RNA–Protein interactions for RNA: ENST00000538235.2

CHFR-216, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 687 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-216ENST00000538235 MROH6A6NGR9 719 aa13.01□□□□□ -0.33
CHFR-216ENST00000538235 OR51F1A6NGY5 319 aa13.01□□□□□ -0.33
CHFR-216ENST00000538235 GOLGA8MH3BSY2 632 aa13.01□□□□□ -0.33
CHFR-216ENST00000538235 UGT1A9O60656 530 aa13.01□□□□□ -0.33
CHFR-216ENST00000538235 MTX2O75431 263 aa13.01□□□□□ -0.33
CHFR-216ENST00000538235 ZNF189O75820 626 aaPredicted RBP13.01□□□□□ -0.33
CHFR-216ENST00000538235 ECEL1O95672 775 aa13.01□□□□□ -0.33
CHFR-216ENST00000538235 CEACAM5P06731 702 aa13.01□□□□□ -0.33
CHFR-216ENST00000538235 GOLGA6DP0CG33 693 aa13.01□□□□□ -0.33
CHFR-216ENST00000538235 NME1P15531 152 aaKnown RBP13.01□□□□□ -0.33
CHFR-216ENST00000538235 UGT1A6P19224 532 aa13.01□□□□□ -0.33
CHFR-216ENST00000538235 UGT1A1P22309 533 aa13.01□□□□□ -0.33
CHFR-216ENST00000538235 UGT1A4P22310 534 aa13.01□□□□□ -0.33
CHFR-216ENST00000538235 PSMA3P25788 255 aa13.01□□□□□ -0.33
CHFR-216ENST00000538235 UGT1A3P35503 534 aa13.01□□□□□ -0.33
CHFR-216ENST00000538235 UGT1A5P35504 534 aa13.01□□□□□ -0.33
CHFR-216ENST00000538235 MAGEA3P43357 314 aa13.01□□□□□ -0.33
CHFR-216ENST00000538235 C21orf59P57076 290 aa13.01□□□□□ -0.33
CHFR-216ENST00000538235 TMPRSS15P98073 1019 aa13.01□□□□□ -0.33
CHFR-216ENST00000538235 TEAD4Q15561 434 aa13.01□□□□□ -0.33
CHFR-216ENST00000538235 TAF1AQ15573 450 aaPredicted RBP13.01□□□□□ -0.33
CHFR-216ENST00000538235 CHRNA6Q15825 494 aa13.01□□□□□ -0.33
CHFR-216ENST00000538235 ATP13A5Q4VNC0 1218 aa13.01□□□□□ -0.33
CHFR-216ENST00000538235 XKR5Q6UX68 686 aa13.01□□□□□ -0.33
CHFR-216ENST00000538235 FAM151BQ6UXP7 276 aa13.01□□□□□ -0.33
CHFR-216ENST00000538235 ADAMTSL4Q6UY14 1074 aa13.01□□□□□ -0.33
CHFR-216ENST00000538235 RABEPKQ7Z6M1 372 aa13.01□□□□□ -0.33
CHFR-216ENST00000538235 NRSN1Q8IZ57 195 aa13.01□□□□□ -0.33
CHFR-216ENST00000538235 SLC25A45Q8N413 288 aa13.01□□□□□ -0.33
CHFR-216ENST00000538235 OR13J1Q8NGT2 312 aa13.01□□□□□ -0.33
CHFR-216ENST00000538235 CCL4L1Q8NHW4 92 aa13.01□□□□□ -0.33
CHFR-216ENST00000538235 SAP25Q8TEE9 199 aa13.01□□□□□ -0.33
CHFR-216ENST00000538235 ZNF592Q92610 1267 aa13.01□□□□□ -0.33
CHFR-216ENST00000538235 TRIM44Q96DX7 344 aaPredicted RBP13.01□□□□□ -0.33
CHFR-216ENST00000538235 FERMT1Q9BQL6 677 aa13.01□□□□□ -0.33
CHFR-216ENST00000538235 LRRC61Q9BV99 259 aa13.01□□□□□ -0.33
CHFR-216ENST00000538235 CLPBQ9H078 707 aa13.01□□□□□ -0.33
CHFR-216ENST00000538235 FAM83DQ9H4H8 585 aa13.01□□□□□ -0.33
CHFR-216ENST00000538235 WDR26Q9H7D7 661 aa13.01□□□□□ -0.33
CHFR-216ENST00000538235 SUDS3Q9H7L9 328 aaPredicted RBP13.01□□□□□ -0.33
CHFR-216ENST00000538235 UGT1A7Q9HAW7 530 aa13.01□□□□□ -0.33
CHFR-216ENST00000538235 UGT1A10Q9HAW8 530 aa13.01□□□□□ -0.33
CHFR-216ENST00000538235 UGT1A8Q9HAW9 530 aa13.01□□□□□ -0.33
CHFR-216ENST00000538235 PLAC1Q9HBJ0 212 aa13.01□□□□□ -0.33
CHFR-216ENST00000538235 TMEM9BQ9NQ34 198 aa13.01□□□□□ -0.33
CHFR-216ENST00000538235 GDF3Q9NR23 364 aa13.01□□□□□ -0.33
CHFR-216ENST00000538235 SYBUQ9NX95 663 aa13.01□□□□□ -0.33
CHFR-216ENST00000538235 GOLGA6AQ9NYA3 693 aa13.01□□□□□ -0.33
CHFR-216ENST00000538235 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP13.01□□□□□ -0.33
CHFR-216ENST00000538235 PKD2L2Q9NZM6 624 aa13.01□□□□□ -0.33
CHFR-216ENST00000538235 TMEM98Q9Y2Y6 226 aa13.01□□□□□ -0.33
CHFR-216ENST00000538235 GOLGA4Q13439 2230 aaKnown RBP13.01□□□□□ -0.33
CHFR-216ENST00000538235 RP1P56715 2156 aa13□□□□□ -0.33
CHFR-216ENST00000538235 GOLGA6L10A0A0M3HER8 536 aa13□□□□□ -0.33
CHFR-216ENST00000538235 ERI2A8K979 691 aaKnown RBP13□□□□□ -0.33
CHFR-216ENST00000538235 DNALI1O14645 258 aaPredicted RBP13□□□□□ -0.33
CHFR-216ENST00000538235 CASC3O15234 703 aaKnown RBP13□□□□□ -0.33
CHFR-216ENST00000538235 PIAS2O75928 621 aa13□□□□□ -0.33
CHFR-216ENST00000538235 URI1O94763 535 aaPredicted RBP13□□□□□ -0.33
CHFR-216ENST00000538235 F7P08709 466 aaPredicted RBP13□□□□□ -0.33
CHFR-216ENST00000538235 MYCLP1P12525 358 aaPredicted RBP13□□□□□ -0.33
CHFR-216ENST00000538235 TSHRP16473 764 aa13□□□□□ -0.33
CHFR-216ENST00000538235 MGAT1P26572 445 aa13□□□□□ -0.33
CHFR-216ENST00000538235 ARNTP27540 789 aa13□□□□□ -0.33
CHFR-216ENST00000538235 TEAD1P28347 426 aa13□□□□□ -0.33
CHFR-216ENST00000538235 GPR1P46091 355 aa13□□□□□ -0.33
CHFR-216ENST00000538235 RPL21P46778 160 aaKnown RBP13□□□□□ -0.33
CHFR-216ENST00000538235 LIMK1P53667 647 aa13□□□□□ -0.33
CHFR-216ENST00000538235 LMNB2Q03252 620 aa13□□□□□ -0.33
CHFR-216ENST00000538235 OVGP1Q12889 678 aa13□□□□□ -0.33
CHFR-216ENST00000538235 SEPT6Q14141 434 aa13□□□□□ -0.33
CHFR-216ENST00000538235 SEMA3AQ14563 771 aa13□□□□□ -0.33
CHFR-216ENST00000538235 SMAD1Q15797 465 aaKnown RBP13□□□□□ -0.33
CHFR-216ENST00000538235 RSPO4Q2I0M5 234 aaPredicted RBP13□□□□□ -0.33
CHFR-216ENST00000538235 UAP1L1Q3KQV9 507 aa13□□□□□ -0.33
CHFR-216ENST00000538235 MSS51Q4VC12 460 aa13□□□□□ -0.33
CHFR-216ENST00000538235 DOK6Q6PKX4 331 aa13□□□□□ -0.33
CHFR-216ENST00000538235 PIP4P1Q86T03 277 aa13□□□□□ -0.33
CHFR-216ENST00000538235 PARGQ86W56 976 aa13□□□□□ -0.33
CHFR-216ENST00000538235 SPNS2Q8IVW8 549 aa13□□□□□ -0.33
CHFR-216ENST00000538235 PHACTR4Q8IZ21 702 aa13□□□□□ -0.33
CHFR-216ENST00000538235 NDUFAF2Q8N183 169 aa13□□□□□ -0.33
CHFR-216ENST00000538235 NOA1Q8NC60 698 aaKnown RBP13□□□□□ -0.33
CHFR-216ENST00000538235 BAHD1Q8TBE0 780 aaPredicted RBP13□□□□□ -0.33
CHFR-216ENST00000538235 BRSK1Q8TDC3 778 aa13□□□□□ -0.33
CHFR-216ENST00000538235 C1QTNF7Q9BXJ2 289 aa13□□□□□ -0.33
CHFR-216ENST00000538235 ERVMER34-1Q9H9K5 563 aa13□□□□□ -0.33
CHFR-216ENST00000538235 TM7SF3Q9NS93 570 aa13□□□□□ -0.33
CHFR-216ENST00000538235 HACD3Q9P035 362 aa13□□□□□ -0.33
CHFR-216ENST00000538235 LY6G6EA0A0G2JKS1 128 aa12.99□□□□□ -0.33
CHFR-216ENST00000538235 BHMG1C9JSJ3 638 aaPredicted RBP12.99□□□□□ -0.33
CHFR-216ENST00000538235 CCDC188H7C350 402 aa12.99□□□□□ -0.33
CHFR-216ENST00000538235 TRIM38O00635 465 aa12.99□□□□□ -0.33
CHFR-216ENST00000538235 GIPC1O14908 333 aa12.99□□□□□ -0.33
CHFR-216ENST00000538235 SGTAO43765 313 aa12.99□□□□□ -0.33
CHFR-216ENST00000538235 DNAJC6O75061 913 aa12.99□□□□□ -0.33
CHFR-216ENST00000538235 CBFA2T3O75081 653 aa12.99□□□□□ -0.33
CHFR-216ENST00000538235 CER1O95813 267 aa12.99□□□□□ -0.33
CHFR-216ENST00000538235 CSF2P04141 144 aa12.99□□□□□ -0.33
CHFR-216ENST00000538235 SYPP08247 313 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms