RNA–Protein interactions for RNA: ENST00000536710.1

PRKDC-208, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 4

Gene PRKDC, Length 554 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-208ENST00000536710 RFX5P48382 616 aaPredicted RBP5.43□□□□□ -1.54
PRKDC-208ENST00000536710 COMPP49747 757 aaPredicted RBP5.43□□□□□ -1.54
PRKDC-208ENST00000536710 SUOXP51687 545 aa5.43□□□□□ -1.54
PRKDC-208ENST00000536710 GPR143P51810 404 aa5.43□□□□□ -1.54
PRKDC-208ENST00000536710 NUDT6P53370 316 aa5.43□□□□□ -1.54
PRKDC-208ENST00000536710 SSBP2P81877 361 aaPredicted RBP5.43□□□□□ -1.54
PRKDC-208ENST00000536710 ECT2LQ008S8 904 aa5.43□□□□□ -1.54
PRKDC-208ENST00000536710 GRIK2Q13002 908 aa5.43□□□□□ -1.54
PRKDC-208ENST00000536710 HNF4GQ14541 408 aa5.43□□□□□ -1.54
PRKDC-208ENST00000536710 PSMD6Q15008 389 aa5.43□□□□□ -1.54
PRKDC-208ENST00000536710 C15orf59Q2T9L4 293 aaPredicted RBP5.43□□□□□ -1.54
PRKDC-208ENST00000536710 SPECC1Q5M775 1068 aa5.43□□□□□ -1.54
PRKDC-208ENST00000536710 ARMC3Q5W041 872 aa5.43□□□□□ -1.54
PRKDC-208ENST00000536710 ADGRA1Q86SQ6 560 aa5.43□□□□□ -1.54
PRKDC-208ENST00000536710 CCDC190Q86UF4 302 aa5.43□□□□□ -1.54
PRKDC-208ENST00000536710 EPHX4Q8IUS5 362 aa5.43□□□□□ -1.54
PRKDC-208ENST00000536710 POGLUT1Q8NBL1 392 aa5.43□□□□□ -1.54
PRKDC-208ENST00000536710 NTN5Q8WTR8 489 aaPredicted RBP5.43□□□□□ -1.54
PRKDC-208ENST00000536710 URB1-AS1Q96HZ7 61 aa5.43□□□□□ -1.54
PRKDC-208ENST00000536710 TXNDC15Q96J42 360 aa5.43□□□□□ -1.54
PRKDC-208ENST00000536710 EGLN2Q96KS0 407 aa5.43□□□□□ -1.54
PRKDC-208ENST00000536710 LRFN5Q96NI6 719 aa5.43□□□□□ -1.54
PRKDC-208ENST00000536710 SH3GL2Q99962 352 aa5.43□□□□□ -1.54
PRKDC-208ENST00000536710 HAUS8Q9BT25 410 aa5.43□□□□□ -1.54
PRKDC-208ENST00000536710 RBM38Q9H0Z9 239 aaKnown RBP5.43□□□□□ -1.54
PRKDC-208ENST00000536710 EPB41L5Q9HCM4 733 aa5.43□□□□□ -1.54
PRKDC-208ENST00000536710 PSD3Q9NYI0 1048 aa5.43□□□□□ -1.54
PRKDC-208ENST00000536710 ZHX1Q9UKY1 873 aaPredicted RBP5.43□□□□□ -1.54
PRKDC-208ENST00000536710 FZD10Q9ULW2 581 aa5.43□□□□□ -1.54
PRKDC-208ENST00000536710 PLAGL1Q9UM63 463 aa5.43□□□□□ -1.54
PRKDC-208ENST00000536710 EXO1Q9UQ84 846 aaKnown RBP5.43□□□□□ -1.54
PRKDC-208ENST00000536710 TRPV2Q9Y5S1 764 aa5.43□□□□□ -1.54
PRKDC-208ENST00000536710 A0A1B0GVT2 93 aa5.42□□□□□ -1.54
PRKDC-208ENST00000536710 KANSL1LA0AUZ9 987 aa5.42□□□□□ -1.54
PRKDC-208ENST00000536710 CPED1A4D0V7 1026 aa5.42□□□□□ -1.54
PRKDC-208ENST00000536710 H3BNX3 289 aa5.42□□□□□ -1.54
PRKDC-208ENST00000536710 SOCS2O14508 198 aa5.42□□□□□ -1.54
PRKDC-208ENST00000536710 TNFRSF13BO14836 293 aaPredicted RBP5.42□□□□□ -1.54
PRKDC-208ENST00000536710 PSG1P11464 419 aa5.42□□□□□ -1.54
PRKDC-208ENST00000536710 TNFRSF1BP20333 461 aa5.42□□□□□ -1.54
PRKDC-208ENST00000536710 RAD23BP54727 409 aa5.42□□□□□ -1.54
PRKDC-208ENST00000536710 CSNK2A1P68400 391 aaPredicted RBP5.42□□□□□ -1.54
PRKDC-208ENST00000536710 SREBF2Q12772 1141 aa5.42□□□□□ -1.54
PRKDC-208ENST00000536710 KRT33BQ14525 404 aa5.42□□□□□ -1.54
PRKDC-208ENST00000536710 RARS2Q5T160 578 aaKnown RBP5.42□□□□□ -1.54
PRKDC-208ENST00000536710 ADALQ6DHV7 355 aa5.42□□□□□ -1.54
PRKDC-208ENST00000536710 DUS1LQ6P1R4 473 aaKnown RBP5.42□□□□□ -1.54
PRKDC-208ENST00000536710 TSPAN33Q86UF1 283 aa5.42□□□□□ -1.54
PRKDC-208ENST00000536710 NRACQ8N912 160 aa5.42□□□□□ -1.54
PRKDC-208ENST00000536710 CSNK2A3Q8NEV1 391 aa5.42□□□□□ -1.54
PRKDC-208ENST00000536710 OR1J2Q8NGS2 313 aa5.42□□□□□ -1.54
PRKDC-208ENST00000536710 HM13Q8TCT9 377 aa5.42□□□□□ -1.54
PRKDC-208ENST00000536710 RND1Q92730 232 aa5.42□□□□□ -1.54
PRKDC-208ENST00000536710 LRRC59Q96AG4 307 aaKnown RBP5.42□□□□□ -1.54
PRKDC-208ENST00000536710 ORAI1Q96D31 301 aa5.42□□□□□ -1.54
PRKDC-208ENST00000536710 CEP295NLQ96MC4 621 aa5.42□□□□□ -1.54
PRKDC-208ENST00000536710 FIZ1Q96SL8 496 aa5.42□□□□□ -1.54
PRKDC-208ENST00000536710 MRPL1Q9BYD6 325 aaKnown RBP5.42□□□□□ -1.54
PRKDC-208ENST00000536710 KCNN2Q9H2S1 579 aa5.42□□□□□ -1.54
PRKDC-208ENST00000536710 RABEP2Q9H5N1 569 aa5.42□□□□□ -1.54
PRKDC-208ENST00000536710 ELOVL5Q9NYP7 299 aa5.42□□□□□ -1.54
PRKDC-208ENST00000536710 WSB2Q9NYS7 404 aaPredicted RBP5.42□□□□□ -1.54
PRKDC-208ENST00000536710 BCCIPQ9P287 314 aaKnown RBP eCLIP5.42□□□□□ -1.54
PRKDC-208ENST00000536710 MARCH4Q9P2E8 410 aaPredicted RBP5.42□□□□□ -1.54
PRKDC-208ENST00000536710 STK39Q9UEW8 545 aa5.42□□□□□ -1.54
PRKDC-208ENST00000536710 GIMAP2Q9UG22 337 aa5.42□□□□□ -1.54
PRKDC-208ENST00000536710 SQORQ9Y6N5 450 aa5.42□□□□□ -1.54
PRKDC-208ENST00000536710 KAT6BQ8WYB5 2073 aa5.41□□□□□ -1.54
PRKDC-208ENST00000536710 LY6G6EA0A0G2JKS1 128 aa5.41□□□□□ -1.54
PRKDC-208ENST00000536710 B4DGG1 531 aa5.41□□□□□ -1.54
PRKDC-208ENST00000536710 PPEF2O14830 753 aa5.41□□□□□ -1.54
PRKDC-208ENST00000536710 WNT9BO14905 357 aa5.41□□□□□ -1.54
PRKDC-208ENST00000536710 RGS14O43566 566 aa5.41□□□□□ -1.54
PRKDC-208ENST00000536710 SPRY3O43610 288 aa5.41□□□□□ -1.54
PRKDC-208ENST00000536710 CSPG5O95196 566 aa5.41□□□□□ -1.54
PRKDC-208ENST00000536710 CH25HO95992 272 aa5.41□□□□□ -1.54
PRKDC-208ENST00000536710 LCATP04180 440 aa5.41□□□□□ -1.54
PRKDC-208ENST00000536710 FGF2P09038 288 aa5.41□□□□□ -1.54
PRKDC-208ENST00000536710 TRIM21P19474 475 aaKnown RBP5.41□□□□□ -1.54
PRKDC-208ENST00000536710 BDKRB2P30411 391 aa5.41□□□□□ -1.54
PRKDC-208ENST00000536710 FOXM1Q08050 763 aa5.41□□□□□ -1.54
PRKDC-208ENST00000536710 EFNB3Q15768 340 aa5.41□□□□□ -1.54
PRKDC-208ENST00000536710 KCTD18Q6PI47 426 aaPredicted RBP5.41□□□□□ -1.54
PRKDC-208ENST00000536710 MINDY1Q8N5J2 469 aa5.41□□□□□ -1.54
PRKDC-208ENST00000536710 ZBTB8BQ8NAP8 495 aaPredicted RBP5.41□□□□□ -1.54
PRKDC-208ENST00000536710 GSDMBQ8TAX9 411 aa5.41□□□□□ -1.54
PRKDC-208ENST00000536710 OIT3Q8WWZ8 545 aa5.41□□□□□ -1.54
PRKDC-208ENST00000536710 APBB2Q92870 758 aa5.41□□□□□ -1.54
PRKDC-208ENST00000536710 PTERQ96BW5 349 aa5.41□□□□□ -1.54
PRKDC-208ENST00000536710 TMCO6Q96DC7 493 aa5.41□□□□□ -1.54
PRKDC-208ENST00000536710 GRAMD2BQ96HH9 432 aa5.41□□□□□ -1.54
PRKDC-208ENST00000536710 ZMAT2Q96NC0 199 aaKnown RBP5.41□□□□□ -1.54
PRKDC-208ENST00000536710 MMTAG2Q9BU76 263 aaKnown RBP5.41□□□□□ -1.54
PRKDC-208ENST00000536710 FAM234AQ9H0X4 552 aa5.41□□□□□ -1.54
PRKDC-208ENST00000536710 SLITRK6Q9H5Y7 841 aa5.41□□□□□ -1.54
PRKDC-208ENST00000536710 SEBOXQ9HB31 216 aaPredicted RBP5.41□□□□□ -1.54
PRKDC-208ENST00000536710 MMP25Q9NPA2 562 aa5.41□□□□□ -1.54
PRKDC-208ENST00000536710 PTGDR2Q9Y5Y4 395 aa5.41□□□□□ -1.54
PRKDC-208ENST00000536710 ZNF644Q9H582 1327 aaPredicted RBP5.41□□□□□ -1.54
PRKDC-208ENST00000536710 IGHV4-28A0A0C4DH34 117 aa5.4□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms