RNA–Protein interactions for RNA: ENST00000534551.2

VPS11-205, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 3

Gene VPS11, Length 585 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-205ENST00000534551 FUCA1P04066 466 aa13.94□□□□□ -0.18
VPS11-205ENST00000534551 CSF2P04141 144 aa13.94□□□□□ -0.18
VPS11-205ENST00000534551 MYF5P13349 255 aa13.94□□□□□ -0.18
VPS11-205ENST00000534551 DGKAP23743 735 aa13.94□□□□□ -0.18
VPS11-205ENST00000534551 CASQ1P31415 396 aa13.94□□□□□ -0.18
VPS11-205ENST00000534551 TRIM23P36406 574 aa13.94□□□□□ -0.18
VPS11-205ENST00000534551 ID4P47928 161 aa13.94□□□□□ -0.18
VPS11-205ENST00000534551 ARRB1P49407 418 aaPredicted RBP13.94□□□□□ -0.18
VPS11-205ENST00000534551 NOVA1P51513 510 aaKnown RBP13.94□□□□□ -0.18
VPS11-205ENST00000534551 ZNF140P52738 457 aaPredicted RBP13.94□□□□□ -0.18
VPS11-205ENST00000534551 DCDC1P59894 354 aa13.94□□□□□ -0.18
VPS11-205ENST00000534551 MRPS25P82663 173 aaKnown RBP13.94□□□□□ -0.18
VPS11-205ENST00000534551 GPS1Q13098 491 aa13.94□□□□□ -0.18
VPS11-205ENST00000534551 PTK2BQ14289 1009 aa13.94□□□□□ -0.18
VPS11-205ENST00000534551 KHDC1Q4VXA5 237 aaKnown RBP13.94□□□□□ -0.18
VPS11-205ENST00000534551 CCDC38Q502W7 563 aa13.94□□□□□ -0.18
VPS11-205ENST00000534551 PRRT3Q5FWE3 981 aa13.94□□□□□ -0.18
VPS11-205ENST00000534551 PSAPL1Q6NUJ1 521 aa13.94□□□□□ -0.18
VPS11-205ENST00000534551 ADAMTSL4Q6UY14 1074 aa13.94□□□□□ -0.18
VPS11-205ENST00000534551 PPP1R21Q6ZMI0 780 aa13.94□□□□□ -0.18
VPS11-205ENST00000534551 ZNF534Q76KX8 674 aa13.94□□□□□ -0.18
VPS11-205ENST00000534551 MARK2Q7KZI7 788 aaKnown RBP13.94□□□□□ -0.18
VPS11-205ENST00000534551 PIP4P1Q86T03 277 aa13.94□□□□□ -0.18
VPS11-205ENST00000534551 SLC25A45Q8N413 288 aa13.94□□□□□ -0.18
VPS11-205ENST00000534551 OXR1Q8N573 874 aa13.94□□□□□ -0.18
VPS11-205ENST00000534551 OR4K2Q8NGD2 314 aa13.94□□□□□ -0.18
VPS11-205ENST00000534551 FAM174AQ8TBP5 190 aa13.94□□□□□ -0.18
VPS11-205ENST00000534551 LMX1AQ8TE12 382 aa13.94□□□□□ -0.18
VPS11-205ENST00000534551 DNAJC1Q96KC8 554 aaKnown RBP13.94□□□□□ -0.18
VPS11-205ENST00000534551 PPP1R2P1Q96PQ5 205 aa13.94□□□□□ -0.18
VPS11-205ENST00000534551 RTKNQ9BST9 563 aa13.94□□□□□ -0.18
VPS11-205ENST00000534551 SPATA16Q9BXB7 569 aa13.94□□□□□ -0.18
VPS11-205ENST00000534551 FRMD8Q9BZ67 464 aaPredicted RBP13.94□□□□□ -0.18
VPS11-205ENST00000534551 CLPBQ9H078 707 aa13.94□□□□□ -0.18
VPS11-205ENST00000534551 FAM83DQ9H4H8 585 aa13.94□□□□□ -0.18
VPS11-205ENST00000534551 PHPT1Q9NRX4 125 aaPredicted RBP13.94□□□□□ -0.18
VPS11-205ENST00000534551 HOMER3Q9NSC5 361 aa13.94□□□□□ -0.18
VPS11-205ENST00000534551 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP13.94□□□□□ -0.18
VPS11-205ENST00000534551 IL17CQ9P0M4 197 aa13.94□□□□□ -0.18
VPS11-205ENST00000534551 FKBPLQ9UIM3 349 aa13.94□□□□□ -0.18
VPS11-205ENST00000534551 TMPRSS11EQ9UL52 423 aa13.94□□□□□ -0.18
VPS11-205ENST00000534551 PIKFYVEQ9Y2I7 2098 aa13.94□□□□□ -0.18
VPS11-205ENST00000534551 SPAARA0A1B0GVQ0 90 aa13.93□□□□□ -0.18
VPS11-205ENST00000534551 PRSS38A1L453 326 aa13.93□□□□□ -0.18
VPS11-205ENST00000534551 LDB2O43679 373 aa13.93□□□□□ -0.18
VPS11-205ENST00000534551 PCDHGA12O60330 932 aa13.93□□□□□ -0.18
VPS11-205ENST00000534551 RASGRP1O95267 797 aa13.93□□□□□ -0.18
VPS11-205ENST00000534551 GIMD1P0DJR0 217 aa13.93□□□□□ -0.18
VPS11-205ENST00000534551 HTR1BP28222 390 aa13.93□□□□□ -0.18
VPS11-205ENST00000534551 HMGCLP35914 325 aa13.93□□□□□ -0.18
VPS11-205ENST00000534551 SPAM1P38567 509 aa13.93□□□□□ -0.18
VPS11-205ENST00000534551 FNTAP49354 379 aa13.93□□□□□ -0.18
VPS11-205ENST00000534551 SRP54P61011 504 aaKnown RBP13.93□□□□□ -0.18
VPS11-205ENST00000534551 CRADDP78560 199 aa13.93□□□□□ -0.18
VPS11-205ENST00000534551 PPARDQ03181 441 aa13.93□□□□□ -0.18
VPS11-205ENST00000534551 C2orf54Q08AI8 447 aa13.93□□□□□ -0.18
VPS11-205ENST00000534551 CHRNA6Q15825 494 aa13.93□□□□□ -0.18
VPS11-205ENST00000534551 ATP13A5Q4VNC0 1218 aa13.93□□□□□ -0.18
VPS11-205ENST00000534551 CERCAMQ5T4B2 595 aa13.93□□□□□ -0.18
VPS11-205ENST00000534551 EID2Q8N6I1 236 aa13.93□□□□□ -0.18
VPS11-205ENST00000534551 OR56A4Q8NGH8 313 aa13.93□□□□□ -0.18
VPS11-205ENST00000534551 ATL2Q8NHH9 583 aa13.93□□□□□ -0.18
VPS11-205ENST00000534551 CCL4L1Q8NHW4 92 aa13.93□□□□□ -0.18
VPS11-205ENST00000534551 NAT14Q8WUY8 206 aa13.93□□□□□ -0.18
VPS11-205ENST00000534551 CCDC97Q96F63 343 aaPredicted RBP13.93□□□□□ -0.18
VPS11-205ENST00000534551 COX14Q96I36 57 aa13.93□□□□□ -0.18
VPS11-205ENST00000534551 TRIM51Q9BSJ1 452 aa13.93□□□□□ -0.18
VPS11-205ENST00000534551 TRABDQ9H4I3 376 aa13.93□□□□□ -0.18
VPS11-205ENST00000534551 ARNT2Q9HBZ2 717 aa13.93□□□□□ -0.18
VPS11-205ENST00000534551 CYP4F12Q9HCS2 524 aa13.93□□□□□ -0.18
VPS11-205ENST00000534551 HACD3Q9P035 362 aa13.93□□□□□ -0.18
VPS11-205ENST00000534551 NFKBIL1Q9UBC1 381 aaPredicted RBP13.93□□□□□ -0.18
VPS11-205ENST00000534551 PCOLCE2Q9UKZ9 415 aa13.93□□□□□ -0.18
VPS11-205ENST00000534551 PRKAB1Q9Y478 270 aa13.93□□□□□ -0.18
VPS11-205ENST00000534551 PCDHGB2Q9Y5G2 931 aa13.93□□□□□ -0.18
VPS11-205ENST00000534551 PTPRBP23467 1997 aa13.92□□□□□ -0.18
VPS11-205ENST00000534551 TRIM38O00635 465 aa13.92□□□□□ -0.18
VPS11-205ENST00000534551 FLRT2O43155 660 aa13.92□□□□□ -0.18
VPS11-205ENST00000534551 CBFA2T3O75081 653 aa13.92□□□□□ -0.18
VPS11-205ENST00000534551 SUN1O94901 812 aa13.92□□□□□ -0.18
VPS11-205ENST00000534551 ECEL1O95672 775 aa13.92□□□□□ -0.18
VPS11-205ENST00000534551 CEACAM5P06731 702 aa13.92□□□□□ -0.18
VPS11-205ENST00000534551 PRSS56P0CW18 603 aa13.92□□□□□ -0.18
VPS11-205ENST00000534551 PTGIRP43119 386 aa13.92□□□□□ -0.18
VPS11-205ENST00000534551 GNPDA1P46926 289 aa13.92□□□□□ -0.18
VPS11-205ENST00000534551 HK3P52790 923 aa13.92□□□□□ -0.18
VPS11-205ENST00000534551 KCNJ11Q14654 390 aa13.92□□□□□ -0.18
VPS11-205ENST00000534551 TAF1AQ15573 450 aaPredicted RBP13.92□□□□□ -0.18
VPS11-205ENST00000534551 SMAD1Q15797 465 aaKnown RBP13.92□□□□□ -0.18
VPS11-205ENST00000534551 DEFB133Q30KQ1 61 aa13.92□□□□□ -0.18
VPS11-205ENST00000534551 DCP2Q8IU60 420 aaKnown RBP13.92□□□□□ -0.18
VPS11-205ENST00000534551 SFTPA2Q8IWL1 248 aa13.92□□□□□ -0.18
VPS11-205ENST00000534551 DNAAF3Q8N9W5 541 aa13.92□□□□□ -0.18
VPS11-205ENST00000534551 BAHD1Q8TBE0 780 aaPredicted RBP13.92□□□□□ -0.18
VPS11-205ENST00000534551 TRIM44Q96DX7 344 aaPredicted RBP13.92□□□□□ -0.18
VPS11-205ENST00000534551 HIC2Q96JB3 615 aa13.92□□□□□ -0.18
VPS11-205ENST00000534551 TMEM168Q9H0V1 697 aa13.92□□□□□ -0.18
VPS11-205ENST00000534551 CARS2Q9HA77 564 aaKnown RBP13.92□□□□□ -0.18
VPS11-205ENST00000534551 IL26Q9NPH9 171 aa13.92□□□□□ -0.18
VPS11-205ENST00000534551 CASS4Q9NQ75 786 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms