPredicted RBP9.62□□□□□ -0.87
CDH13-204ENST00000539548 ETFBP38117 255 aa9.62□□□□□ -0.87
CDH13-204ENST00000539548 APLP1P51693 650 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms