RNA–Protein interactions for RNA: ENST00000535452.5

CLSTN3-205, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-205ENST00000535452 MLPHQ9BV36 600 aaPredicted RBP13.17□□□□□ -0.3
CLSTN3-205ENST00000535452 ABCG8Q9H221 673 aa13.17□□□□□ -0.3
CLSTN3-205ENST00000535452 EPB41L1Q9H4G0 881 aa13.17□□□□□ -0.3
CLSTN3-205ENST00000535452 FAM83DQ9H4H8 585 aa13.17□□□□□ -0.3
CLSTN3-205ENST00000535452 ETNK2Q9NVF9 386 aa13.17□□□□□ -0.3
CLSTN3-205ENST00000535452 VPS18Q9P253 973 aa13.17□□□□□ -0.3
CLSTN3-205ENST00000535452 CAPN11Q9UMQ6 739 aa13.17□□□□□ -0.3
CLSTN3-205ENST00000535452 CHKBQ9Y259 395 aa13.17□□□□□ -0.3
CLSTN3-205ENST00000535452 TMEM98Q9Y2Y6 226 aa13.17□□□□□ -0.3
CLSTN3-205ENST00000535452 PPIL1Q9Y3C6 166 aa13.17□□□□□ -0.3
CLSTN3-205ENST00000535452 PTPRQQ9UMZ3 2332 aa13.16□□□□□ -0.3
CLSTN3-205ENST00000535452 SYCE3A1L190 88 aa13.16□□□□□ -0.3
CLSTN3-205ENST00000535452 PMS2P1A4D2B8 440 aa13.16□□□□□ -0.3
CLSTN3-205ENST00000535452 MFSD11O43934 449 aa13.16□□□□□ -0.3
CLSTN3-205ENST00000535452 SNX2O60749 519 aa13.16□□□□□ -0.3
CLSTN3-205ENST00000535452 VCLP18206 1134 aa13.16□□□□□ -0.3
CLSTN3-205ENST00000535452 SLC25A11Q02978 314 aaKnown RBP13.16□□□□□ -0.3
CLSTN3-205ENST00000535452 TRIM14Q14142 442 aa13.16□□□□□ -0.3
CLSTN3-205ENST00000535452 PAFAH1B3Q15102 231 aaKnown RBP13.16□□□□□ -0.3
CLSTN3-205ENST00000535452 TGIF1Q15583 401 aa13.16□□□□□ -0.3
CLSTN3-205ENST00000535452 TMEM71Q6P5X7 295 aa13.16□□□□□ -0.3
CLSTN3-205ENST00000535452 CYP4V2Q6ZWL3 525 aaPredicted RBP13.16□□□□□ -0.3
CLSTN3-205ENST00000535452 BZW1Q7L1Q6 419 aaKnown RBP13.16□□□□□ -0.3
CLSTN3-205ENST00000535452 ZNF438Q7Z4V0 828 aa13.16□□□□□ -0.3
CLSTN3-205ENST00000535452 TSPAN33Q86UF1 283 aa13.16□□□□□ -0.3
CLSTN3-205ENST00000535452 TP53INP2Q8IXH6 220 aa13.16□□□□□ -0.3
CLSTN3-205ENST00000535452 RCBTB1Q8NDN9 531 aa13.16□□□□□ -0.3
CLSTN3-205ENST00000535452 PIH1D2Q8WWB5 315 aa13.16□□□□□ -0.3
CLSTN3-205ENST00000535452 FATE1Q969F0 183 aa13.16□□□□□ -0.3
CLSTN3-205ENST00000535452 CATSPER2Q96P56 530 aa13.16□□□□□ -0.3
CLSTN3-205ENST00000535452 ZPBPQ9BS86 351 aa13.16□□□□□ -0.3
CLSTN3-205ENST00000535452 RIOK2Q9BVS4 552 aaKnown RBP13.16□□□□□ -0.3
CLSTN3-205ENST00000535452 DDA1Q9BW61 102 aa13.16□□□□□ -0.3
CLSTN3-205ENST00000535452 TDRD1Q9BXT4 1180 aaKnown RBP13.16□□□□□ -0.3
CLSTN3-205ENST00000535452 LAMA5O15230 3695 aa13.16□□□□□ -0.3
CLSTN3-205ENST00000535452 A0A087X0T9 212 aa13.15□□□□□ -0.3
CLSTN3-205ENST00000535452 IGHV5-10-1A0A0J9YXX1 117 aa13.15□□□□□ -0.3
CLSTN3-205ENST00000535452 LRRD1A4D1F6 860 aa13.15□□□□□ -0.3
CLSTN3-205ENST00000535452 EFCAB7A8K855 629 aa13.15□□□□□ -0.3
CLSTN3-205ENST00000535452 B4GAT1O43505 415 aa13.15□□□□□ -0.3
CLSTN3-205ENST00000535452 PROSCO94903 275 aa13.15□□□□□ -0.3
CLSTN3-205ENST00000535452 PEX11BO96011 259 aa13.15□□□□□ -0.3
CLSTN3-205ENST00000535452 FAM228BP0C875 321 aa13.15□□□□□ -0.3
CLSTN3-205ENST00000535452 FASLGP48023 281 aa13.15□□□□□ -0.3
CLSTN3-205ENST00000535452 STC1P52823 247 aa13.15□□□□□ -0.3
CLSTN3-205ENST00000535452 MC1RQ01726 317 aa13.15□□□□□ -0.3
CLSTN3-205ENST00000535452 DSC2Q02487 901 aa13.15□□□□□ -0.3
CLSTN3-205ENST00000535452 AP1B1Q10567 949 aa13.15□□□□□ -0.3
CLSTN3-205ENST00000535452 MMRN1Q13201 1228 aa13.15□□□□□ -0.3
CLSTN3-205ENST00000535452 GTF2H3Q13889 308 aa13.15□□□□□ -0.3
CLSTN3-205ENST00000535452 DPYSL3Q14195 570 aa13.15□□□□□ -0.3
CLSTN3-205ENST00000535452 NR1D2Q14995 579 aa13.15□□□□□ -0.3
CLSTN3-205ENST00000535452 C16orf72Q14CZ0 275 aa13.15□□□□□ -0.3
CLSTN3-205ENST00000535452 PDK1Q15118 436 aa13.15□□□□□ -0.3
CLSTN3-205ENST00000535452 PYCR3Q53H96 274 aa13.15□□□□□ -0.3
CLSTN3-205ENST00000535452 ZNF569Q5MCW4 686 aa13.15□□□□□ -0.3
CLSTN3-205ENST00000535452 SNAP47Q5SQN1 464 aa13.15□□□□□ -0.3
CLSTN3-205ENST00000535452 E4F1Q66K89 784 aaPredicted RBP13.15□□□□□ -0.3
CLSTN3-205ENST00000535452 NCBP2-AS2Q69YL0 99 aa13.15□□□□□ -0.3
CLSTN3-205ENST00000535452 CEACAM20Q6UY09 585 aa13.15□□□□□ -0.3
CLSTN3-205ENST00000535452 ATG14Q6ZNE5 492 aa13.15□□□□□ -0.3
CLSTN3-205ENST00000535452 LYSMD3Q7Z3D4 306 aa13.15□□□□□ -0.3
CLSTN3-205ENST00000535452 TECPR1Q7Z6L1 1165 aa13.15□□□□□ -0.3
CLSTN3-205ENST00000535452 VASH2Q86V25 355 aa13.15□□□□□ -0.3
CLSTN3-205ENST00000535452 PLXDC1Q8IUK5 500 aa13.15□□□□□ -0.3
CLSTN3-205ENST00000535452 NAGSQ8N159 534 aa13.15□□□□□ -0.3
CLSTN3-205ENST00000535452 NCSTNQ92542 709 aa13.15□□□□□ -0.3
CLSTN3-205ENST00000535452 EXTL1Q92935 676 aa13.15□□□□□ -0.3
CLSTN3-205ENST00000535452 ART4Q93070 314 aa13.15□□□□□ -0.3
CLSTN3-205ENST00000535452 SCAMP4Q969E2 229 aa13.15□□□□□ -0.3
CLSTN3-205ENST00000535452 HDAC11Q96DB2 347 aa13.15□□□□□ -0.3
CLSTN3-205ENST00000535452 TTC25Q96NG3 672 aa13.15□□□□□ -0.3
CLSTN3-205ENST00000535452 TSGA13Q96PP4 275 aa13.15□□□□□ -0.3
CLSTN3-205ENST00000535452 FERMT1Q9BQL6 677 aa13.15□□□□□ -0.3
CLSTN3-205ENST00000535452 NUDT22Q9BRQ3 303 aa13.15□□□□□ -0.3
CLSTN3-205ENST00000535452 SPATA16Q9BXB7 569 aa13.15□□□□□ -0.3
CLSTN3-205ENST00000535452 TRIT1Q9H3H1 467 aaKnown RBP13.15□□□□□ -0.3
CLSTN3-205ENST00000535452 OSGEPL1Q9H4B0 414 aa13.15□□□□□ -0.3
CLSTN3-205ENST00000535452 CLMPQ9H6B4 373 aa13.15□□□□□ -0.3
CLSTN3-205ENST00000535452 SSUH2Q9Y2M2 353 aa13.15□□□□□ -0.3
CLSTN3-205ENST00000535452 PCDHGA4Q9Y5G9 962 aa13.15□□□□□ -0.3
CLSTN3-205ENST00000535452 PCDHGA3Q9Y5H0 932 aa13.15□□□□□ -0.3
CLSTN3-205ENST00000535452 HEY1Q9Y5J3 304 aa13.15□□□□□ -0.3
CLSTN3-205ENST00000535452 ANKRD36A6QL64 1941 aa13.15□□□□□ -0.3
CLSTN3-205ENST00000535452 RP1P56715 2156 aa13.14□□□□□ -0.31
CLSTN3-205ENST00000535452 TRBV23OR9-2A0A075B6M9 112 aa13.14□□□□□ -0.31
CLSTN3-205ENST00000535452 IGHV1OR21-1A0A087WYE8 117 aa13.14□□□□□ -0.31
CLSTN3-205ENST00000535452 KIR2DS5A0A0G2JLQ3 304 aa13.14□□□□□ -0.31
CLSTN3-205ENST00000535452 A0A0G2JNG1 304 aa13.14□□□□□ -0.31
CLSTN3-205ENST00000535452 ZNF891A8MT65 544 aaPredicted RBP13.14□□□□□ -0.31
CLSTN3-205ENST00000535452 B4E171 279 aa13.14□□□□□ -0.31
CLSTN3-205ENST00000535452 GPR89AB7ZAQ6 455 aa13.14□□□□□ -0.31
CLSTN3-205ENST00000535452 C9orf172C9J069 976 aa13.14□□□□□ -0.31
CLSTN3-205ENST00000535452 IQCJ-SCHIP1C9J366 451 aaPredicted RBP13.14□□□□□ -0.31
CLSTN3-205ENST00000535452 KIR2DS3K7RE56 304 aa13.14□□□□□ -0.31
CLSTN3-205ENST00000535452 APOL1O14791 398 aa13.14□□□□□ -0.31
CLSTN3-205ENST00000535452 SLC25A14O95258 325 aaPredicted RBP13.14□□□□□ -0.31
CLSTN3-205ENST00000535452 MAP3K6O95382 1288 aa13.14□□□□□ -0.31
CLSTN3-205ENST00000535452 CLDN7O95471 211 aa13.14□□□□□ -0.31
CLSTN3-205ENST00000535452 SLC4A1P02730 911 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms