RNA–Protein interactions for RNA: ENST00000533811.1

PACS1-214, Transcript of phosphofurin acidic cluster sorting protein 1, humanhuman

TSL 3

Gene PACS1, Length 541 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACS1-214ENST00000533811 ADAM22Q9P0K1 906 aa9.19□□□□□ -0.94
PACS1-214ENST00000533811 PDP2Q9P2J9 529 aa9.19□□□□□ -0.94
PACS1-214ENST00000533811 CNOT8Q9UFF9 292 aaKnown RBP9.19□□□□□ -0.94
PACS1-214ENST00000533811 ZNHIT2Q9UHR6 403 aa9.19□□□□□ -0.94
PACS1-214ENST00000533811 LNPEPQ9UIQ6 1025 aa9.19□□□□□ -0.94
PACS1-214ENST00000533811 NOCTQ9UK39 431 aaKnown RBP9.19□□□□□ -0.94
PACS1-214ENST00000533811 PRKAB1Q9Y478 270 aa9.19□□□□□ -0.94
PACS1-214ENST00000533811 A0A0U1RQS6 177 aa9.18□□□□□ -0.94
PACS1-214ENST00000533811 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP9.18□□□□□ -0.94
PACS1-214ENST00000533811 KIAA0754O94854 1291 aa9.18□□□□□ -0.94
PACS1-214ENST00000533811 DESP17661 470 aa9.18□□□□□ -0.94
PACS1-214ENST00000533811 CHRNB2P17787 502 aa9.18□□□□□ -0.94
PACS1-214ENST00000533811 TNFAIP3P21580 790 aa9.18□□□□□ -0.94
PACS1-214ENST00000533811 LHCGRP22888 699 aa9.18□□□□□ -0.94
PACS1-214ENST00000533811 SEPHS1P49903 392 aa9.18□□□□□ -0.94
PACS1-214ENST00000533811 RENBPP51606 427 aa9.18□□□□□ -0.94
PACS1-214ENST00000533811 PGDP52209 483 aa9.18□□□□□ -0.94
PACS1-214ENST00000533811 GFERP55789 205 aa9.18□□□□□ -0.94
PACS1-214ENST00000533811 CHAF1BQ13112 559 aa9.18□□□□□ -0.94
PACS1-214ENST00000533811 MAP7Q14244 749 aa9.18□□□□□ -0.94
PACS1-214ENST00000533811 EIF2S3LQ2VIR3 472 aaKnown RBP9.18□□□□□ -0.94
PACS1-214ENST00000533811 NADK2Q4G0N4 442 aa9.18□□□□□ -0.94
PACS1-214ENST00000533811 PYCR3Q53H96 274 aa9.18□□□□□ -0.94
PACS1-214ENST00000533811 MIIPQ5JXC2 388 aa9.18□□□□□ -0.94
PACS1-214ENST00000533811 CHCHD2P9Q5T1J5 151 aaPredicted RBP9.18□□□□□ -0.94
PACS1-214ENST00000533811 RFLNAQ6ZTI6 216 aa9.18□□□□□ -0.94
PACS1-214ENST00000533811 SFRP1Q8N474 314 aa9.18□□□□□ -0.94
PACS1-214ENST00000533811 SH3KBP1Q96B97 665 aa9.18□□□□□ -0.94
PACS1-214ENST00000533811 AP2M1Q96CW1 435 aa9.18□□□□□ -0.94
PACS1-214ENST00000533811 TUBGCP2Q9BSJ2 902 aa9.18□□□□□ -0.94
PACS1-214ENST00000533811 NAA15Q9BXJ9 866 aaKnown RBP9.18□□□□□ -0.94
PACS1-214ENST00000533811 STK33Q9BYT3 514 aa9.18□□□□□ -0.94
PACS1-214ENST00000533811 TRIM55Q9BYV6 548 aa9.18□□□□□ -0.94
PACS1-214ENST00000533811 VPS16Q9H269 839 aa9.18□□□□□ -0.94
PACS1-214ENST00000533811 DHX35Q9H5Z1 703 aaKnown RBP9.18□□□□□ -0.94
PACS1-214ENST00000533811 SARS2Q9NP81 518 aaKnown RBP9.18□□□□□ -0.94
PACS1-214ENST00000533811 LUZP4Q9P127 313 aa9.18□□□□□ -0.94
PACS1-214ENST00000533811 KIAA1468Q9P260 1216 aa9.18□□□□□ -0.94
PACS1-214ENST00000533811 PHTF1Q9UMS5 762 aa9.18□□□□□ -0.94
PACS1-214ENST00000533811 AP4E1Q9UPM8 1137 aa9.18□□□□□ -0.94
PACS1-214ENST00000533811 KCNK6Q9Y257 313 aa9.18□□□□□ -0.94
PACS1-214ENST00000533811 ITPR2Q14571 2701 aa9.18□□□□□ -0.94
PACS1-214ENST00000533811 NPIPB15A6NHN6 443 aaPredicted RBP9.17□□□□□ -0.94
PACS1-214ENST00000533811 SIGLEC16A6NMB1 481 aa9.17□□□□□ -0.94
PACS1-214ENST00000533811 GADD45BO75293 160 aaPredicted RBP9.17□□□□□ -0.94
PACS1-214ENST00000533811 CREG1O75629 220 aa9.17□□□□□ -0.94
PACS1-214ENST00000533811 RASSF9O75901 435 aa9.17□□□□□ -0.94
PACS1-214ENST00000533811 NDUFA10O95299 355 aa9.17□□□□□ -0.94
PACS1-214ENST00000533811 CALB1P05937 261 aa9.17□□□□□ -0.94
PACS1-214ENST00000533811 ACP5P13686 325 aa9.17□□□□□ -0.94
PACS1-214ENST00000533811 TYRP1P17643 537 aa9.17□□□□□ -0.94
PACS1-214ENST00000533811 DCTP40126 519 aa9.17□□□□□ -0.94
PACS1-214ENST00000533811 ZNF143P52747 638 aaPredicted RBP9.17□□□□□ -0.94
PACS1-214ENST00000533811 SH3BP2P78314 561 aa9.17□□□□□ -0.94
PACS1-214ENST00000533811 IL10RBQ08334 325 aa9.17□□□□□ -0.94
PACS1-214ENST00000533811 NSUN2Q08J23 767 aaKnown RBP eCLIP9.17□□□□□ -0.94
PACS1-214ENST00000533811 TRAF2Q12933 501 aa9.17□□□□□ -0.94
PACS1-214ENST00000533811 PTP4A2Q12974 167 aa9.17□□□□□ -0.94
PACS1-214ENST00000533811 MRPL49Q13405 166 aaKnown RBP9.17□□□□□ -0.94
PACS1-214ENST00000533811 DNASE1L3Q13609 305 aa9.17□□□□□ -0.94
PACS1-214ENST00000533811 RFTN1Q14699 578 aaPredicted RBP9.17□□□□□ -0.94
PACS1-214ENST00000533811 LBRQ14739 615 aaKnown RBP9.17□□□□□ -0.94
PACS1-214ENST00000533811 SYCP1Q15431 976 aa9.17□□□□□ -0.94
PACS1-214ENST00000533811 CAMK4Q16566 473 aa9.17□□□□□ -0.94
PACS1-214ENST00000533811 CA9Q16790 459 aa9.17□□□□□ -0.94
PACS1-214ENST00000533811 PRR30Q53SZ7 412 aaPredicted RBP9.17□□□□□ -0.94
PACS1-214ENST00000533811 TMCO4Q5TGY1 634 aa9.17□□□□□ -0.94
PACS1-214ENST00000533811 CPZQ66K79 652 aa9.17□□□□□ -0.94
PACS1-214ENST00000533811 DCUN1D2Q6PH85 259 aa9.17□□□□□ -0.94
PACS1-214ENST00000533811 TRIM72Q6ZMU5 477 aa9.17□□□□□ -0.94
PACS1-214ENST00000533811 USP45Q70EL2 814 aa9.17□□□□□ -0.94
PACS1-214ENST00000533811 CHST15Q7LFX5 561 aaPredicted RBP9.17□□□□□ -0.94
PACS1-214ENST00000533811 MAMDC2Q7Z304 686 aaPredicted RBP9.17□□□□□ -0.94
PACS1-214ENST00000533811 SLC9B2Q86UD5 537 aa9.17□□□□□ -0.94
PACS1-214ENST00000533811 PLXDC1Q8IUK5 500 aa9.17□□□□□ -0.94
PACS1-214ENST00000533811 ARHGAP12Q8IWW6 846 aa9.17□□□□□ -0.94
PACS1-214ENST00000533811 SRRM1Q8IYB3 904 aaKnown RBP9.17□□□□□ -0.94
PACS1-214ENST00000533811 LZTR1Q8N653 840 aa9.17□□□□□ -0.94
PACS1-214ENST00000533811 C3orf20Q8ND61 904 aa9.17□□□□□ -0.94
PACS1-214ENST00000533811 PRR7Q8TB68 274 aa9.17□□□□□ -0.94
PACS1-214ENST00000533811 SCAMP4Q969E2 229 aa9.17□□□□□ -0.94
PACS1-214ENST00000533811 TGM7Q96PF1 710 aa9.17□□□□□ -0.94
PACS1-214ENST00000533811 OR6C1Q96RD1 312 aa9.17□□□□□ -0.94
PACS1-214ENST00000533811 PCDHB18PQ96TA0 734 aa9.17□□□□□ -0.94
PACS1-214ENST00000533811 SLC25A23Q9BV35 468 aa9.17□□□□□ -0.94
PACS1-214ENST00000533811 ABCG8Q9H221 673 aa9.17□□□□□ -0.94
PACS1-214ENST00000533811 NLRC4Q9NPP4 1024 aa9.17□□□□□ -0.94
PACS1-214ENST00000533811 CUEDC1Q9NWM3 386 aaPredicted RBP9.17□□□□□ -0.94
PACS1-214ENST00000533811 SIDT1Q9NXL6 827 aaKnown RBP9.17□□□□□ -0.94
PACS1-214ENST00000533811 TBC1D29Q9UFV1 150 aa9.17□□□□□ -0.94
PACS1-214ENST00000533811 KCND3Q9UK17 655 aa9.17□□□□□ -0.94
PACS1-214ENST00000533811 A0A1W2PQ67 120 aa9.16□□□□□ -0.94
PACS1-214ENST00000533811 PSMD11O00231 422 aa9.16□□□□□ -0.94
PACS1-214ENST00000533811 HTRA2O43464 458 aaPredicted RBP9.16□□□□□ -0.94
PACS1-214ENST00000533811 SOCS5O75159 536 aa9.16□□□□□ -0.94
PACS1-214ENST00000533811 DDAH2O95865 285 aa9.16□□□□□ -0.94
PACS1-214ENST00000533811 ATP1A1P05023 1023 aaKnown RBP9.16□□□□□ -0.94
PACS1-214ENST00000533811 CCNYL3P0C7X3 344 aa9.16□□□□□ -0.94
PACS1-214ENST00000533811 SLC2A4P14672 509 aa9.16□□□□□ -0.94
PACS1-214ENST00000533811 ERCC2P18074 760 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms