RNA–Protein interactions for RNA: ENST00000535565.6

RBFOX1-206, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 2 BASIC

Gene RBFOX1, Length 1,599 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-206ENST00000535565 SERAC1Q96JX3 654 aa22.82■■□□□ 1.24
RBFOX1-206ENST00000535565 WRAP53Q9BUR4 548 aaKnown RBP22.82■■□□□ 1.24
RBFOX1-206ENST00000535565 FAM96AQ9H5X1 160 aa22.82■■□□□ 1.24
RBFOX1-206ENST00000535565 CNOT10Q9H9A5 744 aaKnown RBP22.82■■□□□ 1.24
RBFOX1-206ENST00000535565 SSU72Q9NP77 194 aaKnown RBP22.82■■□□□ 1.24
RBFOX1-206ENST00000535565 MTO1Q9Y2Z2 717 aaKnown RBP22.82■■□□□ 1.24
RBFOX1-206ENST00000535565 FAM95CA0A1B0GW59 222 aa22.81■■□□□ 1.24
RBFOX1-206ENST00000535565 GOLGA8RI6L899 631 aa22.81■■□□□ 1.24
RBFOX1-206ENST00000535565 GAPDHSO14556 408 aaPredicted RBP22.81■■□□□ 1.24
RBFOX1-206ENST00000535565 TPP1O14773 563 aa22.81■■□□□ 1.24
RBFOX1-206ENST00000535565 AP1G1O43747 822 aa22.81■■□□□ 1.24
RBFOX1-206ENST00000535565 RFPL1O75677 317 aa22.81■■□□□ 1.24
RBFOX1-206ENST00000535565 PRSS56P0CW18 603 aa22.81■■□□□ 1.24
RBFOX1-206ENST00000535565 PYGBP11216 843 aa22.81■■□□□ 1.24
RBFOX1-206ENST00000535565 CHRNB1P11230 501 aa22.81■■□□□ 1.24
RBFOX1-206ENST00000535565 STARD6P59095 220 aa22.81■■□□□ 1.24
RBFOX1-206ENST00000535565 ZBTB16Q05516 673 aa22.81■■□□□ 1.24
RBFOX1-206ENST00000535565 ITGA9Q13797 1035 aa22.81■■□□□ 1.24
RBFOX1-206ENST00000535565 TTC31Q49AM3 519 aaPredicted RBP22.81■■□□□ 1.24
RBFOX1-206ENST00000535565 LYPLAL1Q5VWZ2 237 aa22.81■■□□□ 1.24
RBFOX1-206ENST00000535565 KDM7AQ6ZMT4 941 aa22.81■■□□□ 1.24
RBFOX1-206ENST00000535565 PIANPQ8IYJ0 282 aa22.81■■□□□ 1.24
RBFOX1-206ENST00000535565 GPATCH11Q8N954 259 aa22.81■■□□□ 1.24
RBFOX1-206ENST00000535565 ZNF398Q8TD17 642 aa22.81■■□□□ 1.24
RBFOX1-206ENST00000535565 ACMSDQ8TDX5 336 aa22.81■■□□□ 1.24
RBFOX1-206ENST00000535565 CXorf40AQ8TE69 158 aa22.81■■□□□ 1.24
RBFOX1-206ENST00000535565 GANCQ8TET4 914 aa22.81■■□□□ 1.24
RBFOX1-206ENST00000535565 FAM83DQ9H4H8 585 aa22.81■■□□□ 1.24
RBFOX1-206ENST00000535565 KCNK9Q9NPC2 374 aa22.81■■□□□ 1.24
RBFOX1-206ENST00000535565 NFKBIL1Q9UBC1 381 aaPredicted RBP22.81■■□□□ 1.24
RBFOX1-206ENST00000535565 CRLS1Q9UJA2 301 aa22.81■■□□□ 1.24
RBFOX1-206ENST00000535565 SMG5Q9UPR3 1016 aaKnown RBP22.81■■□□□ 1.24
RBFOX1-206ENST00000535565 FADS3Q9Y5Q0 445 aa22.81■■□□□ 1.24
RBFOX1-206ENST00000535565 A0A1W2PP55 124 aa22.8■■□□□ 1.24
RBFOX1-206ENST00000535565 RNASEH2AO75792 299 aaKnown RBP22.8■■□□□ 1.24
RBFOX1-206ENST00000535565 ALDOAP04075 364 aaKnown RBP22.8■■□□□ 1.24
RBFOX1-206ENST00000535565 CREB1P16220 341 aa22.8■■□□□ 1.24
RBFOX1-206ENST00000535565 TYK2P29597 1187 aa22.8■■□□□ 1.24
RBFOX1-206ENST00000535565 CDKN1CP49918 316 aaPredicted RBP22.8■■□□□ 1.24
RBFOX1-206ENST00000535565 SFSWAPQ12872 951 aaKnown RBP22.8■■□□□ 1.24
RBFOX1-206ENST00000535565 CHRNA6Q15825 494 aa22.8■■□□□ 1.24
RBFOX1-206ENST00000535565 ZNF789Q5FWF6 425 aa22.8■■□□□ 1.24
RBFOX1-206ENST00000535565 AGBL4Q5VU57 503 aa22.8■■□□□ 1.24
RBFOX1-206ENST00000535565 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP22.8■■□□□ 1.24
RBFOX1-206ENST00000535565 NRSN1Q8IZ57 195 aa22.8■■□□□ 1.24
RBFOX1-206ENST00000535565 ATXN2LQ8WWM7 1075 aaKnown RBP22.8■■□□□ 1.24
RBFOX1-206ENST00000535565 ISL2Q96A47 359 aa22.8■■□□□ 1.24
RBFOX1-206ENST00000535565 SIPA1Q96FS4 1042 aa22.8■■□□□ 1.24
RBFOX1-206ENST00000535565 ELMO2Q96JJ3 720 aa22.8■■□□□ 1.24
RBFOX1-206ENST00000535565 NELL2Q99435 816 aa22.8■■□□□ 1.24
RBFOX1-206ENST00000535565 KLF6Q99612 283 aaPredicted RBP22.8■■□□□ 1.24
RBFOX1-206ENST00000535565 CD248Q9HCU0 757 aa22.8■■□□□ 1.24
RBFOX1-206ENST00000535565 SNX15Q9NRS6 342 aa22.8■■□□□ 1.24
RBFOX1-206ENST00000535565 FBXL12Q9NXK8 326 aa22.8■■□□□ 1.24
RBFOX1-206ENST00000535565 CD84Q9UIB8 345 aa22.8■■□□□ 1.24
RBFOX1-206ENST00000535565 SLC39A10Q9ULF5 831 aa22.8■■□□□ 1.24
RBFOX1-206ENST00000535565 PLXNB3Q9ULL4 1909 aa22.8■■□□□ 1.24
RBFOX1-206ENST00000535565 KANSL1LA0AUZ9 987 aa22.8■■□□□ 1.24
RBFOX1-206ENST00000535565 UBA6A0AVT1 1052 aaPredicted RBP22.8■■□□□ 1.24
RBFOX1-206ENST00000535565 KRBA1A5PL33 1030 aa22.8■■□□□ 1.24
RBFOX1-206ENST00000535565 GOLGA8CPA6NN73 597 aa22.8■■□□□ 1.24
RBFOX1-206ENST00000535565 WNT9AO14904 365 aa22.8■■□□□ 1.24
RBFOX1-206ENST00000535565 TSPAN6O43657 245 aa22.8■■□□□ 1.24
RBFOX1-206ENST00000535565 TARSP26639 723 aaKnown RBP22.8■■□□□ 1.24
RBFOX1-206ENST00000535565 ETV3P41162 512 aa22.8■■□□□ 1.24
RBFOX1-206ENST00000535565 SLC12A2P55011 1212 aa22.8■■□□□ 1.24
RBFOX1-206ENST00000535565 POU4F1Q01851 419 aa22.8■■□□□ 1.24
RBFOX1-206ENST00000535565 USP10Q14694 798 aaKnown RBP22.8■■□□□ 1.24
RBFOX1-206ENST00000535565 UBXN2BQ14CS0 331 aa22.8■■□□□ 1.24
RBFOX1-206ENST00000535565 Q6ZVL8 140 aa22.8■■□□□ 1.24
RBFOX1-206ENST00000535565 DTX3LQ8TDB6 740 aa22.8■■□□□ 1.24
RBFOX1-206ENST00000535565 ULK4Q96C45 1275 aa22.8■■□□□ 1.24
RBFOX1-206ENST00000535565 CABS1Q96KC9 395 aa22.8■■□□□ 1.24
RBFOX1-206ENST00000535565 SPATA16Q9BXB7 569 aa22.8■■□□□ 1.24
RBFOX1-206ENST00000535565 CCDC68Q9H2F9 335 aa22.8■■□□□ 1.24
RBFOX1-206ENST00000535565 LMAN1LQ9HAT1 526 aa22.8■■□□□ 1.24
RBFOX1-206ENST00000535565 LTB4R2Q9NPC1 389 aa22.8■■□□□ 1.24
RBFOX1-206ENST00000535565 CRYL1Q9Y2S2 319 aa22.8■■□□□ 1.24
RBFOX1-206ENST00000535565 TMEM120BA0PK00 339 aa22.79■■□□□ 1.24
RBFOX1-206ENST00000535565 PRPF4O43172 522 aaKnown RBP eCLIP22.79■■□□□ 1.24
RBFOX1-206ENST00000535565 ACADMP11310 421 aa22.79■■□□□ 1.24
RBFOX1-206ENST00000535565 PTGER3P43115 390 aa22.79■■□□□ 1.24
RBFOX1-206ENST00000535565 ATP1A2P50993 1020 aa22.79■■□□□ 1.24
RBFOX1-206ENST00000535565 SLC18A2Q05940 514 aa22.79■■□□□ 1.24
RBFOX1-206ENST00000535565 CRY1Q16526 586 aa22.79■■□□□ 1.24
RBFOX1-206ENST00000535565 ZNF284Q2VY69 593 aa22.79■■□□□ 1.24
RBFOX1-206ENST00000535565 TMEM92Q6UXU6 159 aa22.79■■□□□ 1.24
RBFOX1-206ENST00000535565 RFLNAQ6ZTI6 216 aa22.79■■□□□ 1.24
RBFOX1-206ENST00000535565 CYP2U1Q7Z449 544 aa22.79■■□□□ 1.24
RBFOX1-206ENST00000535565 TECPR1Q7Z6L1 1165 aa22.79■■□□□ 1.24
RBFOX1-206ENST00000535565 SERPINA9Q86WD7 417 aa22.79■■□□□ 1.24
RBFOX1-206ENST00000535565 SIX5Q8N196 739 aa22.79■■□□□ 1.24
RBFOX1-206ENST00000535565 COQ10AQ96MF6 247 aa22.79■■□□□ 1.24
RBFOX1-206ENST00000535565 POLMQ9NP87 494 aaPredicted RBP22.79■■□□□ 1.24
RBFOX1-206ENST00000535565 PCMTD2Q9NV79 361 aa22.79■■□□□ 1.24
RBFOX1-206ENST00000535565 TRBV5-4A0A0C4DH59 114 aa22.78■■□□□ 1.24
RBFOX1-206ENST00000535565 TCRBV21S2A2A0A5A6 115 aa22.78■■□□□ 1.24
RBFOX1-206ENST00000535565 GPR39O43194 453 aa22.78■■□□□ 1.24
RBFOX1-206ENST00000535565 LZTS3O60299 673 aaPredicted RBP22.78■■□□□ 1.24
RBFOX1-206ENST00000535565 SPAG7O75391 227 aa22.78■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms