RNA–Protein interactions for RNA: ENST00000537606.5

SNX17-210, Transcript of sorting nexin 17, humanhuman

TSL 2 BASIC

Gene SNX17, Length 2,400 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-210ENST00000537606 FPGSQ05932 587 aa17.4■□□□□ 0.38
SNX17-210ENST00000537606 PLEKHG6Q3KR16 790 aa17.4■□□□□ 0.38
SNX17-210ENST00000537606 TRIM68Q6AZZ1 485 aa17.4■□□□□ 0.38
SNX17-210ENST00000537606 TMEM25Q86YD3 366 aa17.4■□□□□ 0.38
SNX17-210ENST00000537606 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP17.4■□□□□ 0.38
SNX17-210ENST00000537606 CCDC124Q96CT7 223 aaKnown RBP17.4■□□□□ 0.38
SNX17-210ENST00000537606 MYO19Q96H55 970 aa17.4■□□□□ 0.38
SNX17-210ENST00000537606 RSRC1Q96IZ7 334 aaKnown RBP17.4■□□□□ 0.38
SNX17-210ENST00000537606 GPR21Q99679 349 aa17.4■□□□□ 0.38
SNX17-210ENST00000537606 C17orf80Q9BSJ5 609 aa17.4■□□□□ 0.38
SNX17-210ENST00000537606 INTS10Q9NVR2 710 aaKnown RBP17.4■□□□□ 0.38
SNX17-210ENST00000537606 KIAA1522Q9P206 1035 aaPredicted RBP17.4■□□□□ 0.38
SNX17-210ENST00000537606 PRKAG2Q9UGJ0 569 aa17.4■□□□□ 0.38
SNX17-210ENST00000537606 PACSIN3Q9UKS6 424 aa17.4■□□□□ 0.38
SNX17-210ENST00000537606 IKZF3Q9UKT9 509 aa17.4■□□□□ 0.38
SNX17-210ENST00000537606 ZNF711Q9Y462 761 aa17.4■□□□□ 0.38
SNX17-210ENST00000537606 NIPSNAP2O75323 286 aa17.39■□□□□ 0.37
SNX17-210ENST00000537606 CIB2O75838 187 aa17.39■□□□□ 0.37
SNX17-210ENST00000537606 SUPT7LO94864 414 aa17.39■□□□□ 0.37
SNX17-210ENST00000537606 EN2P19622 333 aaPredicted RBP17.39■□□□□ 0.37
SNX17-210ENST00000537606 ITGAXP20702 1163 aa17.39■□□□□ 0.37
SNX17-210ENST00000537606 CDH13P55290 713 aa17.39■□□□□ 0.37
SNX17-210ENST00000537606 NTHL1P78549 312 aa17.39■□□□□ 0.37
SNX17-210ENST00000537606 CPXM2Q8N436 756 aa17.39■□□□□ 0.37
SNX17-210ENST00000537606 PIH1D2Q8WWB5 315 aa17.39■□□□□ 0.37
SNX17-210ENST00000537606 MYLIPQ8WY64 445 aa17.39■□□□□ 0.37
SNX17-210ENST00000537606 CMTM5Q96DZ9 223 aa17.39■□□□□ 0.37
SNX17-210ENST00000537606 CCDC97Q96F63 343 aaPredicted RBP17.39■□□□□ 0.37
SNX17-210ENST00000537606 CNDP1Q96KN2 507 aa17.39■□□□□ 0.37
SNX17-210ENST00000537606 BIRC8Q96P09 236 aa17.39■□□□□ 0.37
SNX17-210ENST00000537606 CATSPER2Q96P56 530 aa17.39■□□□□ 0.37
SNX17-210ENST00000537606 IQCF5A8MTL0 148 aa17.39■□□□□ 0.37
SNX17-210ENST00000537606 UBXN8O00124 270 aa17.39■□□□□ 0.37
SNX17-210ENST00000537606 ZNF821O75541 412 aaPredicted RBP17.39■□□□□ 0.37
SNX17-210ENST00000537606 PGLSO95336 258 aa17.39■□□□□ 0.37
SNX17-210ENST00000537606 SIX3O95343 332 aaPredicted RBP17.39■□□□□ 0.37
SNX17-210ENST00000537606 HLA-FP30511 346 aa17.39■□□□□ 0.37
SNX17-210ENST00000537606 BMPR1AP36894 532 aa17.39■□□□□ 0.37
SNX17-210ENST00000537606 CLCN4P51793 760 aa17.39■□□□□ 0.37
SNX17-210ENST00000537606 PPIGQ13427 754 aaKnown RBP eCLIP17.39■□□□□ 0.371e-6■■■□□ 14.9
SNX17-210ENST00000537606 SLC5A9Q2M3M2 681 aa17.39■□□□□ 0.37
SNX17-210ENST00000537606 NET1Q7Z628 596 aaPredicted RBP17.39■□□□□ 0.37
SNX17-210ENST00000537606 DEFB107AQ8IZN7 70 aa17.39■□□□□ 0.37
SNX17-210ENST00000537606 FIBINQ8TAL6 211 aa17.39■□□□□ 0.37
SNX17-210ENST00000537606 RAD9AQ99638 391 aa17.39■□□□□ 0.37
SNX17-210ENST00000537606 HCFC2Q9Y5Z7 792 aa17.39■□□□□ 0.37
SNX17-210ENST00000537606 SLC4A7Q9Y6M7 1214 aa17.39■□□□□ 0.37
SNX17-210ENST00000537606 UBFD1O14562 309 aaKnown RBP17.38■□□□□ 0.37
SNX17-210ENST00000537606 HSPA8P11142 646 aaKnown RBP17.38■□□□□ 0.37
SNX17-210ENST00000537606 SULT2A1Q06520 285 aa17.38■□□□□ 0.37
SNX17-210ENST00000537606 BCL2L1Q07817 233 aa17.38■□□□□ 0.37
SNX17-210ENST00000537606 PFKFB4Q16877 469 aa17.38■□□□□ 0.37
SNX17-210ENST00000537606 SIDT2Q8NBJ9 832 aaKnown RBP17.38■□□□□ 0.37
SNX17-210ENST00000537606 ACDQ96AP0 544 aa17.38■□□□□ 0.37
SNX17-210ENST00000537606 LINC00597Q9H2U6 94 aa17.38■□□□□ 0.37
SNX17-210ENST00000537606 SARS2Q9NP81 518 aaKnown RBP17.38■□□□□ 0.37
SNX17-210ENST00000537606 NMRK1Q9NWW6 199 aa17.38■□□□□ 0.37
SNX17-210ENST00000537606 TAS2R13Q9NYV9 303 aa17.38■□□□□ 0.37
SNX17-210ENST00000537606 IL17CQ9P0M4 197 aa17.38■□□□□ 0.37
SNX17-210ENST00000537606 STOML1Q9UBI4 398 aa17.38■□□□□ 0.37
SNX17-210ENST00000537606 TSR3Q9UJK0 312 aaKnown RBP17.38■□□□□ 0.37
SNX17-210ENST00000537606 CDYLQ9Y232 598 aa17.38■□□□□ 0.37
SNX17-210ENST00000537606 ZNF510Q9Y2H8 683 aa17.38■□□□□ 0.37
SNX17-210ENST00000537606 PKP3Q9Y446 797 aa17.38■□□□□ 0.37
SNX17-210ENST00000537606 ANKRD12Q6UB98 2062 aa17.38■□□□□ 0.37
SNX17-210ENST00000537606 PPP6CO00743 305 aa17.38■□□□□ 0.37
SNX17-210ENST00000537606 MYOGP15173 224 aa17.38■□□□□ 0.37
SNX17-210ENST00000537606 EPCAMP16422 314 aa17.38■□□□□ 0.37
SNX17-210ENST00000537606 PIK3R1P27986 724 aa17.38■□□□□ 0.37
SNX17-210ENST00000537606 CA5AP35218 305 aa17.38■□□□□ 0.37
SNX17-210ENST00000537606 SUOXP51687 545 aa17.38■□□□□ 0.37
SNX17-210ENST00000537606 ACTR3P61158 418 aa17.38■□□□□ 0.37
SNX17-210ENST00000537606 SLC34A1Q06495 639 aa17.38■□□□□ 0.37
SNX17-210ENST00000537606 ASTLQ6HA08 431 aaPredicted RBP17.38■□□□□ 0.37
SNX17-210ENST00000537606 FAM151BQ6UXP7 276 aa17.38■□□□□ 0.37
SNX17-210ENST00000537606 CUZD1Q86UP6 607 aa17.38■□□□□ 0.37
SNX17-210ENST00000537606 PTGR2Q8N8N7 351 aaPredicted RBP17.38■□□□□ 0.37
SNX17-210ENST00000537606 SPPL3Q8TCT6 385 aa17.38■□□□□ 0.37
SNX17-210ENST00000537606 CCDC126Q96EE4 140 aa17.38■□□□□ 0.37
SNX17-210ENST00000537606 NAF1Q96HR8 494 aaKnown RBP17.38■□□□□ 0.37
SNX17-210ENST00000537606 GSTO2Q9H4Y5 243 aa17.38■□□□□ 0.37
SNX17-210ENST00000537606 STK39Q9UEW8 545 aa17.38■□□□□ 0.37
SNX17-210ENST00000537606 CORO1CQ9ULV4 474 aaPredicted RBP17.38■□□□□ 0.37
SNX17-210ENST00000537606 LRRC42Q9Y546 428 aa17.38■□□□□ 0.37
SNX17-210ENST00000537606 NEDD8-MDP1E9PL57 170 aa17.37■□□□□ 0.37
SNX17-210ENST00000537606 PER2O15055 1255 aa17.37■□□□□ 0.37
SNX17-210ENST00000537606 MOSPD3O75425 235 aa17.37■□□□□ 0.37
SNX17-210ENST00000537606 ARHGEF15O94989 841 aa17.37■□□□□ 0.37
SNX17-210ENST00000537606 CYBBP04839 570 aa17.37■□□□□ 0.37
SNX17-210ENST00000537606 IMPDH1P20839 514 aa17.37■□□□□ 0.37
SNX17-210ENST00000537606 SLC26A3P40879 764 aa17.37■□□□□ 0.37
SNX17-210ENST00000537606 AP1S1P61966 158 aa17.37■□□□□ 0.37
SNX17-210ENST00000537606 XIAPP98170 497 aa17.37■□□□□ 0.37
SNX17-210ENST00000537606 TRMT5Q32P41 509 aaKnown RBP17.37■□□□□ 0.37
SNX17-210ENST00000537606 CTSL3PQ5NE16 218 aa17.37■□□□□ 0.37
SNX17-210ENST00000537606 CLEC6AQ6EIG7 209 aa17.37■□□□□ 0.37
SNX17-210ENST00000537606 ACAD11Q709F0 780 aa17.37■□□□□ 0.37
SNX17-210ENST00000537606 ZSWIM9Q86XI8 627 aa17.37■□□□□ 0.37
SNX17-210ENST00000537606 USP13Q92995 863 aaPredicted RBP17.37■□□□□ 0.37
SNX17-210ENST00000537606 STX18Q9P2W9 335 aaKnown RBP17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms