RNA–Protein interactions for RNA: ENST00000539197.5

CCDC7-209, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC7, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-209ENST00000539197 TXNDC8Q6A555 127 aa4.75□□□□□ -1.65
CCDC7-209ENST00000539197 FAM53AQ6NSI3 398 aaPredicted RBP4.75□□□□□ -1.65
CCDC7-209ENST00000539197 TMEM81Q6P7N7 255 aa4.75□□□□□ -1.65
CCDC7-209ENST00000539197 QSOX2Q6ZRP7 698 aa4.75□□□□□ -1.65
CCDC7-209ENST00000539197 SH2D6Q7Z4S9 175 aa4.75□□□□□ -1.65
CCDC7-209ENST00000539197 ZSCAN2Q7Z7L9 614 aaPredicted RBP4.75□□□□□ -1.65
CCDC7-209ENST00000539197 WDR20Q8TBZ3 569 aa4.75□□□□□ -1.65
CCDC7-209ENST00000539197 SLC38A5Q8WUX1 472 aa4.75□□□□□ -1.65
CCDC7-209ENST00000539197 PABPC5Q96DU9 382 aaKnown RBP4.75□□□□□ -1.65
CCDC7-209ENST00000539197 LINGO1Q96FE5 620 aa4.75□□□□□ -1.65
CCDC7-209ENST00000539197 UBXN6Q9BZV1 441 aa4.75□□□□□ -1.65
CCDC7-209ENST00000539197 PLEKHA4Q9H4M7 779 aa4.75□□□□□ -1.65
CCDC7-209ENST00000539197 SEBOXQ9HB31 216 aaPredicted RBP4.75□□□□□ -1.65
CCDC7-209ENST00000539197 POLG2Q9UHN1 485 aa4.75□□□□□ -1.65
CCDC7-209ENST00000539197 PTPRCP08575 1304 aa4.74□□□□□ -1.65
CCDC7-209ENST00000539197 GOLGA6L10A0A0M3HER8 536 aa4.74□□□□□ -1.65
CCDC7-209ENST00000539197 ZNF821O75541 412 aaPredicted RBP4.74□□□□□ -1.65
CCDC7-209ENST00000539197 POLR2CP19387 275 aaPredicted RBP4.74□□□□□ -1.65
CCDC7-209ENST00000539197 AMPHP49418 695 aa4.74□□□□□ -1.65
CCDC7-209ENST00000539197 RUNX1T1Q06455 604 aa4.74□□□□□ -1.65
CCDC7-209ENST00000539197 UBE4AQ14139 1066 aa4.74□□□□□ -1.65
CCDC7-209ENST00000539197 SPAG16Q8N0X2 631 aa4.74□□□□□ -1.65
CCDC7-209ENST00000539197 TBC1D20Q96BZ9 403 aa4.74□□□□□ -1.65
CCDC7-209ENST00000539197 ORAI1Q96D31 301 aa4.74□□□□□ -1.65
CCDC7-209ENST00000539197 MPHOSPH6Q99547 160 aaKnown RBP4.74□□□□□ -1.65
CCDC7-209ENST00000539197 HSF4Q9ULV5 492 aa4.74□□□□□ -1.65
CCDC7-209ENST00000539197 ERVK-11Q9UQG0 969 aa4.74□□□□□ -1.65
CCDC7-209ENST00000539197 C2CD2Q9Y426 696 aa4.74□□□□□ -1.65
CCDC7-209ENST00000539197 A0A0G2JLW4 131 aa4.73□□□□□ -1.65
CCDC7-209ENST00000539197 PSMD14O00487 310 aa4.73□□□□□ -1.65
CCDC7-209ENST00000539197 IRAK2O43187 625 aa4.73□□□□□ -1.65
CCDC7-209ENST00000539197 FAM106CPP0CH98 169 aa4.73□□□□□ -1.65
CCDC7-209ENST00000539197 ERVK-10P10266 1014 aa4.73□□□□□ -1.65
CCDC7-209ENST00000539197 IRF1P10914 325 aa4.73□□□□□ -1.65
CCDC7-209ENST00000539197 AZU1P20160 251 aa4.73□□□□□ -1.65
CCDC7-209ENST00000539197 CSNK2A1P68400 391 aaPredicted RBP4.73□□□□□ -1.65
CCDC7-209ENST00000539197 NAE1Q13564 534 aa4.73□□□□□ -1.65
CCDC7-209ENST00000539197 MORC3Q14149 939 aa4.73□□□□□ -1.65
CCDC7-209ENST00000539197 BRD3Q15059 726 aa4.73□□□□□ -1.65
CCDC7-209ENST00000539197 BRAT1Q6PJG6 821 aa4.73□□□□□ -1.65
CCDC7-209ENST00000539197 SLC22A25Q6T423 547 aa4.73□□□□□ -1.65
CCDC7-209ENST00000539197 SLC46A3Q7Z3Q1 461 aa4.73□□□□□ -1.65
CCDC7-209ENST00000539197 CSNK2A3Q8NEV1 391 aa4.73□□□□□ -1.65
CCDC7-209ENST00000539197 GNB3P16520 340 aa4.72□□□□□ -1.65
CCDC7-209ENST00000539197 TRAPPC10P48553 1259 aa4.72□□□□□ -1.65
CCDC7-209ENST00000539197 CLK1P49759 484 aaKnown RBP4.72□□□□□ -1.65
CCDC7-209ENST00000539197 FOXM1Q08050 763 aa4.72□□□□□ -1.65
CCDC7-209ENST00000539197 ZNF766Q5HY98 468 aa4.72□□□□□ -1.65
CCDC7-209ENST00000539197 TRPT1Q86TN4 253 aaKnown RBP4.72□□□□□ -1.65
CCDC7-209ENST00000539197 BEST3Q8N1M1 668 aa4.72□□□□□ -1.65
CCDC7-209ENST00000539197 ART5Q96L15 291 aa4.72□□□□□ -1.65
CCDC7-209ENST00000539197 FAM110AQ9BQ89 295 aa4.72□□□□□ -1.65
CCDC7-209ENST00000539197 PDZD7Q9H5P4 517 aa4.72□□□□□ -1.65
CCDC7-209ENST00000539197 A0A087X002 238 aa4.71□□□□□ -1.66
CCDC7-209ENST00000539197 CTSVO60911 334 aa4.71□□□□□ -1.66
CCDC7-209ENST00000539197 EGFP01133 1207 aa4.71□□□□□ -1.66
CCDC7-209ENST00000539197 HOXC8P31273 242 aa4.71□□□□□ -1.66
CCDC7-209ENST00000539197 FASLGP48023 281 aa4.71□□□□□ -1.66
CCDC7-209ENST00000539197 CDH15P55291 814 aa4.71□□□□□ -1.66
CCDC7-209ENST00000539197 DSCR10P59022 87 aa4.71□□□□□ -1.66
CCDC7-209ENST00000539197 IRX6P78412 446 aaPredicted RBP4.71□□□□□ -1.66
CCDC7-209ENST00000539197 FOXD4Q12950 439 aaPredicted RBP4.71□□□□□ -1.66
CCDC7-209ENST00000539197 NFIL3Q16649 462 aa4.71□□□□□ -1.66
CCDC7-209ENST00000539197 FRG2Q64ET8 278 aa4.71□□□□□ -1.66
CCDC7-209ENST00000539197 ZNF704Q6ZNC4 412 aaPredicted RBP4.71□□□□□ -1.66
CCDC7-209ENST00000539197 ANO5Q75V66 913 aa4.71□□□□□ -1.66
CCDC7-209ENST00000539197 SENP5Q96HI0 755 aaPredicted RBP4.71□□□□□ -1.66
CCDC7-209ENST00000539197 SLC41A2Q96JW4 573 aa4.71□□□□□ -1.66
CCDC7-209ENST00000539197 LINC00479Q96M42 142 aa4.71□□□□□ -1.66
CCDC7-209ENST00000539197 CDK19Q9BWU1 502 aa4.71□□□□□ -1.66
CCDC7-209ENST00000539197 WDR13Q9H1Z4 485 aa4.71□□□□□ -1.66
CCDC7-209ENST00000539197 SPINT2O43291 252 aa4.7□□□□□ -1.66
CCDC7-209ENST00000539197 SEC14L5O43304 696 aa4.7□□□□□ -1.66
CCDC7-209ENST00000539197 ZNF23P17027 643 aa4.7□□□□□ -1.66
CCDC7-209ENST00000539197 SP100P23497 879 aaPredicted RBP4.7□□□□□ -1.66
CCDC7-209ENST00000539197 EFR3AQ14156 821 aa4.7□□□□□ -1.66
CCDC7-209ENST00000539197 TMEM187Q14656 261 aa4.7□□□□□ -1.66
CCDC7-209ENST00000539197 TECRLQ5HYJ1 363 aa4.7□□□□□ -1.66
CCDC7-209ENST00000539197 LCE3EQ5T5B0 92 aa4.7□□□□□ -1.66
CCDC7-209ENST00000539197 ATG16L1Q676U5 607 aa4.7□□□□□ -1.66
CCDC7-209ENST00000539197 SUSD1Q6UWL2 747 aa4.7□□□□□ -1.66
CCDC7-209ENST00000539197 RBMS3Q6XE24 437 aaKnown RBP4.7□□□□□ -1.66
CCDC7-209ENST00000539197 ADSSL1Q8N142 457 aa4.7□□□□□ -1.66
CCDC7-209ENST00000539197 ZNF689Q96CS4 500 aaPredicted RBP4.7□□□□□ -1.66
CCDC7-209ENST00000539197 OPRPNQ99935 248 aaPredicted RBP4.7□□□□□ -1.66
CCDC7-209ENST00000539197 ERVMER34-1Q9H9K5 563 aa4.7□□□□□ -1.66
CCDC7-209ENST00000539197 PAK5Q9P286 719 aa4.7□□□□□ -1.66
CCDC7-209ENST00000539197 OBSCNQ5VST9 7968 aa4.7□□□□□ -1.66
CCDC7-209ENST00000539197 ZCWPW2A0A1B0GU75 182 aa4.69□□□□□ -1.66
CCDC7-209ENST00000539197 NDUFAF8A1L188 74 aa4.69□□□□□ -1.66
CCDC7-209ENST00000539197 SNAP23O00161 211 aa4.69□□□□□ -1.66
CCDC7-209ENST00000539197 VCYO14598 125 aa4.69□□□□□ -1.66
CCDC7-209ENST00000539197 EIF3DO15371 548 aaKnown RBP eCLIP4.69□□□□□ -1.66
CCDC7-209ENST00000539197 ARHGEF9O43307 516 aa4.69□□□□□ -1.66
CCDC7-209ENST00000539197 ZNF26P17031 533 aaPredicted RBP4.69□□□□□ -1.66
CCDC7-209ENST00000539197 GRK6P43250 576 aa4.69□□□□□ -1.66
CCDC7-209ENST00000539197 TAS2R38P59533 333 aa4.69□□□□□ -1.66
CCDC7-209ENST00000539197 COG7P83436 770 aa4.69□□□□□ -1.66
CCDC7-209ENST00000539197 PLIN5Q00G26 463 aa4.69□□□□□ -1.66
CCDC7-209ENST00000539197 ITGA9Q13797 1035 aa4.69□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms