RNA–Protein interactions for RNA: ENST00000535297.1

TMEM258-203, Transcript of transmembrane protein 258, humanhuman

TSL 2

Gene TMEM258, Length 395 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM258-203ENST00000535297 CDCP2Q5VXM1 449 aa13.73□□□□□ -0.21
TMEM258-203ENST00000535297 ITPRIPL1Q6GPH6 555 aa13.73□□□□□ -0.21
TMEM258-203ENST00000535297 AADACL2Q6P093 401 aa13.73□□□□□ -0.21
TMEM258-203ENST00000535297 TMC3Q7Z5M5 1100 aa13.73□□□□□ -0.21
TMEM258-203ENST00000535297 TTC13Q8NBP0 860 aa13.73□□□□□ -0.21
TMEM258-203ENST00000535297 OR6C4Q8NGE1 309 aa13.73□□□□□ -0.21
TMEM258-203ENST00000535297 GPBAR1Q8TDU6 330 aa13.73□□□□□ -0.21
TMEM258-203ENST00000535297 NXPE2Q96DL1 559 aa13.73□□□□□ -0.21
TMEM258-203ENST00000535297 SCARF2Q96GP6 870 aaPredicted RBP13.73□□□□□ -0.21
TMEM258-203ENST00000535297 OXNAD1Q96HP4 312 aaPredicted RBP13.73□□□□□ -0.21
TMEM258-203ENST00000535297 HES6Q96HZ4 224 aa13.73□□□□□ -0.21
TMEM258-203ENST00000535297 WDR24Q96S15 920 aa13.73□□□□□ -0.21
TMEM258-203ENST00000535297 AGAP2Q99490 1192 aa13.73□□□□□ -0.21
TMEM258-203ENST00000535297 GSDMCQ9BYG8 508 aa13.73□□□□□ -0.21
TMEM258-203ENST00000535297 GBA3Q9H227 469 aa13.73□□□□□ -0.21
TMEM258-203ENST00000535297 CCDC86Q9H6F5 360 aaKnown RBP13.73□□□□□ -0.21
TMEM258-203ENST00000535297 UBP1Q9NZI7 540 aa13.73□□□□□ -0.21
TMEM258-203ENST00000535297 SIRPGQ9P1W8 387 aa13.73□□□□□ -0.21
TMEM258-203ENST00000535297 ZMIZ1Q9ULJ6 1067 aa13.73□□□□□ -0.21
TMEM258-203ENST00000535297 PADI4Q9UM07 663 aa13.73□□□□□ -0.21
TMEM258-203ENST00000535297 PACSIN2Q9UNF0 486 aaPredicted RBP13.73□□□□□ -0.21
TMEM258-203ENST00000535297 ACACAQ13085 2346 aa13.73□□□□□ -0.21
TMEM258-203ENST00000535297 COL27A1Q8IZC6 1860 aaPredicted RBP13.72□□□□□ -0.21
TMEM258-203ENST00000535297 ARHGEF17Q96PE2 2063 aaPredicted RBP13.72□□□□□ -0.21
TMEM258-203ENST00000535297 APC2O95996 2303 aa13.72□□□□□ -0.21
TMEM258-203ENST00000535297 TRABD2BA6NFA1 517 aa13.72□□□□□ -0.21
TMEM258-203ENST00000535297 STK10O94804 968 aaKnown RBP13.72□□□□□ -0.21
TMEM258-203ENST00000535297 PTMAP06454 111 aaKnown RBP13.72□□□□□ -0.21
TMEM258-203ENST00000535297 PIRTP0C851 137 aa13.72□□□□□ -0.21
TMEM258-203ENST00000535297 HLA-DPA1P20036 260 aa13.72□□□□□ -0.21
TMEM258-203ENST00000535297 GNPDA1P46926 289 aa13.72□□□□□ -0.21
TMEM258-203ENST00000535297 GEMP55040 296 aa13.72□□□□□ -0.21
TMEM258-203ENST00000535297 ILF3Q12906 894 aaKnown RBP eCLIP13.72□□□□□ -0.21
TMEM258-203ENST00000535297 PERM1Q5SV97 790 aa13.72□□□□□ -0.21
TMEM258-203ENST00000535297 PDPK2PQ6A1A2 396 aa13.72□□□□□ -0.21
TMEM258-203ENST00000535297 DARS2Q6PI48 645 aaKnown RBP13.72□□□□□ -0.21
TMEM258-203ENST00000535297 OGFOD3Q6PK18 319 aa13.72□□□□□ -0.21
TMEM258-203ENST00000535297 DOK6Q6PKX4 331 aa13.72□□□□□ -0.21
TMEM258-203ENST00000535297 GPR156Q8NFN8 814 aa13.72□□□□□ -0.21
TMEM258-203ENST00000535297 WDR48Q8TAF3 677 aa13.72□□□□□ -0.21
TMEM258-203ENST00000535297 EID2BQ96D98 161 aa13.72□□□□□ -0.21
TMEM258-203ENST00000535297 MRGPRX2Q96LB1 330 aa13.72□□□□□ -0.21
TMEM258-203ENST00000535297 DEPDC7Q96QD5 511 aa13.72□□□□□ -0.21
TMEM258-203ENST00000535297 OR2M4Q96R27 311 aa13.72□□□□□ -0.21
TMEM258-203ENST00000535297 GPR63Q9BZJ6 419 aa13.72□□□□□ -0.21
TMEM258-203ENST00000535297 ABCG4Q9H172 646 aa13.72□□□□□ -0.21
TMEM258-203ENST00000535297 TRABDQ9H4I3 376 aa13.72□□□□□ -0.21
TMEM258-203ENST00000535297 VPS18Q9P253 973 aa13.72□□□□□ -0.21
TMEM258-203ENST00000535297 GULP1Q9UBP9 304 aa13.72□□□□□ -0.21
TMEM258-203ENST00000535297 GUCA1BQ9UMX6 200 aa13.72□□□□□ -0.21
TMEM258-203ENST00000535297 SHOC2Q9UQ13 582 aa13.72□□□□□ -0.21
TMEM258-203ENST00000535297 ASPMQ8IZT6 3477 aa13.71□□□□□ -0.21
TMEM258-203ENST00000535297 FADS2P1A8MWK0 482 aa13.71□□□□□ -0.21
TMEM258-203ENST00000535297 INPP4BO15327 924 aa13.71□□□□□ -0.21
TMEM258-203ENST00000535297 KCNN4O15554 427 aa13.71□□□□□ -0.21
TMEM258-203ENST00000535297 NOBOXO60393 691 aa13.71□□□□□ -0.21
TMEM258-203ENST00000535297 ANXA9O76027 345 aa13.71□□□□□ -0.21
TMEM258-203ENST00000535297 SLC4A1P02730 911 aa13.71□□□□□ -0.21
TMEM258-203ENST00000535297 FUCA1P04066 466 aa13.71□□□□□ -0.21
TMEM258-203ENST00000535297 FGF1P05230 155 aa13.71□□□□□ -0.21
TMEM258-203ENST00000535297 POLD2P49005 469 aa13.71□□□□□ -0.21
TMEM258-203ENST00000535297 KLF1Q13351 362 aaPredicted RBP13.71□□□□□ -0.21
TMEM258-203ENST00000535297 PEX6Q13608 980 aa13.71□□□□□ -0.21
TMEM258-203ENST00000535297 SIRPB2Q5JXA9 342 aa13.71□□□□□ -0.21
TMEM258-203ENST00000535297 ZNF569Q5MCW4 686 aa13.71□□□□□ -0.21
TMEM258-203ENST00000535297 ZNF662Q6ZS27 426 aa13.71□□□□□ -0.21
TMEM258-203ENST00000535297 TRIM74Q86UV6 250 aa13.71□□□□□ -0.21
TMEM258-203ENST00000535297 PROSER1Q86XN7 944 aa13.71□□□□□ -0.21
TMEM258-203ENST00000535297 NRROSQ86YC3 692 aa13.71□□□□□ -0.21
TMEM258-203ENST00000535297 FAM46DQ8NEK8 389 aa13.71□□□□□ -0.21
TMEM258-203ENST00000535297 IPMKQ8NFU5 416 aa13.71□□□□□ -0.21
TMEM258-203ENST00000535297 CCL4L1Q8NHW4 92 aa13.71□□□□□ -0.21
TMEM258-203ENST00000535297 PTCD2Q8WV60 388 aaKnown RBP13.71□□□□□ -0.21
TMEM258-203ENST00000535297 SPATA13Q96N96 652 aa13.71□□□□□ -0.21
TMEM258-203ENST00000535297 PPP1R2P1Q96PQ5 205 aa13.71□□□□□ -0.21
TMEM258-203ENST00000535297 ZSCAN5AQ9BUG6 496 aa13.71□□□□□ -0.21
TMEM258-203ENST00000535297 FSD1LQ9BXM9 530 aa13.71□□□□□ -0.21
TMEM258-203ENST00000535297 NRSN2Q9GZP1 204 aa13.71□□□□□ -0.21
TMEM258-203ENST00000535297 SUDS3Q9H7L9 328 aaPredicted RBP13.71□□□□□ -0.21
TMEM258-203ENST00000535297 C10orf88Q9H8K7 445 aa13.71□□□□□ -0.21
TMEM258-203ENST00000535297 HACD3Q9P035 362 aa13.71□□□□□ -0.21
TMEM258-203ENST00000535297 CNOT6Q9ULM6 557 aaKnown RBP13.71□□□□□ -0.21
TMEM258-203ENST00000535297 SPO11Q9Y5K1 396 aa13.71□□□□□ -0.21
TMEM258-203ENST00000535297 ZFC3H1O60293 1989 aaKnown RBP13.71□□□□□ -0.22
TMEM258-203ENST00000535297 B4DGG1 531 aa13.7□□□□□ -0.22
TMEM258-203ENST00000535297 F5H423 210 aaPredicted RBP13.7□□□□□ -0.22
TMEM258-203ENST00000535297 NRDCO43847 1150 aa13.7□□□□□ -0.22
TMEM258-203ENST00000535297 TCEA3O75764 348 aa13.7□□□□□ -0.22
TMEM258-203ENST00000535297 CCDC175P0C221 793 aa13.7□□□□□ -0.22
TMEM258-203ENST00000535297 BPIP17213 487 aa13.7□□□□□ -0.22
TMEM258-203ENST00000535297 ADCY8P40145 1251 aa13.7□□□□□ -0.22
TMEM258-203ENST00000535297 LRP8Q14114 963 aa13.7□□□□□ -0.22
TMEM258-203ENST00000535297 SLC1A5Q15758 541 aa13.7□□□□□ -0.22
TMEM258-203ENST00000535297 C14orf28Q4W4Y0 310 aa13.7□□□□□ -0.22
TMEM258-203ENST00000535297 ANKRD20A2Q5SQ80 823 aa13.7□□□□□ -0.22
TMEM258-203ENST00000535297 CERCAMQ5T4B2 595 aa13.7□□□□□ -0.22
TMEM258-203ENST00000535297 SEL1L2Q5TEA6 688 aa13.7□□□□□ -0.22
TMEM258-203ENST00000535297 ANKRD20A1Q5TYW2 823 aa13.7□□□□□ -0.22
TMEM258-203ENST00000535297 ANKRD20A3Q5VUR7 823 aa13.7□□□□□ -0.22
TMEM258-203ENST00000535297 ALS2CLQ60I27 953 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms