RNA–Protein interactions for RNA: ENST00000539533.3

PCDHB17P-201, Transcript of protocadherin beta 17 pseudogene, humanhuman

BASIC

Gene PCDHB17P, Length 2,393 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB17P-201ENST00000539533 NPAS3Q8IXF0 933 aa17.05■□□□□ 0.32
PCDHB17P-201ENST00000539533 EFHBQ8N7U6 833 aa17.05■□□□□ 0.32
PCDHB17P-201ENST00000539533 NDNQ99608 321 aa17.05■□□□□ 0.32
PCDHB17P-201ENST00000539533 DCDC2Q9UHG0 476 aa17.05■□□□□ 0.32
PCDHB17P-201ENST00000539533 DNAJC16Q9Y2G8 782 aa17.05■□□□□ 0.32
PCDHB17P-201ENST00000539533 CCDC162PA2VCL2 907 aa17.04■□□□□ 0.32
PCDHB17P-201ENST00000539533 CRTAMO95727 393 aa17.04■□□□□ 0.32
PCDHB17P-201ENST00000539533 GOT2P00505 430 aaKnown RBP17.04■□□□□ 0.32
PCDHB17P-201ENST00000539533 C2P06681 752 aa17.04■□□□□ 0.32
PCDHB17P-201ENST00000539533 WEE1P30291 646 aa17.04■□□□□ 0.32
PCDHB17P-201ENST00000539533 AP1S1P61966 158 aa17.04■□□□□ 0.32
PCDHB17P-201ENST00000539533 USP10Q14694 798 aaKnown RBP17.04■□□□□ 0.32
PCDHB17P-201ENST00000539533 CILP2Q8IUL8 1156 aa17.04■□□□□ 0.32
PCDHB17P-201ENST00000539533 SLC41A1Q8IVJ1 513 aa17.04■□□□□ 0.32
PCDHB17P-201ENST00000539533 CALML6Q8TD86 181 aa17.04■□□□□ 0.32
PCDHB17P-201ENST00000539533 STYXQ8WUJ0 223 aa17.04■□□□□ 0.32
PCDHB17P-201ENST00000539533 FGF13Q92913 245 aa17.04■□□□□ 0.32
PCDHB17P-201ENST00000539533 OTUB2Q96DC9 234 aa17.04■□□□□ 0.32
PCDHB17P-201ENST00000539533 VCX3BQ9H321 246 aa17.04■□□□□ 0.32
PCDHB17P-201ENST00000539533 VCX3AQ9NNX9 186 aa17.04■□□□□ 0.32
PCDHB17P-201ENST00000539533 LMCD1Q9NZU5 365 aa17.04■□□□□ 0.32
PCDHB17P-201ENST00000539533 SLCO3A1Q9UIG8 710 aa17.04■□□□□ 0.32
PCDHB17P-201ENST00000539533 UNC80Q8N2C7 3258 aa17.04■□□□□ 0.32
PCDHB17P-201ENST00000539533 LINC01565O15544 149 aa17.04■□□□□ 0.32
PCDHB17P-201ENST00000539533 PHGDHO43175 533 aaKnown RBP17.04■□□□□ 0.32
PCDHB17P-201ENST00000539533 BNIP3LO60238 219 aa17.04■□□□□ 0.32
PCDHB17P-201ENST00000539533 RNASEH1O60930 286 aaKnown RBP17.04■□□□□ 0.32
PCDHB17P-201ENST00000539533 GLRA3O75311 464 aa17.04■□□□□ 0.32
PCDHB17P-201ENST00000539533 KLHL2O95198 593 aa17.04■□□□□ 0.32
PCDHB17P-201ENST00000539533 PAPLNO95428 1278 aa17.04■□□□□ 0.32
PCDHB17P-201ENST00000539533 GLP2RO95838 553 aa17.04■□□□□ 0.32
PCDHB17P-201ENST00000539533 CD151P48509 253 aa17.04■□□□□ 0.32
PCDHB17P-201ENST00000539533 ZNF140P52738 457 aaPredicted RBP17.04■□□□□ 0.32
PCDHB17P-201ENST00000539533 DHCR24Q15392 516 aa17.04■□□□□ 0.32
PCDHB17P-201ENST00000539533 RALGPS1Q5JS13 557 aa17.04■□□□□ 0.32
PCDHB17P-201ENST00000539533 TMEM215Q68D42 235 aa17.04■□□□□ 0.32
PCDHB17P-201ENST00000539533 DHDDSQ86SQ9 333 aa17.04■□□□□ 0.32
PCDHB17P-201ENST00000539533 ADIPOR2Q86V24 386 aa17.04■□□□□ 0.32
PCDHB17P-201ENST00000539533 RYBPQ8N488 228 aaPredicted RBP17.04■□□□□ 0.32
PCDHB17P-201ENST00000539533 OR4K2Q8NGD2 314 aa17.04■□□□□ 0.32
PCDHB17P-201ENST00000539533 OR6Y1Q8NGX8 325 aa17.04■□□□□ 0.32
PCDHB17P-201ENST00000539533 PYDC1Q8WXC3 89 aa17.04■□□□□ 0.32
PCDHB17P-201ENST00000539533 PEX13Q92968 403 aa17.04■□□□□ 0.32
PCDHB17P-201ENST00000539533 CDKN2AIPNLQ96HQ2 116 aa17.04■□□□□ 0.32
PCDHB17P-201ENST00000539533 EBF3Q9H4W6 596 aa17.04■□□□□ 0.32
PCDHB17P-201ENST00000539533 OCEL1Q9H607 264 aa17.04■□□□□ 0.32
PCDHB17P-201ENST00000539533 STN1Q9H668 368 aaKnown RBP17.04■□□□□ 0.32
PCDHB17P-201ENST00000539533 DUS2Q9NX74 493 aaKnown RBP17.04■□□□□ 0.32
PCDHB17P-201ENST00000539533 TMEM216Q9P0N5 145 aa17.04■□□□□ 0.32
PCDHB17P-201ENST00000539533 HS3ST2Q9Y278 367 aa17.04■□□□□ 0.32
PCDHB17P-201ENST00000539533 FAM95CA0A1B0GW59 222 aa17.03■□□□□ 0.32
PCDHB17P-201ENST00000539533 CCNT2O60583 730 aaKnown RBP17.03■□□□□ 0.32
PCDHB17P-201ENST00000539533 RPP40O75818 363 aaKnown RBP17.03■□□□□ 0.32
PCDHB17P-201ENST00000539533 FGF3P11487 239 aaPredicted RBP17.03■□□□□ 0.32
PCDHB17P-201ENST00000539533 CTPS1P17812 591 aa17.03■□□□□ 0.32
PCDHB17P-201ENST00000539533 FSHRP23945 695 aa17.03■□□□□ 0.32
PCDHB17P-201ENST00000539533 TAF1AQ15573 450 aaPredicted RBP17.03■□□□□ 0.32
PCDHB17P-201ENST00000539533 TCEAL5Q5H9L2 206 aa17.03■□□□□ 0.32
PCDHB17P-201ENST00000539533 KIAA0408Q6ZU52 694 aa17.03■□□□□ 0.32
PCDHB17P-201ENST00000539533 PDSS2Q86YH6 399 aa17.03■□□□□ 0.32
PCDHB17P-201ENST00000539533 SPNS2Q8IVW8 549 aa17.03■□□□□ 0.32
PCDHB17P-201ENST00000539533 POU5F2Q8N7G0 328 aa17.03■□□□□ 0.32
PCDHB17P-201ENST00000539533 ASIC4Q96FT7 647 aa17.03■□□□□ 0.32
PCDHB17P-201ENST00000539533 ZFYVE19Q96K21 471 aa17.03■□□□□ 0.32
PCDHB17P-201ENST00000539533 NLE1Q9NVX2 485 aaPredicted RBP17.03■□□□□ 0.32
PCDHB17P-201ENST00000539533 APOBEC2Q9Y235 224 aaKnown RBP17.03■□□□□ 0.32
PCDHB17P-201ENST00000539533 SLC9A3R1O14745 358 aaPredicted RBP17.03■□□□□ 0.32
PCDHB17P-201ENST00000539533 IGSF6O95976 241 aa17.03■□□□□ 0.32
PCDHB17P-201ENST00000539533 MPOP05164 745 aa17.03■□□□□ 0.32
PCDHB17P-201ENST00000539533 PRSS56P0CW18 603 aa17.03■□□□□ 0.32
PCDHB17P-201ENST00000539533 LEPRP48357 1165 aaKnown RBP17.03■□□□□ 0.32
PCDHB17P-201ENST00000539533 SLC1A6P48664 564 aa17.03■□□□□ 0.32
PCDHB17P-201ENST00000539533 CSRP3P50461 194 aa17.03■□□□□ 0.32
PCDHB17P-201ENST00000539533 COPAP53621 1224 aa17.03■□□□□ 0.32
PCDHB17P-201ENST00000539533 EPHB1P54762 984 aa17.03■□□□□ 0.32
PCDHB17P-201ENST00000539533 BCL2L1Q07817 233 aa17.03■□□□□ 0.32
PCDHB17P-201ENST00000539533 SEMA3AQ14563 771 aa17.03■□□□□ 0.32
PCDHB17P-201ENST00000539533 ZNF460Q14592 562 aa17.03■□□□□ 0.32
PCDHB17P-201ENST00000539533 RBM20Q5T481 1227 aaKnown RBP17.03■□□□□ 0.32
PCDHB17P-201ENST00000539533 ARMC12Q5T9G4 340 aa17.03■□□□□ 0.32
PCDHB17P-201ENST00000539533 ACAD11Q709F0 780 aa17.03■□□□□ 0.32
PCDHB17P-201ENST00000539533 GET4Q7L5D6 327 aaPredicted RBP17.03■□□□□ 0.32
PCDHB17P-201ENST00000539533 CEP97Q8IW35 865 aa17.03■□□□□ 0.32
PCDHB17P-201ENST00000539533 OR2AP1Q8NGE2 309 aa17.03■□□□□ 0.32
PCDHB17P-201ENST00000539533 PIH1D2Q8WWB5 315 aa17.03■□□□□ 0.32
PCDHB17P-201ENST00000539533 VOPP1Q96AW1 172 aa17.03■□□□□ 0.32
PCDHB17P-201ENST00000539533 MRPL38Q96DV4 380 aaKnown RBP17.03■□□□□ 0.32
PCDHB17P-201ENST00000539533 ASB16Q96NS5 453 aa17.03■□□□□ 0.32
PCDHB17P-201ENST00000539533 SPATA16Q9BXB7 569 aa17.03■□□□□ 0.32
PCDHB17P-201ENST00000539533 MARK1Q9P0L2 795 aa17.03■□□□□ 0.32
PCDHB17P-201ENST00000539533 C2orf81A6NN90 581 aa17.02■□□□□ 0.32
PCDHB17P-201ENST00000539533 PLIN3O60664 434 aa17.02■□□□□ 0.32
PCDHB17P-201ENST00000539533 PGLSO95336 258 aa17.02■□□□□ 0.32
PCDHB17P-201ENST00000539533 S1PR4O95977 384 aa17.02■□□□□ 0.32
PCDHB17P-201ENST00000539533 CYP17A1P05093 508 aa17.02■□□□□ 0.32
PCDHB17P-201ENST00000539533 ALPIP09923 528 aa17.02■□□□□ 0.32
PCDHB17P-201ENST00000539533 HADHAP40939 763 aa17.02■□□□□ 0.32
PCDHB17P-201ENST00000539533 CSNK1DP48730 415 aa17.02■□□□□ 0.32
PCDHB17P-201ENST00000539533 ECT2LQ008S8 904 aa17.02■□□□□ 0.32
PCDHB17P-201ENST00000539533 RNF111Q6ZNA4 994 aa17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms