RNA–Protein interactions for RNA: ENST00000534647.1

CTNND1-238, Transcript of catenin delta 1, human

TSL 5

Gene CTNND1, Length 866 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CTNND1-238	ENST00000534647	OR1D5	P58170	312 aa		11.52	□□□□□ -0.57
CTNND1-238	ENST00000534647	DPT	Q07507	201 aa		11.52	□□□□□ -0.57
CTNND1-238	ENST00000534647	LBR	Q14739	615 aa	Known RBP	11.52	□□□□□ -0.57
CTNND1-238	ENST00000534647	CA9	Q16790	459 aa		11.52	□□□□□ -0.57
CTNND1-238	ENST00000534647	MAP9	Q49MG5	647 aa		11.52	□□□□□ -0.57
CTNND1-238	ENST00000534647	RALGPS1	Q5JS13	557 aa		11.52	□□□□□ -0.57
CTNND1-238	ENST00000534647	DNTTIP2	Q5QJE6	756 aa	Known RBP	11.52	□□□□□ -0.57
CTNND1-238	ENST00000534647	CYP4V2	Q6ZWL3	525 aa	Predicted RBP	11.52	□□□□□ -0.57
CTNND1-238	ENST00000534647	IRF2BP2	Q7Z5L9	587 aa		11.52	□□□□□ -0.57
CTNND1-238	ENST00000534647	VASH2	Q86V25	355 aa		11.52	□□□□□ -0.57
CTNND1-238	ENST00000534647	NLRP8	Q86W28	1048 aa		11.52	□□□□□ -0.57
CTNND1-238	ENST00000534647	TC2N	Q8N9U0	490 aa		11.52	□□□□□ -0.57
CTNND1-238	ENST00000534647	OR4D9	Q8NGE8	314 aa		11.52	□□□□□ -0.57
CTNND1-238	ENST00000534647	ZDHHC1	Q8WTX9	485 aa		11.52	□□□□□ -0.57
CTNND1-238	ENST00000534647	HTR3C	Q8WXA8	447 aa		11.52	□□□□□ -0.57
CTNND1-238	ENST00000534647	NKD1	Q969G9	470 aa		11.52	□□□□□ -0.57
CTNND1-238	ENST00000534647	NUS1	Q96E22	293 aa		11.52	□□□□□ -0.57
CTNND1-238	ENST00000534647	THAP11	Q96EK4	314 aa		11.52	□□□□□ -0.57
CTNND1-238	ENST00000534647	SCRN2	Q96FV2	425 aa		11.52	□□□□□ -0.57
CTNND1-238	ENST00000534647	DDA1	Q9BW61	102 aa		11.52	□□□□□ -0.57
CTNND1-238	ENST00000534647	SAP130	Q9H0E3	1048 aa		11.52	□□□□□ -0.57
CTNND1-238	ENST00000534647	SLC25A18	Q9H1K4	315 aa		11.52	□□□□□ -0.57
CTNND1-238	ENST00000534647	DHX35	Q9H5Z1	703 aa	Known RBP	11.52	□□□□□ -0.57
CTNND1-238	ENST00000534647	CARS2	Q9HA77	564 aa	Known RBP	11.52	□□□□□ -0.57
CTNND1-238	ENST00000534647	SP110	Q9HB58	689 aa		11.52	□□□□□ -0.57
CTNND1-238	ENST00000534647	RDH14	Q9HBH5	336 aa		11.52	□□□□□ -0.57
CTNND1-238	ENST00000534647	ZNHIT6	Q9NWK9	470 aa	Known RBP	11.52	□□□□□ -0.57
CTNND1-238	ENST00000534647	GPATCH2L	Q9NWQ4	482 aa		11.52	□□□□□ -0.57
CTNND1-238	ENST00000534647	TAAR2	Q9P1P5	351 aa		11.52	□□□□□ -0.57
CTNND1-238	ENST00000534647	PDP2	Q9P2J9	529 aa		11.52	□□□□□ -0.57
CTNND1-238	ENST00000534647	B4GALT6	Q9UBX8	382 aa		11.52	□□□□□ -0.57
CTNND1-238	ENST00000534647	TUBD1	Q9UJT1	453 aa		11.52	□□□□□ -0.57
CTNND1-238	ENST00000534647	MYO6	Q9UM54	1294 aa		11.52	□□□□□ -0.57
CTNND1-238	ENST00000534647	SLC17A4	Q9Y2C5	497 aa		11.52	□□□□□ -0.57
CTNND1-238	ENST00000534647	LUC7L2	Q9Y383	392 aa	Known RBP	11.52	□□□□□ -0.57
CTNND1-238	ENST00000534647	PPIL1	Q9Y3C6	166 aa		11.52	□□□□□ -0.57
CTNND1-238	ENST00000534647	DFFA	O00273	331 aa		11.51	□□□□□ -0.57
CTNND1-238	ENST00000534647	RNF8	O76064	485 aa		11.51	□□□□□ -0.57
CTNND1-238	ENST00000534647	ECEL1	O95672	775 aa		11.51	□□□□□ -0.57
CTNND1-238	ENST00000534647	PEX11B	O96011	259 aa		11.51	□□□□□ -0.57
CTNND1-238	ENST00000534647	GYPC	P04921	128 aa		11.51	□□□□□ -0.57
CTNND1-238	ENST00000534647	IVL	P07476	585 aa		11.51	□□□□□ -0.57
CTNND1-238	ENST00000534647	PSMA2	P25787	234 aa		11.51	□□□□□ -0.57
CTNND1-238	ENST00000534647	ALDH4A1	P30038	563 aa		11.51	□□□□□ -0.57
CTNND1-238	ENST00000534647	VIPR1	P32241	457 aa		11.51	□□□□□ -0.57
CTNND1-238	ENST00000534647	ARSD	P51689	593 aa		11.51	□□□□□ -0.57
CTNND1-238	ENST00000534647	MAZ	P56270	477 aa	Known RBP	11.51	□□□□□ -0.57
CTNND1-238	ENST00000534647	CDK3	Q00526	305 aa		11.51	□□□□□ -0.57
CTNND1-238	ENST00000534647	SLC10A7	Q0GE19	358 aa		11.51	□□□□□ -0.57
CTNND1-238	ENST00000534647	DPYS	Q14117	519 aa		11.51	□□□□□ -0.57
CTNND1-238	ENST00000534647	CNGA3	Q16281	694 aa		11.51	□□□□□ -0.57
CTNND1-238	ENST00000534647	ARHGAP36	Q6ZRI8	547 aa		11.51	□□□□□ -0.57
CTNND1-238	ENST00000534647	HEATR4	Q86WZ0	1026 aa		11.51	□□□□□ -0.57
CTNND1-238	ENST00000534647	NAGS	Q8N159	534 aa		11.51	□□□□□ -0.57
CTNND1-238	ENST00000534647	NPW	Q8N729	165 aa		11.51	□□□□□ -0.57
CTNND1-238	ENST00000534647	AGBL5	Q8NDL9	886 aa		11.51	□□□□□ -0.57
CTNND1-238	ENST00000534647	DTD2	Q96FN9	168 aa		11.51	□□□□□ -0.57
CTNND1-238	ENST00000534647	MCCC1	Q96RQ3	725 aa	Predicted RBP	11.51	□□□□□ -0.57
CTNND1-238	ENST00000534647	NUDCD1	Q96RS6	583 aa		11.51	□□□□□ -0.57
CTNND1-238	ENST00000534647	PEBP4	Q96S96	227 aa		11.51	□□□□□ -0.57
CTNND1-238	ENST00000534647	KCTD15	Q96SI1	283 aa	Predicted RBP	11.51	□□□□□ -0.57
CTNND1-238	ENST00000534647	NUDT22	Q9BRQ3	303 aa		11.51	□□□□□ -0.57
CTNND1-238	ENST00000534647	SNRNP25	Q9BV90	132 aa	Known RBP	11.51	□□□□□ -0.57
CTNND1-238	ENST00000534647	ASPSCR1	Q9BZE9	553 aa		11.51	□□□□□ -0.57
CTNND1-238	ENST00000534647	SRA1	Q9HD15	236 aa	Known RBP	11.51	□□□□□ -0.57
CTNND1-238	ENST00000534647	SEPT11	Q9NVA2	429 aa	Known RBP	11.51	□□□□□ -0.57
CTNND1-238	ENST00000534647	ZNF358	Q9NW07	568 aa		11.51	□□□□□ -0.57
CTNND1-238	ENST00000534647	CWC15	Q9P013	229 aa	Known RBP	11.51	□□□□□ -0.57
CTNND1-238	ENST00000534647	MOSPD1	Q9UJG1	213 aa		11.51	□□□□□ -0.57
CTNND1-238	ENST00000534647	PHTF1	Q9UMS5	762 aa		11.51	□□□□□ -0.57
CTNND1-238	ENST00000534647	SUFU	Q9UMX1	484 aa		11.51	□□□□□ -0.57
CTNND1-238	ENST00000534647	ST14	Q9Y5Y6	855 aa		11.51	□□□□□ -0.57
CTNND1-238	ENST00000534647	IGHV1OR21-1	A0A087WYE8	117 aa		11.5	□□□□□ -0.57
CTNND1-238	ENST00000534647		A0A1W2PQJ5	194 aa		11.5	□□□□□ -0.57
CTNND1-238	ENST00000534647		A8MX80	341 aa		11.5	□□□□□ -0.57
CTNND1-238	ENST00000534647		B4E171	279 aa		11.5	□□□□□ -0.57
CTNND1-238	ENST00000534647	PPM1D	O15297	605 aa		11.5	□□□□□ -0.57
CTNND1-238	ENST00000534647	CAPN5	O15484	640 aa	Predicted RBP	11.5	□□□□□ -0.57
CTNND1-238	ENST00000534647	TPD52L2	O43399	206 aa	Known RBP	11.5	□□□□□ -0.57
CTNND1-238	ENST00000534647	PRPSAP2	O60256	369 aa		11.5	□□□□□ -0.57
CTNND1-238	ENST00000534647	CYP2A6	P11509	494 aa	Predicted RBP	11.5	□□□□□ -0.57
CTNND1-238	ENST00000534647	GZMA	P12544	262 aa		11.5	□□□□□ -0.57
CTNND1-238	ENST00000534647	MIP	P30301	263 aa		11.5	□□□□□ -0.57
CTNND1-238	ENST00000534647	ADCY8	P40145	1251 aa		11.5	□□□□□ -0.57
CTNND1-238	ENST00000534647	TSPAN7	P41732	249 aa		11.5	□□□□□ -0.57
CTNND1-238	ENST00000534647	GPLD1	P80108	840 aa		11.5	□□□□□ -0.57
CTNND1-238	ENST00000534647	CTBS	Q01459	385 aa		11.5	□□□□□ -0.57
CTNND1-238	ENST00000534647	CLCA4	Q14CN2	919 aa		11.5	□□□□□ -0.57
CTNND1-238	ENST00000534647	AMZ1	Q400G9	498 aa		11.5	□□□□□ -0.57
CTNND1-238	ENST00000534647	FIGN	Q5HY92	759 aa		11.5	□□□□□ -0.57
CTNND1-238	ENST00000534647	TECPR1	Q7Z6L1	1165 aa		11.5	□□□□□ -0.57
CTNND1-238	ENST00000534647	TMTC1	Q8IUR5	882 aa		11.5	□□□□□ -0.57
CTNND1-238	ENST00000534647	RAVER1	Q8IY67	606 aa	Known RBP	11.5	□□□□□ -0.57
CTNND1-238	ENST00000534647	PAF1	Q8N7H5	531 aa		11.5	□□□□□ -0.57
CTNND1-238	ENST00000534647	OR8K1	Q8NGG5	319 aa		11.5	□□□□□ -0.57
CTNND1-238	ENST00000534647	CCDC74B	Q96LY2	380 aa		11.5	□□□□□ -0.57
CTNND1-238	ENST00000534647	MGME1	Q9BQP7	344 aa		11.5	□□□□□ -0.57
CTNND1-238	ENST00000534647	SPRY4	Q9C004	299 aa		11.5	□□□□□ -0.57
CTNND1-238	ENST00000534647	ABHD10	Q9NUJ1	306 aa		11.5	□□□□□ -0.57
CTNND1-238	ENST00000534647	SPTLC3	Q9NUV7	552 aa		11.5	□□□□□ -0.57

Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms