RNA–Protein interactions for RNA: ENST00000535005.5

SCARB1-204, Transcript of scavenger receptor class B member 1, humanhuman

TSL 1 (best)

Gene SCARB1, Length 1,845 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-204ENST00000535005 XPAP23025 273 aaPredicted RBP12.28□□□□□ -0.44
SCARB1-204ENST00000535005 PSMA3P25788 255 aa12.28□□□□□ -0.44
SCARB1-204ENST00000535005 MGAT1P26572 445 aa12.28□□□□□ -0.44
SCARB1-204ENST00000535005 PTPN4P29074 926 aa12.28□□□□□ -0.44
SCARB1-204ENST00000535005 HOXA6P31267 233 aa12.28□□□□□ -0.44
SCARB1-204ENST00000535005 VHLP40337 213 aa12.28□□□□□ -0.44
SCARB1-204ENST00000535005 ELP6Q0PNE2 266 aa12.28□□□□□ -0.44
SCARB1-204ENST00000535005 LAMB3Q13751 1172 aa12.28□□□□□ -0.44
SCARB1-204ENST00000535005 PDK4Q16654 411 aa12.28□□□□□ -0.44
SCARB1-204ENST00000535005 POM121L1PQ3SYA9 428 aa12.28□□□□□ -0.44
SCARB1-204ENST00000535005 PCID2Q5JVF3 399 aa12.28□□□□□ -0.44
SCARB1-204ENST00000535005 PIP5KL1Q5T9C9 394 aa12.28□□□□□ -0.44
SCARB1-204ENST00000535005 AGBL4Q5VU57 503 aa12.28□□□□□ -0.44
SCARB1-204ENST00000535005 DPPA4Q7L190 304 aa12.28□□□□□ -0.44
SCARB1-204ENST00000535005 UHMK1Q8TAS1 419 aaKnown RBP12.28□□□□□ -0.44
SCARB1-204ENST00000535005 SMIM14Q96QK8 99 aa12.28□□□□□ -0.44
SCARB1-204ENST00000535005 C19orf43Q9BQ61 176 aa12.28□□□□□ -0.44
SCARB1-204ENST00000535005 NAT9Q9BTE0 207 aa12.28□□□□□ -0.44
SCARB1-204ENST00000535005 SLC6A17Q9H1V8 727 aa12.28□□□□□ -0.44
SCARB1-204ENST00000535005 MRM3Q9HC36 420 aaKnown RBP12.28□□□□□ -0.44
SCARB1-204ENST00000535005 PCDH12Q9NPG4 1184 aa12.28□□□□□ -0.44
SCARB1-204ENST00000535005 PIH1D1Q9NWS0 290 aaKnown RBP12.28□□□□□ -0.44
SCARB1-204ENST00000535005 FBXL12Q9NXK8 326 aa12.28□□□□□ -0.44
SCARB1-204ENST00000535005 NINJ2Q9NZG7 142 aa12.28□□□□□ -0.44
SCARB1-204ENST00000535005 USP36Q9P275 1121 aaKnown RBP12.28□□□□□ -0.44
SCARB1-204ENST00000535005 EBF1Q9UH73 591 aa12.28□□□□□ -0.44
SCARB1-204ENST00000535005 RIMKLBQ9ULI2 386 aa12.28□□□□□ -0.44
SCARB1-204ENST00000535005 TEX264Q9Y6I9 313 aa12.28□□□□□ -0.44
SCARB1-204ENST00000535005 DPPA5A6NC42 116 aa12.27□□□□□ -0.44
SCARB1-204ENST00000535005 SPINT1O43278 529 aa12.27□□□□□ -0.44
SCARB1-204ENST00000535005 SMIM24O75264 130 aa12.27□□□□□ -0.44
SCARB1-204ENST00000535005 ASMTLO95671 621 aa12.27□□□□□ -0.44
SCARB1-204ENST00000535005 ALPIP09923 528 aa12.27□□□□□ -0.44
SCARB1-204ENST00000535005 ACADMP11310 421 aa12.27□□□□□ -0.44
SCARB1-204ENST00000535005 VIPR1P32241 457 aa12.27□□□□□ -0.44
SCARB1-204ENST00000535005 MMP12P39900 470 aa12.27□□□□□ -0.44
SCARB1-204ENST00000535005 PDIA2Q13087 525 aaKnown RBP12.27□□□□□ -0.44
SCARB1-204ENST00000535005 TAF1AQ15573 450 aaPredicted RBP12.27□□□□□ -0.44
SCARB1-204ENST00000535005 GSTA3Q16772 222 aa12.27□□□□□ -0.44
SCARB1-204ENST00000535005 BBS9Q3SYG4 887 aa12.27□□□□□ -0.44
SCARB1-204ENST00000535005 TMEM52BQ4KMG9 183 aa12.27□□□□□ -0.44
SCARB1-204ENST00000535005 ERAP2Q6P179 960 aa12.27□□□□□ -0.44
SCARB1-204ENST00000535005 CRTC1Q6UUV9 634 aa12.27□□□□□ -0.44
SCARB1-204ENST00000535005 CCNJLQ8IV13 435 aa12.27□□□□□ -0.44
SCARB1-204ENST00000535005 RAVER1Q8IY67 606 aaKnown RBP12.27□□□□□ -0.44
SCARB1-204ENST00000535005 CBARPQ8N350 705 aaPredicted RBP12.27□□□□□ -0.44
SCARB1-204ENST00000535005 TTC30BQ8N4P2 665 aa12.27□□□□□ -0.44
SCARB1-204ENST00000535005 MDGA1Q8NFP4 955 aa12.27□□□□□ -0.44
SCARB1-204ENST00000535005 PEX13Q92968 403 aa12.27□□□□□ -0.44
SCARB1-204ENST00000535005 ERP27Q96DN0 273 aa12.27□□□□□ -0.44
SCARB1-204ENST00000535005 EBNA1BP2Q99848 306 aaKnown RBP12.27□□□□□ -0.44
SCARB1-204ENST00000535005 OMDQ99983 421 aa12.27□□□□□ -0.44
SCARB1-204ENST00000535005 KIFC1Q9BW19 673 aa12.27□□□□□ -0.44
SCARB1-204ENST00000535005 MMADHCQ9H3L0 296 aaPredicted RBP12.27□□□□□ -0.44
SCARB1-204ENST00000535005 B4GALT6Q9UBX8 382 aa12.27□□□□□ -0.44
SCARB1-204ENST00000535005 SCOCQ9UIL1 159 aa12.27□□□□□ -0.44
SCARB1-204ENST00000535005 NCKAP1Q9Y2A7 1128 aa12.27□□□□□ -0.44
SCARB1-204ENST00000535005 ZNF711Q9Y462 761 aa12.27□□□□□ -0.44
SCARB1-204ENST00000535005 FADS3Q9Y5Q0 445 aa12.27□□□□□ -0.44
SCARB1-204ENST00000535005 A0A1W2PP55 124 aa12.27□□□□□ -0.45
SCARB1-204ENST00000535005 HEATR9A2RTY3 570 aa12.27□□□□□ -0.45
SCARB1-204ENST00000535005 EME2A4GXA9 379 aaPredicted RBP12.27□□□□□ -0.45
SCARB1-204ENST00000535005 MROH6A6NGR9 719 aa12.27□□□□□ -0.45
SCARB1-204ENST00000535005 NPIPB15A6NHN6 443 aaPredicted RBP12.27□□□□□ -0.45
SCARB1-204ENST00000535005 H0Y858 1186 aa12.27□□□□□ -0.45
SCARB1-204ENST00000535005 K7ESF4 209 aa12.27□□□□□ -0.45
SCARB1-204ENST00000535005 PDLIM1O00151 329 aa12.27□□□□□ -0.45
SCARB1-204ENST00000535005 NVLO15381 856 aaKnown RBP12.27□□□□□ -0.45
SCARB1-204ENST00000535005 LDB2O43679 373 aa12.27□□□□□ -0.45
SCARB1-204ENST00000535005 EDF1O60869 148 aaKnown RBP12.27□□□□□ -0.45
SCARB1-204ENST00000535005 RNASEH2AO75792 299 aaKnown RBP12.27□□□□□ -0.45
SCARB1-204ENST00000535005 CRTAMO95727 393 aa12.27□□□□□ -0.45
SCARB1-204ENST00000535005 PIRTP0C851 137 aa12.27□□□□□ -0.45
SCARB1-204ENST00000535005 ZNF30P17039 623 aa12.27□□□□□ -0.45
SCARB1-204ENST00000535005 TAS2R38P59533 333 aa12.27□□□□□ -0.45
SCARB1-204ENST00000535005 PDE1BQ01064 536 aa12.27□□□□□ -0.45
SCARB1-204ENST00000535005 MPP2Q14168 576 aa12.27□□□□□ -0.45
SCARB1-204ENST00000535005 POU6F1Q14863 301 aa12.27□□□□□ -0.45
SCARB1-204ENST00000535005 PTPRRQ15256 657 aa12.27□□□□□ -0.45
SCARB1-204ENST00000535005 KIAA1324Q6UXG2 1013 aaKnown RBP12.27□□□□□ -0.45
SCARB1-204ENST00000535005 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP12.27□□□□□ -0.45
SCARB1-204ENST00000535005 NLRP9Q7RTR0 991 aa12.27□□□□□ -0.45
SCARB1-204ENST00000535005 MPP5Q8N3R9 675 aa12.27□□□□□ -0.45
SCARB1-204ENST00000535005 GDAP1Q8TB36 358 aa12.27□□□□□ -0.45
SCARB1-204ENST00000535005 BLOC1S5Q8TDH9 187 aa12.27□□□□□ -0.45
SCARB1-204ENST00000535005 DENND1AQ8TEH3 1009 aa12.27□□□□□ -0.45
SCARB1-204ENST00000535005 HMGB4Q8WW32 186 aa12.27□□□□□ -0.45
SCARB1-204ENST00000535005 PBXIP1Q96AQ6 731 aa12.27□□□□□ -0.45
SCARB1-204ENST00000535005 HHIPQ96QV1 700 aa12.27□□□□□ -0.45
SCARB1-204ENST00000535005 TBC1D10AQ9BXI6 508 aa12.27□□□□□ -0.45
SCARB1-204ENST00000535005 SYBUQ9NX95 663 aa12.27□□□□□ -0.45
SCARB1-204ENST00000535005 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP12.27□□□□□ -0.453e-8■□□□□ 11
SCARB1-204ENST00000535005 NKX1-2Q9UD57 310 aaPredicted RBP12.27□□□□□ -0.45
SCARB1-204ENST00000535005 SERGEFQ9UGK8 458 aa12.27□□□□□ -0.45
SCARB1-204ENST00000535005 FETUBQ9UGM5 382 aa12.27□□□□□ -0.45
SCARB1-204ENST00000535005 GGT7Q9UJ14 662 aa12.27□□□□□ -0.45
SCARB1-204ENST00000535005 SOX13Q9UN79 622 aa12.27□□□□□ -0.45
SCARB1-204ENST00000535005 TCAF1Q9Y4C2 921 aa12.27□□□□□ -0.45
SCARB1-204ENST00000535005 FAM237BA0A1B0GVD1 139 aa12.26□□□□□ -0.45
SCARB1-204ENST00000535005 ENO4A6NNW6 628 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms