RNA–Protein interactions for RNA: ENST00000538970.5

VAMP1-206, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 1 (best)

Gene VAMP1, Length 567 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-206ENST00000538970 MYO1FO00160 1098 aa12.44□□□□□ -0.42
VAMP1-206ENST00000538970 MATN3O15232 486 aa12.44□□□□□ -0.42
VAMP1-206ENST00000538970 MAP3K6O95382 1288 aa12.44□□□□□ -0.42
VAMP1-206ENST00000538970 ITGB2P05107 769 aa12.44□□□□□ -0.42
VAMP1-206ENST00000538970 PYGLP06737 847 aa12.44□□□□□ -0.42
VAMP1-206ENST00000538970 THRAP10827 490 aa12.44□□□□□ -0.42
VAMP1-206ENST00000538970 WT1P19544 449 aaPredicted RBP12.44□□□□□ -0.42
VAMP1-206ENST00000538970 GJC1P36383 396 aa12.44□□□□□ -0.42
VAMP1-206ENST00000538970 SSR1P43307 286 aaKnown RBP12.44□□□□□ -0.42
VAMP1-206ENST00000538970 ARSDP51689 593 aa12.44□□□□□ -0.42
VAMP1-206ENST00000538970 LIMK2P53671 638 aa12.44□□□□□ -0.42
VAMP1-206ENST00000538970 EPHB1P54762 984 aa12.44□□□□□ -0.42
VAMP1-206ENST00000538970 ZBED6P86452 979 aa12.44□□□□□ -0.42
VAMP1-206ENST00000538970 FANCCQ00597 558 aa12.44□□□□□ -0.42
VAMP1-206ENST00000538970 TRA2AQ13595 282 aaKnown RBP eCLIP12.44□□□□□ -0.42
VAMP1-206ENST00000538970 LRP8Q14114 963 aa12.44□□□□□ -0.42
VAMP1-206ENST00000538970 HADHQ16836 314 aaKnown RBP12.44□□□□□ -0.42
VAMP1-206ENST00000538970 ATP13A4Q4VNC1 1196 aa12.44□□□□□ -0.42
VAMP1-206ENST00000538970 PYCR3Q53H96 274 aa12.44□□□□□ -0.42
VAMP1-206ENST00000538970 CCDC122Q5T0U0 273 aa12.44□□□□□ -0.42
VAMP1-206ENST00000538970 TMEM164Q5U3C3 297 aa12.44□□□□□ -0.42
VAMP1-206ENST00000538970 NKAIN2Q5VXU1 208 aa12.44□□□□□ -0.42
VAMP1-206ENST00000538970 TIGD7Q6NT04 549 aaPredicted RBP12.44□□□□□ -0.42
VAMP1-206ENST00000538970 MARK2Q7KZI7 788 aaKnown RBP12.44□□□□□ -0.42
VAMP1-206ENST00000538970 NLRP8Q86W28 1048 aa12.44□□□□□ -0.42
VAMP1-206ENST00000538970 CPNE8Q86YQ8 564 aa12.44□□□□□ -0.42
VAMP1-206ENST00000538970 OR4D9Q8NGE8 314 aa12.44□□□□□ -0.42
VAMP1-206ENST00000538970 ARRDC2Q8TBH0 407 aa12.44□□□□□ -0.42
VAMP1-206ENST00000538970 ZNF564Q8TBZ8 553 aaPredicted RBP12.44□□□□□ -0.42
VAMP1-206ENST00000538970 FATE1Q969F0 183 aa12.44□□□□□ -0.42
VAMP1-206ENST00000538970 PMEPA1Q969W9 287 aa12.44□□□□□ -0.42
VAMP1-206ENST00000538970 COX14Q96I36 57 aa12.44□□□□□ -0.42
VAMP1-206ENST00000538970 ZNF670Q9BS34 389 aa12.44□□□□□ -0.42
VAMP1-206ENST00000538970 AMACRQ9UHK6 382 aa12.44□□□□□ -0.42
VAMP1-206ENST00000538970 DNPEPQ9ULA0 475 aa12.44□□□□□ -0.42
VAMP1-206ENST00000538970 CAPN11Q9UMQ6 739 aa12.44□□□□□ -0.42
VAMP1-206ENST00000538970 NENFQ9UMX5 172 aa12.44□□□□□ -0.42
VAMP1-206ENST00000538970 PCDHB11Q9Y5F2 797 aa12.44□□□□□ -0.42
VAMP1-206ENST00000538970 PCDHGA3Q9Y5H0 932 aa12.44□□□□□ -0.42
VAMP1-206ENST00000538970 STMND1H3BQB6 276 aa12.43□□□□□ -0.42
VAMP1-206ENST00000538970 INPP4BO15327 924 aa12.43□□□□□ -0.42
VAMP1-206ENST00000538970 PRLP01236 227 aa12.43□□□□□ -0.42
VAMP1-206ENST00000538970 HLA-DQB2P05538 268 aa12.43□□□□□ -0.42
VAMP1-206ENST00000538970 FGF3P11487 239 aaPredicted RBP12.43□□□□□ -0.42
VAMP1-206ENST00000538970 CES1P23141 567 aa12.43□□□□□ -0.42
VAMP1-206ENST00000538970 CCNCP24863 283 aa12.43□□□□□ -0.42
VAMP1-206ENST00000538970 FASLGP48023 281 aa12.43□□□□□ -0.42
VAMP1-206ENST00000538970 SQSTM1Q13501 440 aa12.43□□□□□ -0.42
VAMP1-206ENST00000538970 NFKBIBQ15653 356 aa12.43□□□□□ -0.42
VAMP1-206ENST00000538970 IFI16Q16666 785 aaKnown RBP12.43□□□□□ -0.42
VAMP1-206ENST00000538970 ANKRD20A8PQ5CZ79 823 aa12.43□□□□□ -0.42
VAMP1-206ENST00000538970 ALKBH5Q6P6C2 394 aaKnown RBP12.43□□□□□ -0.42
VAMP1-206ENST00000538970 LUZP1Q86V48 1076 aa12.43□□□□□ -0.42
VAMP1-206ENST00000538970 GALNT13Q8IUC8 556 aa12.43□□□□□ -0.42
VAMP1-206ENST00000538970 RAVER1Q8IY67 606 aaKnown RBP12.43□□□□□ -0.42
VAMP1-206ENST00000538970 NRSN1Q8IZ57 195 aa12.43□□□□□ -0.42
VAMP1-206ENST00000538970 SFRP1Q8N474 314 aa12.43□□□□□ -0.42
VAMP1-206ENST00000538970 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12.43□□□□□ -0.42
VAMP1-206ENST00000538970 LPCAT1Q8NF37 534 aa12.43□□□□□ -0.42
VAMP1-206ENST00000538970 EXD1Q8NHP7 514 aa12.43□□□□□ -0.42
VAMP1-206ENST00000538970 EXTL1Q92935 676 aa12.43□□□□□ -0.42
VAMP1-206ENST00000538970 FAF2Q96CS3 445 aa12.43□□□□□ -0.42
VAMP1-206ENST00000538970 IQCDQ96DY2 449 aa12.43□□□□□ -0.42
VAMP1-206ENST00000538970 TSGA13Q96PP4 275 aa12.43□□□□□ -0.42
VAMP1-206ENST00000538970 LYSMD1Q96S90 227 aa12.43□□□□□ -0.42
VAMP1-206ENST00000538970 RIOK2Q9BVS4 552 aaKnown RBP12.43□□□□□ -0.42
VAMP1-206ENST00000538970 CBX8Q9HC52 389 aa12.43□□□□□ -0.42
VAMP1-206ENST00000538970 HAUS2Q9NVX0 235 aa12.43□□□□□ -0.42
VAMP1-206ENST00000538970 RBM22Q9NW64 420 aaKnown RBP eCLIP12.43□□□□□ -0.42
VAMP1-206ENST00000538970 KCNK4Q9NYG8 393 aa12.43□□□□□ -0.42
VAMP1-206ENST00000538970 TMEM9Q9P0T7 183 aa12.43□□□□□ -0.42
VAMP1-206ENST00000538970 CHKBQ9Y259 395 aa12.43□□□□□ -0.42
VAMP1-206ENST00000538970 TTLL3Q9Y4R7 772 aa12.43□□□□□ -0.42
VAMP1-206ENST00000538970 PCYT1BQ9Y5K3 369 aaPredicted RBP12.43□□□□□ -0.42
VAMP1-206ENST00000538970 BOD1L1Q8NFC6 3051 aa12.43□□□□□ -0.42
VAMP1-206ENST00000538970 DNAJC6O75061 913 aa12.42□□□□□ -0.42
VAMP1-206ENST00000538970 PROSCO94903 275 aa12.42□□□□□ -0.42
VAMP1-206ENST00000538970 CLDN7O95471 211 aa12.42□□□□□ -0.42
VAMP1-206ENST00000538970 EML2O95834 649 aa12.42□□□□□ -0.42
VAMP1-206ENST00000538970 GYPCP04921 128 aa12.42□□□□□ -0.42
VAMP1-206ENST00000538970 CA4P22748 312 aa12.42□□□□□ -0.42
VAMP1-206ENST00000538970 MPSTP25325 297 aa12.42□□□□□ -0.42
VAMP1-206ENST00000538970 UBASH3AP57075 661 aa12.42□□□□□ -0.42
VAMP1-206ENST00000538970 TAS2R40P59535 323 aa12.42□□□□□ -0.42
VAMP1-206ENST00000538970 RPL26P61254 145 aaKnown RBP12.42□□□□□ -0.42
VAMP1-206ENST00000538970 TPM4P67936 248 aa12.42□□□□□ -0.42
VAMP1-206ENST00000538970 GPLD1P80108 840 aa12.42□□□□□ -0.42
VAMP1-206ENST00000538970 NFKB2Q00653 900 aa12.42□□□□□ -0.42
VAMP1-206ENST00000538970 GBE1Q04446 702 aa12.42□□□□□ -0.42
VAMP1-206ENST00000538970 NIPAL4Q0D2K0 466 aa12.42□□□□□ -0.42
VAMP1-206ENST00000538970 NFATC3Q12968 1075 aa12.42□□□□□ -0.42
VAMP1-206ENST00000538970 PDK2Q15119 407 aa12.42□□□□□ -0.42
VAMP1-206ENST00000538970 XKR5Q6UX68 686 aa12.42□□□□□ -0.42
VAMP1-206ENST00000538970 PQLC3Q8N755 202 aa12.42□□□□□ -0.42
VAMP1-206ENST00000538970 ZSCAN1Q8NBB4 408 aa12.42□□□□□ -0.42
VAMP1-206ENST00000538970 KCTD6Q8NC69 237 aa12.42□□□□□ -0.42
VAMP1-206ENST00000538970 AGBL5Q8NDL9 886 aa12.42□□□□□ -0.42
VAMP1-206ENST00000538970 SLC37A2Q8TED4 501 aa12.42□□□□□ -0.42
VAMP1-206ENST00000538970 LRRN4Q8WUT4 740 aa12.42□□□□□ -0.42
VAMP1-206ENST00000538970 CPLX3Q8WVH0 158 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms