RNA–Protein interactions for RNA: ENST00000535906.1

VPS33B-202, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 2 BASIC

Gene VPS33B, Length 2,420 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-202ENST00000535906 FNDC3AQ9Y2H6 1198 aaKnown RBP13.33□□□□□ -0.28
VPS33B-202ENST00000535906 GBF1Q92538 1859 aa13.33□□□□□ -0.28
VPS33B-202ENST00000535906 RNASEH1O60930 286 aaKnown RBP13.32□□□□□ -0.28
VPS33B-202ENST00000535906 NDUFS3O75489 264 aa13.32□□□□□ -0.28
VPS33B-202ENST00000535906 SRP72O76094 671 aaKnown RBP13.32□□□□□ -0.28
VPS33B-202ENST00000535906 RHOBTB1O94844 696 aa13.32□□□□□ -0.28
VPS33B-202ENST00000535906 MT-CO1P00395 513 aa13.32□□□□□ -0.28
VPS33B-202ENST00000535906 ZCCHC18P0CG32 403 aa13.32□□□□□ -0.28
VPS33B-202ENST00000535906 EPHB3P54753 998 aa13.32□□□□□ -0.28
VPS33B-202ENST00000535906 AQP4P55087 323 aa13.32□□□□□ -0.28
VPS33B-202ENST00000535906 NCEH1Q6PIU2 408 aa13.32□□□□□ -0.28
VPS33B-202ENST00000535906 CHSY3Q70JA7 882 aa13.32□□□□□ -0.28
VPS33B-202ENST00000535906 PTGR2Q8N8N7 351 aaPredicted RBP13.32□□□□□ -0.28
VPS33B-202ENST00000535906 FAR2Q96K12 515 aa13.32□□□□□ -0.28
VPS33B-202ENST00000535906 BIRC8Q96P09 236 aa13.32□□□□□ -0.28
VPS33B-202ENST00000535906 TSC22D3Q99576 134 aa13.32□□□□□ -0.28
VPS33B-202ENST00000535906 TRMOQ9BU70 441 aa13.32□□□□□ -0.28
VPS33B-202ENST00000535906 ADGRE3Q9BY15 652 aa13.32□□□□□ -0.28
VPS33B-202ENST00000535906 EFCAB1Q9HAE3 211 aa13.32□□□□□ -0.28
VPS33B-202ENST00000535906 IL21Q9HBE4 155 aa13.32□□□□□ -0.28
VPS33B-202ENST00000535906 TMEM39AQ9NV64 488 aa13.32□□□□□ -0.28
VPS33B-202ENST00000535906 C6orf203Q9P0P8 240 aaPredicted RBP13.32□□□□□ -0.28
VPS33B-202ENST00000535906 IKZF3Q9UKT9 509 aa13.32□□□□□ -0.28
VPS33B-202ENST00000535906 FCF1Q9Y324 198 aaKnown RBP13.32□□□□□ -0.28
VPS33B-202ENST00000535906 OR51B4Q9Y5P0 310 aa13.32□□□□□ -0.28
VPS33B-202ENST00000535906 OR1I1O60431 355 aa13.32□□□□□ -0.28
VPS33B-202ENST00000535906 HDCP19113 662 aa13.32□□□□□ -0.28
VPS33B-202ENST00000535906 THOP1P52888 689 aa13.32□□□□□ -0.28
VPS33B-202ENST00000535906 RPL26P61254 145 aaKnown RBP13.32□□□□□ -0.28
VPS33B-202ENST00000535906 SH3BP2P78314 561 aa13.32□□□□□ -0.28
VPS33B-202ENST00000535906 MED21Q13503 144 aa13.32□□□□□ -0.28
VPS33B-202ENST00000535906 PFKFB4Q16877 469 aa13.32□□□□□ -0.28
VPS33B-202ENST00000535906 ATXN7L2Q5T6C5 722 aaPredicted RBP13.32□□□□□ -0.28
VPS33B-202ENST00000535906 OGFRL1Q5TC84 451 aaPredicted RBP13.32□□□□□ -0.28
VPS33B-202ENST00000535906 FOXB2Q5VYV0 432 aa13.32□□□□□ -0.28
VPS33B-202ENST00000535906 ZNF783Q6ZMS7 281 aa13.32□□□□□ -0.28
VPS33B-202ENST00000535906 DDX53Q86TM3 631 aaKnown RBP13.32□□□□□ -0.28
VPS33B-202ENST00000535906 PQLC1Q8N2U9 271 aa13.32□□□□□ -0.28
VPS33B-202ENST00000535906 RHEBL1Q8TAI7 183 aa13.32□□□□□ -0.28
VPS33B-202ENST00000535906 HMGCLL1Q8TB92 370 aa13.32□□□□□ -0.28
VPS33B-202ENST00000535906 TMA16Q96EY4 203 aaKnown RBP13.32□□□□□ -0.28
VPS33B-202ENST00000535906 TCF12Q99081 682 aa13.32□□□□□ -0.28
VPS33B-202ENST00000535906 FAM192AQ9GZU8 254 aa13.32□□□□□ -0.28
VPS33B-202ENST00000535906 SAGE1Q9NXZ1 904 aa13.32□□□□□ -0.28
VPS33B-202ENST00000535906 TAS2R13Q9NYV9 303 aa13.32□□□□□ -0.28
VPS33B-202ENST00000535906 SPG21Q9NZD8 308 aa13.32□□□□□ -0.28
VPS33B-202ENST00000535906 BCAP29Q9UHQ4 241 aa13.32□□□□□ -0.28
VPS33B-202ENST00000535906 VPS51Q9UID3 782 aa13.32□□□□□ -0.28
VPS33B-202ENST00000535906 CPQQ9Y646 472 aa13.32□□□□□ -0.28
VPS33B-202ENST00000535906 K7ERQ8 282 aa13.31□□□□□ -0.28
VPS33B-202ENST00000535906 GFRA2O00451 464 aa13.31□□□□□ -0.28
VPS33B-202ENST00000535906 TEX28O15482 410 aa13.31□□□□□ -0.28
VPS33B-202ENST00000535906 PRAMEF12O95522 483 aa13.31□□□□□ -0.28
VPS33B-202ENST00000535906 FESP07332 822 aa13.31□□□□□ -0.28
VPS33B-202ENST00000535906 PIM1P11309 404 aaPredicted RBP13.31□□□□□ -0.28
VPS33B-202ENST00000535906 MC4RP32245 332 aa13.31□□□□□ -0.28
VPS33B-202ENST00000535906 CSKP41240 450 aa13.31□□□□□ -0.28
VPS33B-202ENST00000535906 INHBCP55103 352 aa13.31□□□□□ -0.28
VPS33B-202ENST00000535906 PTPRNQ16849 979 aa13.31□□□□□ -0.28
VPS33B-202ENST00000535906 INO80DQ53TQ3 878 aaPredicted RBP13.31□□□□□ -0.28
VPS33B-202ENST00000535906 Q6ZNB5 142 aa13.31□□□□□ -0.28
VPS33B-202ENST00000535906 AFAP1L2Q8N4X5 818 aa13.31□□□□□ -0.28
VPS33B-202ENST00000535906 ALG14Q96F25 216 aa13.31□□□□□ -0.28
VPS33B-202ENST00000535906 NSUN5Q96P11 429 aaKnown RBP13.31□□□□□ -0.28
VPS33B-202ENST00000535906 GPR21Q99679 349 aa13.31□□□□□ -0.28
VPS33B-202ENST00000535906 SLC30A3Q99726 388 aa13.31□□□□□ -0.28
VPS33B-202ENST00000535906 CCDC68Q9H2F9 335 aa13.31□□□□□ -0.28
VPS33B-202ENST00000535906 TFB2MQ9H5Q4 396 aaKnown RBP13.31□□□□□ -0.28
VPS33B-202ENST00000535906 WDR41Q9HAD4 459 aa13.31□□□□□ -0.28
VPS33B-202ENST00000535906 OBSL1O75147 1896 aa13.31□□□□□ -0.28
VPS33B-202ENST00000535906 ATP6AP2A0A1C7CYW4 349 aa13.31□□□□□ -0.28
VPS33B-202ENST00000535906 GPR39O43194 453 aa13.31□□□□□ -0.28
VPS33B-202ENST00000535906 AHCYL1O43865 530 aa13.31□□□□□ -0.28
VPS33B-202ENST00000535906 ATP6AP2O75787 350 aa13.31□□□□□ -0.28
VPS33B-202ENST00000535906 HSPA1AP0DMV8 641 aaKnown RBP13.31□□□□□ -0.28
VPS33B-202ENST00000535906 HSPA1BP0DMV9 641 aaKnown RBP13.31□□□□□ -0.28
VPS33B-202ENST00000535906 BMP1P13497 986 aa13.31□□□□□ -0.28
VPS33B-202ENST00000535906 VCLP18206 1134 aa13.31□□□□□ -0.28
VPS33B-202ENST00000535906 XRCC1P18887 633 aaPredicted RBP13.31□□□□□ -0.28
VPS33B-202ENST00000535906 ITGB8P26012 769 aa13.31□□□□□ -0.28
VPS33B-202ENST00000535906 DPP6P42658 865 aa13.31□□□□□ -0.28
VPS33B-202ENST00000535906 RHOAP61586 193 aa13.31□□□□□ -0.28
VPS33B-202ENST00000535906 IRX1P78414 480 aaPredicted RBP13.31□□□□□ -0.28
VPS33B-202ENST00000535906 ART3Q13508 389 aa13.31□□□□□ -0.28
VPS33B-202ENST00000535906 FLOT2Q14254 428 aa13.31□□□□□ -0.28
VPS33B-202ENST00000535906 UGT3A2Q3SY77 523 aa13.31□□□□□ -0.28
VPS33B-202ENST00000535906 ZFP1Q6P2D0 407 aa13.31□□□□□ -0.28
VPS33B-202ENST00000535906 GK5Q6ZS86 529 aa13.31□□□□□ -0.28
VPS33B-202ENST00000535906 TTC30BQ8N4P2 665 aa13.31□□□□□ -0.28
VPS33B-202ENST00000535906 KIAA1191Q96A73 305 aa13.31□□□□□ -0.28
VPS33B-202ENST00000535906 C3orf30Q96M34 536 aa13.31□□□□□ -0.28
VPS33B-202ENST00000535906 BTBD9Q96Q07 612 aa13.31□□□□□ -0.28
VPS33B-202ENST00000535906 NPAS2Q99743 824 aa13.31□□□□□ -0.28
VPS33B-202ENST00000535906 DERL2Q9GZP9 239 aa13.31□□□□□ -0.28
VPS33B-202ENST00000535906 SYTL2Q9HCH5 934 aa13.31□□□□□ -0.28
VPS33B-202ENST00000535906 MRGBPQ9NV56 204 aa13.31□□□□□ -0.28
VPS33B-202ENST00000535906 PCDHB9Q9Y5E1 797 aa13.31□□□□□ -0.28
VPS33B-202ENST00000535906 LCHNA4D1U4 455 aa13.3□□□□□ -0.28
VPS33B-202ENST00000535906 ENO4A6NNW6 628 aa13.3□□□□□ -0.28
VPS33B-202ENST00000535906 UBDO15205 165 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms