RNA–Protein interactions for RNA: ENST00000538470.2

DDB1-212, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 858 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-212ENST00000538470 TRIM14Q14142 442 aa8.6□□□□□ -1.03
DDB1-212ENST00000538470 C16orf72Q14CZ0 275 aa8.6□□□□□ -1.03
DDB1-212ENST00000538470 PYCR3Q53H96 274 aa8.6□□□□□ -1.03
DDB1-212ENST00000538470 ANKRD20A8PQ5CZ79 823 aa8.6□□□□□ -1.03
DDB1-212ENST00000538470 MANEAQ5SRI9 462 aa8.6□□□□□ -1.03
DDB1-212ENST00000538470 KIAA1614Q5VZ46 1190 aa8.6□□□□□ -1.03
DDB1-212ENST00000538470 DOK6Q6PKX4 331 aa8.6□□□□□ -1.03
DDB1-212ENST00000538470 USP53Q70EK8 1073 aa8.6□□□□□ -1.03
DDB1-212ENST00000538470 H2AFVQ71UI9 128 aa8.6□□□□□ -1.03
DDB1-212ENST00000538470 TMPRSS9Q7Z410 1059 aa8.6□□□□□ -1.03
DDB1-212ENST00000538470 LUZP1Q86V48 1076 aa8.6□□□□□ -1.03
DDB1-212ENST00000538470 VSIG1Q86XK7 387 aa8.6□□□□□ -1.03
DDB1-212ENST00000538470 DTX1Q86Y01 620 aa8.6□□□□□ -1.03
DDB1-212ENST00000538470 SFTPA2Q8IWL1 248 aa8.6□□□□□ -1.03
DDB1-212ENST00000538470 NAGSQ8N159 534 aa8.6□□□□□ -1.03
DDB1-212ENST00000538470 ZSCAN1Q8NBB4 408 aa8.6□□□□□ -1.03
DDB1-212ENST00000538470 KCTD6Q8NC69 237 aa8.6□□□□□ -1.03
DDB1-212ENST00000538470 OR4D9Q8NGE8 314 aa8.6□□□□□ -1.03
DDB1-212ENST00000538470 EXD1Q8NHP7 514 aa8.6□□□□□ -1.03
DDB1-212ENST00000538470 COX14Q96I36 57 aa8.6□□□□□ -1.03
DDB1-212ENST00000538470 CCDC74BQ96LY2 380 aa8.6□□□□□ -1.03
DDB1-212ENST00000538470 NUDT22Q9BRQ3 303 aa8.6□□□□□ -1.03
DDB1-212ENST00000538470 SEMA6CQ9H3T2 930 aa8.6□□□□□ -1.03
DDB1-212ENST00000538470 STN1Q9H668 368 aaKnown RBP8.6□□□□□ -1.03
DDB1-212ENST00000538470 SUDS3Q9H7L9 328 aaPredicted RBP8.6□□□□□ -1.03
DDB1-212ENST00000538470 RMI1Q9H9A7 625 aa8.6□□□□□ -1.03
DDB1-212ENST00000538470 PCDH9Q9HC56 1237 aa8.6□□□□□ -1.03
DDB1-212ENST00000538470 PKD2L2Q9NZM6 624 aa8.6□□□□□ -1.03
DDB1-212ENST00000538470 FOXJ2Q9P0K8 574 aa8.6□□□□□ -1.03
DDB1-212ENST00000538470 CTTNBP2NLQ9P2B4 639 aa8.6□□□□□ -1.03
DDB1-212ENST00000538470 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP8.6□□□□□ -1.03
DDB1-212ENST00000538470 TENM4Q6N022 2769 aa8.59□□□□□ -1.03
DDB1-212ENST00000538470 IGHV1OR21-1A0A087WYE8 117 aa8.59□□□□□ -1.03
DDB1-212ENST00000538470 IGHV5-10-1A0A0J9YXX1 117 aa8.59□□□□□ -1.03
DDB1-212ENST00000538470 RGSL1A5PLK6 1076 aa8.59□□□□□ -1.03
DDB1-212ENST00000538470 B8ZZF3 427 aa8.59□□□□□ -1.03
DDB1-212ENST00000538470 J3QKU1 62 aa8.59□□□□□ -1.03
DDB1-212ENST00000538470 EFSO43281 561 aa8.59□□□□□ -1.03
DDB1-212ENST00000538470 DUX1O43812 170 aa8.59□□□□□ -1.03
DDB1-212ENST00000538470 HLA-DQB2P05538 268 aa8.59□□□□□ -1.03
DDB1-212ENST00000538470 THRAP10827 490 aa8.59□□□□□ -1.03
DDB1-212ENST00000538470 CD1CP29017 333 aa8.59□□□□□ -1.03
DDB1-212ENST00000538470 ALDH4A1P30038 563 aa8.59□□□□□ -1.03
DDB1-212ENST00000538470 CSF2RBP32927 897 aa8.59□□□□□ -1.03
DDB1-212ENST00000538470 GJC1P36383 396 aa8.59□□□□□ -1.03
DDB1-212ENST00000538470 ATP1A2P50993 1020 aa8.59□□□□□ -1.03
DDB1-212ENST00000538470 OR1D5P58170 312 aa8.59□□□□□ -1.03
DDB1-212ENST00000538470 RAB15P59190 212 aa8.59□□□□□ -1.03
DDB1-212ENST00000538470 IFI35P80217 286 aaPredicted RBP8.59□□□□□ -1.03
DDB1-212ENST00000538470 PTSQ03393 145 aa8.59□□□□□ -1.03
DDB1-212ENST00000538470 LY6DQ14210 128 aa8.59□□□□□ -1.03
DDB1-212ENST00000538470 SLC18A3Q16572 532 aa8.59□□□□□ -1.03
DDB1-212ENST00000538470 AMZ1Q400G9 498 aa8.59□□□□□ -1.03
DDB1-212ENST00000538470 HENMT1Q5T8I9 393 aaKnown RBP8.59□□□□□ -1.03
DDB1-212ENST00000538470 CCDC13Q8IYE1 715 aa8.59□□□□□ -1.03
DDB1-212ENST00000538470 SFRP1Q8N474 314 aa8.59□□□□□ -1.03
DDB1-212ENST00000538470 AVL9Q8NBF6 648 aa8.59□□□□□ -1.03
DDB1-212ENST00000538470 AGBL5Q8NDL9 886 aa8.59□□□□□ -1.03
DDB1-212ENST00000538470 LPCAT1Q8NF37 534 aa8.59□□□□□ -1.03
DDB1-212ENST00000538470 ARRDC2Q8TBH0 407 aa8.59□□□□□ -1.03
DDB1-212ENST00000538470 USP7Q93009 1102 aa8.59□□□□□ -1.03
DDB1-212ENST00000538470 SCAMP4Q969E2 229 aa8.59□□□□□ -1.03
DDB1-212ENST00000538470 TAAR9Q96RI9 348 aa8.59□□□□□ -1.03
DDB1-212ENST00000538470 HERPUD2Q9BSE4 406 aa8.59□□□□□ -1.03
DDB1-212ENST00000538470 RIOK2Q9BVS4 552 aaKnown RBP8.59□□□□□ -1.03
DDB1-212ENST00000538470 DDA1Q9BW61 102 aa8.59□□□□□ -1.03
DDB1-212ENST00000538470 SEMA4CQ9C0C4 833 aa8.59□□□□□ -1.03
DDB1-212ENST00000538470 EPB41L1Q9H4G0 881 aa8.59□□□□□ -1.03
DDB1-212ENST00000538470 RDH14Q9HBH5 336 aa8.59□□□□□ -1.03
DDB1-212ENST00000538470 RBM22Q9NW64 420 aaKnown RBP eCLIP8.59□□□□□ -1.03
DDB1-212ENST00000538470 KCNK4Q9NYG8 393 aa8.59□□□□□ -1.03
DDB1-212ENST00000538470 NFKBIL1Q9UBC1 381 aaPredicted RBP8.59□□□□□ -1.03
DDB1-212ENST00000538470 CD84Q9UIB8 345 aa8.59□□□□□ -1.03
DDB1-212ENST00000538470 CHKBQ9Y259 395 aa8.59□□□□□ -1.03
DDB1-212ENST00000538470 TTLL3Q9Y4R7 772 aa8.59□□□□□ -1.03
DDB1-212ENST00000538470 PCDHGA4Q9Y5G9 962 aa8.59□□□□□ -1.03
DDB1-212ENST00000538470 C1orf232A0A0U1RR37 186 aa8.58□□□□□ -1.04
DDB1-212ENST00000538470 SSU72P8A0A1W2PR75 194 aa8.58□□□□□ -1.04
DDB1-212ENST00000538470 B4E171 279 aa8.58□□□□□ -1.04
DDB1-212ENST00000538470 GPR89AB7ZAQ6 455 aa8.58□□□□□ -1.04
DDB1-212ENST00000538470 PRLP01236 227 aa8.58□□□□□ -1.04
DDB1-212ENST00000538470 TMEM253P0C7T8 217 aa8.58□□□□□ -1.04
DDB1-212ENST00000538470 GPR89BP0CG08 455 aa8.58□□□□□ -1.04
DDB1-212ENST00000538470 SFTPCP11686 197 aa8.58□□□□□ -1.04
DDB1-212ENST00000538470 CASP14P31944 242 aa8.58□□□□□ -1.04
DDB1-212ENST00000538470 CSTF2P33240 577 aaKnown RBP eCLIP8.58□□□□□ -1.04
DDB1-212ENST00000538470 TSPAN7P41732 249 aa8.58□□□□□ -1.04
DDB1-212ENST00000538470 POLD2P49005 469 aa8.58□□□□□ -1.04
DDB1-212ENST00000538470 SPINT3P49223 89 aa8.58□□□□□ -1.04
DDB1-212ENST00000538470 EPHA4P54764 986 aa8.58□□□□□ -1.04
DDB1-212ENST00000538470 DCDC1P59894 354 aa8.58□□□□□ -1.04
DDB1-212ENST00000538470 PPIDQ08752 370 aaKnown RBP8.58□□□□□ -1.04
DDB1-212ENST00000538470 PTPRRQ15256 657 aa8.58□□□□□ -1.04
DDB1-212ENST00000538470 TGIF1Q15583 401 aa8.58□□□□□ -1.04
DDB1-212ENST00000538470 SLC14A2Q15849 920 aa8.58□□□□□ -1.04
DDB1-212ENST00000538470 ZNF569Q5MCW4 686 aa8.58□□□□□ -1.04
DDB1-212ENST00000538470 CHCHD2P9Q5T1J5 151 aaPredicted RBP8.58□□□□□ -1.04
DDB1-212ENST00000538470 PDPK2PQ6A1A2 396 aa8.58□□□□□ -1.04
DDB1-212ENST00000538470 TMEM71Q6P5X7 295 aa8.58□□□□□ -1.04
DDB1-212ENST00000538470 ZNF574Q6ZN55 896 aaPredicted RBP8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms