RNA–Protein interactions for RNA: ENST00000534699.5

CSDE1-217, Transcript of cold shock domain containing E1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CSDE1, Length 2,667 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-217ENST00000534699 PJA2O43164 708 aa10.33□□□□□ -0.76
CSDE1-217ENST00000534699 SPOPO43791 374 aa10.33□□□□□ -0.76
CSDE1-217ENST00000534699 HLA-DPA1P20036 260 aa10.33□□□□□ -0.76
CSDE1-217ENST00000534699 ADCY8P40145 1251 aa10.33□□□□□ -0.76
CSDE1-217ENST00000534699 TSPAN7P41732 249 aa10.33□□□□□ -0.76
CSDE1-217ENST00000534699 CCL7P80098 99 aa10.33□□□□□ -0.76
CSDE1-217ENST00000534699 PDE1BQ01064 536 aa10.33□□□□□ -0.76
CSDE1-217ENST00000534699 GBE1Q04446 702 aa10.33□□□□□ -0.76
CSDE1-217ENST00000534699 CDK18Q07002 472 aa10.33□□□□□ -0.76
CSDE1-217ENST00000534699 SLC10A2Q12908 348 aaPredicted RBP10.33□□□□□ -0.76
CSDE1-217ENST00000534699 AGAP9Q5VTM2 703 aa10.33□□□□□ -0.76
CSDE1-217ENST00000534699 ITPRIPL1Q6GPH6 555 aa10.33□□□□□ -0.76
CSDE1-217ENST00000534699 SPOCD1Q6ZMY3 1216 aa10.33□□□□□ -0.76
CSDE1-217ENST00000534699 BBS12Q6ZW61 710 aa10.33□□□□□ -0.76
CSDE1-217ENST00000534699 NRROSQ86YC3 692 aa10.33□□□□□ -0.76
CSDE1-217ENST00000534699 TP53INP2Q8IXH6 220 aa10.33□□□□□ -0.76
CSDE1-217ENST00000534699 FBXO39Q8N4B4 442 aa10.33□□□□□ -0.76
CSDE1-217ENST00000534699 HEXDCQ8WVB3 486 aa10.33□□□□□ -0.76
CSDE1-217ENST00000534699 CHP1Q99653 195 aa10.33□□□□□ -0.76
CSDE1-217ENST00000534699 CMKLR1Q99788 373 aa10.33□□□□□ -0.76
CSDE1-217ENST00000534699 DDA1Q9BW61 102 aa10.33□□□□□ -0.76
CSDE1-217ENST00000534699 PACSIN1Q9BY11 444 aa10.33□□□□□ -0.76
CSDE1-217ENST00000534699 ZCCHC2Q9C0B9 1178 aaKnown RBP10.33□□□□□ -0.76
CSDE1-217ENST00000534699 TRIM39Q9HCM9 518 aa10.33□□□□□ -0.76
CSDE1-217ENST00000534699 LRIT1Q9P2V4 623 aa10.33□□□□□ -0.76
CSDE1-217ENST00000534699 ATXN7L1Q9ULK2 861 aaPredicted RBP10.33□□□□□ -0.76
CSDE1-217ENST00000534699 SUFUQ9UMX1 484 aa10.33□□□□□ -0.76
CSDE1-217ENST00000534699 MAP1BP46821 2468 aaKnown RBP10.33□□□□□ -0.76
CSDE1-217ENST00000534699 MYO15AQ9UKN7 3530 aa10.33□□□□□ -0.76
CSDE1-217ENST00000534699 LILRA5A6NI73 299 aa10.32□□□□□ -0.76
CSDE1-217ENST00000534699 PSMD3O43242 534 aa10.32□□□□□ -0.76
CSDE1-217ENST00000534699 SOD1P00441 154 aa10.32□□□□□ -0.76
CSDE1-217ENST00000534699 JCHAINP01591 159 aa10.32□□□□□ -0.76
CSDE1-217ENST00000534699 RPLP0P05388 317 aaKnown RBP10.32□□□□□ -0.76
CSDE1-217ENST00000534699 GSTM1P09488 218 aa10.32□□□□□ -0.76
CSDE1-217ENST00000534699 SFTPCP11686 197 aa10.32□□□□□ -0.76
CSDE1-217ENST00000534699 ETV3P41162 512 aa10.32□□□□□ -0.76
CSDE1-217ENST00000534699 RAB15P59190 212 aa10.32□□□□□ -0.76
CSDE1-217ENST00000534699 MAXP61244 160 aa10.32□□□□□ -0.76
CSDE1-217ENST00000534699 GSTM4Q03013 218 aa10.32□□□□□ -0.76
CSDE1-217ENST00000534699 TLE3Q04726 772 aa10.32□□□□□ -0.76
CSDE1-217ENST00000534699 MAP7Q14244 749 aa10.32□□□□□ -0.76
CSDE1-217ENST00000534699 CHCHD2P9Q5T1J5 151 aaPredicted RBP10.32□□□□□ -0.76
CSDE1-217ENST00000534699 WDR74Q6RFH5 385 aaPredicted RBP10.32□□□□□ -0.76
CSDE1-217ENST00000534699 SLC9B2Q86UD5 537 aa10.32□□□□□ -0.76
CSDE1-217ENST00000534699 SLITRK4Q8IW52 837 aa10.32□□□□□ -0.76
CSDE1-217ENST00000534699 SPACA3Q8IXA5 215 aa10.32□□□□□ -0.76
CSDE1-217ENST00000534699 TC2NQ8N9U0 490 aa10.32□□□□□ -0.76
CSDE1-217ENST00000534699 ZFPM2Q8WW38 1151 aa10.32□□□□□ -0.76
CSDE1-217ENST00000534699 LGMNQ99538 433 aa10.32□□□□□ -0.76
CSDE1-217ENST00000534699 FRMD8P1Q9BZ68 369 aaPredicted RBP10.32□□□□□ -0.76
CSDE1-217ENST00000534699 TRIM5Q9C035 493 aa10.32□□□□□ -0.76
CSDE1-217ENST00000534699 TMEM168Q9H0V1 697 aa10.32□□□□□ -0.76
CSDE1-217ENST00000534699 ZFYVE1Q9HBF4 777 aa10.32□□□□□ -0.76
CSDE1-217ENST00000534699 FAM153AQ9UHL3 310 aa10.32□□□□□ -0.76
CSDE1-217ENST00000534699 SATB2Q9UPW6 733 aa10.32□□□□□ -0.76
CSDE1-217ENST00000534699 PCDHA13Q9Y5I0 950 aa10.32□□□□□ -0.76
CSDE1-217ENST00000534699 CACNA1BQ00975 2339 aa10.32□□□□□ -0.76
CSDE1-217ENST00000534699 LOC285095A0A1B0GVY8 99 aa10.32□□□□□ -0.76
CSDE1-217ENST00000534699 ANXA9O76027 345 aa10.32□□□□□ -0.76
CSDE1-217ENST00000534699 CDC25BP30305 580 aa10.32□□□□□ -0.76
CSDE1-217ENST00000534699 VAC14Q08AM6 782 aa10.32□□□□□ -0.76
CSDE1-217ENST00000534699 ATP13A4Q4VNC1 1196 aa10.32□□□□□ -0.76
CSDE1-217ENST00000534699 TMEM164Q5U3C3 297 aa10.32□□□□□ -0.76
CSDE1-217ENST00000534699 RAB11FIP2Q7L804 512 aa10.32□□□□□ -0.76
CSDE1-217ENST00000534699 PIM3Q86V86 326 aa10.32□□□□□ -0.76
CSDE1-217ENST00000534699 KLHDC8BQ8IXV7 354 aa10.32□□□□□ -0.76
CSDE1-217ENST00000534699 SYCE1Q8N0S2 351 aa10.32□□□□□ -0.76
CSDE1-217ENST00000534699 TTC13Q8NBP0 860 aa10.32□□□□□ -0.76
CSDE1-217ENST00000534699 P3H4Q92791 437 aa10.32□□□□□ -0.76
CSDE1-217ENST00000534699 ZNF514Q96K75 400 aaPredicted RBP10.32□□□□□ -0.76
CSDE1-217ENST00000534699 QKIQ96PU8 341 aaKnown RBP eCLIP10.32□□□□□ -0.762e-14■■■□□ 16.7
CSDE1-217ENST00000534699 EFHD1Q9BUP0 239 aa10.32□□□□□ -0.76
CSDE1-217ENST00000534699 TRIT1Q9H3H1 467 aaKnown RBP10.32□□□□□ -0.76
CSDE1-217ENST00000534699 CHKBQ9Y259 395 aa10.32□□□□□ -0.76
CSDE1-217ENST00000534699 PCDHB1Q9Y5F3 818 aa10.32□□□□□ -0.76
CSDE1-217ENST00000534699 ALG6Q9Y672 507 aa10.32□□□□□ -0.76
CSDE1-217ENST00000534699 RNF215Q9Y6U7 377 aa10.32□□□□□ -0.76
CSDE1-217ENST00000534699 APOC4-APOC2K7ER74 178 aa10.31□□□□□ -0.76
CSDE1-217ENST00000534699 CHUKO15111 745 aa10.31□□□□□ -0.76
CSDE1-217ENST00000534699 KMOO15229 486 aa10.31□□□□□ -0.76
CSDE1-217ENST00000534699 NUAK1O60285 661 aa10.31□□□□□ -0.76
CSDE1-217ENST00000534699 DNAJC6O75061 913 aa10.31□□□□□ -0.76
CSDE1-217ENST00000534699 STK10O94804 968 aaKnown RBP10.31□□□□□ -0.76
CSDE1-217ENST00000534699 APOC2P02655 101 aa10.31□□□□□ -0.76
CSDE1-217ENST00000534699 VCLP18206 1134 aa10.31□□□□□ -0.76
CSDE1-217ENST00000534699 COMTP21964 271 aa10.31□□□□□ -0.76
CSDE1-217ENST00000534699 UGT1A5P35504 534 aa10.31□□□□□ -0.76
CSDE1-217ENST00000534699 GEMP55040 296 aa10.31□□□□□ -0.76
CSDE1-217ENST00000534699 RD3Q7Z3Z2 195 aa10.31□□□□□ -0.76
CSDE1-217ENST00000534699 CDKL3Q8IVW4 592 aaPredicted RBP10.31□□□□□ -0.76
CSDE1-217ENST00000534699 CARFQ8N187 725 aa10.31□□□□□ -0.76
CSDE1-217ENST00000534699 CNTD1Q8N815 330 aa10.31□□□□□ -0.76
CSDE1-217ENST00000534699 LPCAT1Q8NF37 534 aa10.31□□□□□ -0.76
CSDE1-217ENST00000534699 ATXN7L3BQ96GX2 97 aa10.31□□□□□ -0.76
CSDE1-217ENST00000534699 DPEP2Q9H4A9 486 aa10.31□□□□□ -0.76
CSDE1-217ENST00000534699 SMOXQ9NWM0 555 aa10.31□□□□□ -0.76
CSDE1-217ENST00000534699 PCDHA3Q9Y5H8 950 aa10.31□□□□□ -0.76
CSDE1-217ENST00000534699 hCG_1818297A0A087WSY0 165 aa10.31□□□□□ -0.76
CSDE1-217ENST00000534699 C1orf232A0A0U1RR37 186 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms