RNA–Protein interactions for RNA: ENST00000537981.5

RTN3-208, Transcript of reticulon 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTN3, Length 2,532 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-208ENST00000537981 LACC1Q8IV20 430 aa10.66□□□□□ -0.7
RTN3-208ENST00000537981 TMEM151AQ8N4L1 468 aa10.66□□□□□ -0.7
RTN3-208ENST00000537981 PROX1Q92786 737 aa10.66□□□□□ -0.7
RTN3-208ENST00000537981 MARC2Q969Z3 335 aa10.66□□□□□ -0.7
RTN3-208ENST00000537981 CDCA5Q96FF9 252 aa10.66□□□□□ -0.7
RTN3-208ENST00000537981 SLC30A3Q99726 388 aa10.66□□□□□ -0.7
RTN3-208ENST00000537981 ROGDIQ9GZN7 287 aa10.66□□□□□ -0.7
RTN3-208ENST00000537981 TUFT1Q9NNX1 390 aa10.66□□□□□ -0.7
RTN3-208ENST00000537981 OXSMQ9NWU1 459 aa10.66□□□□□ -0.7
RTN3-208ENST00000537981 MAN2B2Q9Y2E5 1009 aa10.66□□□□□ -0.7
RTN3-208ENST00000537981 LY75O60449 1722 aa10.66□□□□□ -0.7
RTN3-208ENST00000537981 A0A096LPK6 155 aa10.66□□□□□ -0.7
RTN3-208ENST00000537981 ARPC2O15144 300 aa10.66□□□□□ -0.7
RTN3-208ENST00000537981 ALBP02768 609 aa10.66□□□□□ -0.7
RTN3-208ENST00000537981 CYP2A7P20853 494 aa10.66□□□□□ -0.7
RTN3-208ENST00000537981 CD6P30203 668 aa10.66□□□□□ -0.7
RTN3-208ENST00000537981 AVPR1AP37288 418 aa10.66□□□□□ -0.7
RTN3-208ENST00000537981 SOX9P48436 509 aa10.66□□□□□ -0.7
RTN3-208ENST00000537981 B2MP61769 119 aa10.66□□□□□ -0.7
RTN3-208ENST00000537981 CUL2Q13617 745 aa10.66□□□□□ -0.7
RTN3-208ENST00000537981 TFDP2Q14188 446 aa10.66□□□□□ -0.7
RTN3-208ENST00000537981 ZNF460Q14592 562 aa10.66□□□□□ -0.7
RTN3-208ENST00000537981 CBX2Q14781 532 aaPredicted RBP10.66□□□□□ -0.7
RTN3-208ENST00000537981 ZMYND11Q15326 602 aa10.66□□□□□ -0.7
RTN3-208ENST00000537981 INSCQ1MX18 579 aa10.66□□□□□ -0.7
RTN3-208ENST00000537981 BCL7AQ4VC05 210 aa10.66□□□□□ -0.7
RTN3-208ENST00000537981 LAIR1Q6GTX8 287 aa10.66□□□□□ -0.7
RTN3-208ENST00000537981 TUBA3EQ6PEY2 450 aa10.66□□□□□ -0.7
RTN3-208ENST00000537981 UBQLNLQ8IYU4 475 aa10.66□□□□□ -0.7
RTN3-208ENST00000537981 PELI3Q8N2H9 469 aa10.66□□□□□ -0.7
RTN3-208ENST00000537981 LILRB2Q8N423 598 aa10.66□□□□□ -0.7
RTN3-208ENST00000537981 CPA6Q8N4T0 437 aa10.66□□□□□ -0.7
RTN3-208ENST00000537981 CCNYL1Q8N7R7 359 aa10.66□□□□□ -0.7
RTN3-208ENST00000537981 PIK3C3Q8NEB9 887 aa10.66□□□□□ -0.7
RTN3-208ENST00000537981 CNIH3Q8TBE1 160 aa10.66□□□□□ -0.7
RTN3-208ENST00000537981 PNPT1Q8TCS8 783 aaKnown RBP10.66□□□□□ -0.7
RTN3-208ENST00000537981 URGCPQ8TCY9 931 aa10.66□□□□□ -0.7
RTN3-208ENST00000537981 NSUN6Q8TEA1 469 aaKnown RBP10.66□□□□□ -0.7
RTN3-208ENST00000537981 TFAP2BQ92481 460 aa10.66□□□□□ -0.7
RTN3-208ENST00000537981 TOP1MTQ969P6 601 aa10.66□□□□□ -0.7
RTN3-208ENST00000537981 MYRFLQ96LU7 910 aa10.66□□□□□ -0.7
RTN3-208ENST00000537981 ZNF300Q96RE9 604 aaPredicted RBP10.66□□□□□ -0.7
RTN3-208ENST00000537981 C17orf62Q9BQA9 187 aa10.66□□□□□ -0.7
RTN3-208ENST00000537981 ZNF408Q9H9D4 720 aa10.66□□□□□ -0.7
RTN3-208ENST00000537981 SMURF2Q9HAU4 748 aa10.66□□□□□ -0.7
RTN3-208ENST00000537981 TMLHEQ9NVH6 421 aa10.66□□□□□ -0.7
RTN3-208ENST00000537981 ARHGAP28Q9P2N2 729 aa10.66□□□□□ -0.7
RTN3-208ENST00000537981 SARDHQ9UL12 918 aa10.66□□□□□ -0.7
RTN3-208ENST00000537981 AP3M1Q9Y2T2 418 aa10.66□□□□□ -0.7
RTN3-208ENST00000537981 ZNF541Q9H0D2 1346 aa10.66□□□□□ -0.7
RTN3-208ENST00000537981 SPATA31C2B4DYI2 1134 aa10.65□□□□□ -0.7
RTN3-208ENST00000537981 ERVV-1B6SEH8 477 aa10.65□□□□□ -0.7
RTN3-208ENST00000537981 TFECO14948 347 aaPredicted RBP10.65□□□□□ -0.7
RTN3-208ENST00000537981 SHOXO15266 292 aa10.65□□□□□ -0.7
RTN3-208ENST00000537981 NBNO60934 754 aa10.65□□□□□ -0.7
RTN3-208ENST00000537981 SRP72O76094 671 aaKnown RBP10.65□□□□□ -0.7
RTN3-208ENST00000537981 LRIG2O94898 1065 aa10.65□□□□□ -0.7
RTN3-208ENST00000537981 CHRNA1P02708 482 aa10.65□□□□□ -0.7
RTN3-208ENST00000537981 CLEC2LP0C7M8 214 aa10.65□□□□□ -0.7
RTN3-208ENST00000537981 CFL1P23528 166 aaKnown RBP10.65□□□□□ -0.7
RTN3-208ENST00000537981 IL32P24001 234 aa10.65□□□□□ -0.7
RTN3-208ENST00000537981 RFC2P35250 354 aa10.65□□□□□ -0.7
RTN3-208ENST00000537981 SERPINH1P50454 418 aaKnown RBP10.65□□□□□ -0.7
RTN3-208ENST00000537981 PRELPP51888 382 aa10.65□□□□□ -0.7
RTN3-208ENST00000537981 CDH6P55285 790 aa10.65□□□□□ -0.7
RTN3-208ENST00000537981 GTF2BQ00403 316 aa10.65□□□□□ -0.7
RTN3-208ENST00000537981 FCHO2Q0JRZ9 810 aa10.65□□□□□ -0.7
RTN3-208ENST00000537981 SPP2Q13103 211 aa10.65□□□□□ -0.7
RTN3-208ENST00000537981 PIGHQ14442 188 aaPredicted RBP10.65□□□□□ -0.7
RTN3-208ENST00000537981 SEZ6Q53EL9 994 aa10.65□□□□□ -0.7
RTN3-208ENST00000537981 FSTL4Q6MZW2 842 aa10.65□□□□□ -0.7
RTN3-208ENST00000537981 GPAT2Q6NUI2 795 aa10.65□□□□□ -0.7
RTN3-208ENST00000537981 C8orf82Q6P1X6 216 aaPredicted RBP10.65□□□□□ -0.7
RTN3-208ENST00000537981 CNSTQ6PJW8 725 aa10.65□□□□□ -0.7
RTN3-208ENST00000537981 MOXD1Q6UVY6 613 aa10.65□□□□□ -0.7
RTN3-208ENST00000537981 NRARPQ7Z6K4 114 aa10.65□□□□□ -0.7
RTN3-208ENST00000537981 PARP16Q8N5Y8 322 aa10.65□□□□□ -0.7
RTN3-208ENST00000537981 LINC00469Q8N7U9 141 aa10.65□□□□□ -0.7
RTN3-208ENST00000537981 KDM1BQ8NB78 822 aa10.65□□□□□ -0.7
RTN3-208ENST00000537981 MCFD2Q8NI22 146 aa10.65□□□□□ -0.7
RTN3-208ENST00000537981 TRPM4Q8TD43 1214 aa10.65□□□□□ -0.7
RTN3-208ENST00000537981 TRAF3IP1Q8TDR0 691 aaPredicted RBP10.65□□□□□ -0.7
RTN3-208ENST00000537981 PHF10Q8WUB8 498 aaKnown RBP10.65□□□□□ -0.7
RTN3-208ENST00000537981 PCNPQ8WW12 178 aaKnown RBP10.65□□□□□ -0.7
RTN3-208ENST00000537981 ARNTL2Q8WYA1 636 aa10.65□□□□□ -0.7
RTN3-208ENST00000537981 DPF3Q92784 378 aa10.65□□□□□ -0.7
RTN3-208ENST00000537981 APBB2Q92870 758 aa10.65□□□□□ -0.7
RTN3-208ENST00000537981 DACT3Q96B18 629 aaPredicted RBP10.65□□□□□ -0.7
RTN3-208ENST00000537981 CERS2Q96G23 380 aa10.65□□□□□ -0.7
RTN3-208ENST00000537981 PAWRQ96IZ0 340 aaKnown RBP10.65□□□□□ -0.7
RTN3-208ENST00000537981 ASB2Q96Q27 587 aa10.65□□□□□ -0.7
RTN3-208ENST00000537981 NMRAL1Q9HBL8 299 aa10.65□□□□□ -0.7
RTN3-208ENST00000537981 CPNE7Q9UBL6 633 aa10.65□□□□□ -0.7
RTN3-208ENST00000537981 FBXO5Q9UKT4 447 aa10.65□□□□□ -0.7
RTN3-208ENST00000537981 IGKV6D-41A0A0C4DH26 115 aa10.65□□□□□ -0.7
RTN3-208ENST00000537981 CIB4A0PJX0 185 aa10.65□□□□□ -0.7
RTN3-208ENST00000537981 NEMP2A6NFY4 417 aa10.65□□□□□ -0.7
RTN3-208ENST00000537981 EVPLLA8MZ36 301 aa10.65□□□□□ -0.7
RTN3-208ENST00000537981 OGTO15294 1046 aa10.65□□□□□ -0.7
RTN3-208ENST00000537981 EPN2O95208 641 aa10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms