RNA–Protein interactions for RNA: ENST00000533727.5

AMBRA1-211, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 1 (best) BASIC

Gene AMBRA1, Length 4,817 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-211ENST00000533727 EFCAB3Q8N7B9 438 aa11.24□□□□□ -0.61
AMBRA1-211ENST00000533727 SCAMP5Q8TAC9 235 aa11.24□□□□□ -0.61
AMBRA1-211ENST00000533727 B3GALT6Q96L58 329 aa11.24□□□□□ -0.61
AMBRA1-211ENST00000533727 P2RY13Q9BPV8 354 aa11.24□□□□□ -0.61
AMBRA1-211ENST00000533727 SPATA5L1Q9BVQ7 753 aa11.24□□□□□ -0.61
AMBRA1-211ENST00000533727 SAR1AQ9NR31 198 aa11.24□□□□□ -0.61
AMBRA1-211ENST00000533727 CORO2BQ9UQ03 480 aa11.24□□□□□ -0.61
AMBRA1-211ENST00000533727 ITGBL1O95965 494 aaPredicted RBP11.24□□□□□ -0.61
AMBRA1-211ENST00000533727 RHOP08100 348 aa11.24□□□□□ -0.61
AMBRA1-211ENST00000533727 ZNF30P17039 623 aa11.24□□□□□ -0.61
AMBRA1-211ENST00000533727 TFEBP19484 476 aa11.24□□□□□ -0.61
AMBRA1-211ENST00000533727 RAB33AQ14088 237 aa11.24□□□□□ -0.61
AMBRA1-211ENST00000533727 DPYSL2Q16555 572 aa11.24□□□□□ -0.61
AMBRA1-211ENST00000533727 ARMC4Q5T2S8 1044 aa11.24□□□□□ -0.61
AMBRA1-211ENST00000533727 UBE2R2Q712K3 238 aaPredicted RBP11.24□□□□□ -0.61
AMBRA1-211ENST00000533727 CYP4X1Q8N118 509 aa11.24□□□□□ -0.61
AMBRA1-211ENST00000533727 MIER2Q8N344 545 aa11.24□□□□□ -0.61
AMBRA1-211ENST00000533727 DCAF4L2Q8NA75 395 aa11.24□□□□□ -0.61
AMBRA1-211ENST00000533727 METTL21AQ8WXB1 218 aa11.24□□□□□ -0.61
AMBRA1-211ENST00000533727 SMARCD2Q92925 531 aa11.24□□□□□ -0.61
AMBRA1-211ENST00000533727 SLC22A18Q96BI1 424 aa11.24□□□□□ -0.61
AMBRA1-211ENST00000533727 MAGED4Q96JG8 741 aa11.24□□□□□ -0.61
AMBRA1-211ENST00000533727 SUV39H2Q9H5I1 410 aa11.24□□□□□ -0.61
AMBRA1-211ENST00000533727 ALG9Q9H6U8 611 aa11.24□□□□□ -0.61
AMBRA1-211ENST00000533727 GDF3Q9NR23 364 aa11.24□□□□□ -0.61
AMBRA1-211ENST00000533727 EIF2B3Q9NR50 452 aaKnown RBP11.24□□□□□ -0.61
AMBRA1-211ENST00000533727 IMPAD1Q9NX62 359 aa11.24□□□□□ -0.61
AMBRA1-211ENST00000533727 KLQ9UEF7 1012 aa11.24□□□□□ -0.61
AMBRA1-211ENST00000533727 MYRFQ9Y2G1 1151 aa11.24□□□□□ -0.61
AMBRA1-211ENST00000533727 WNT9AO14904 365 aa11.23□□□□□ -0.61
AMBRA1-211ENST00000533727 ULK1O75385 1050 aa11.23□□□□□ -0.61
AMBRA1-211ENST00000533727 FCGR1AP12314 374 aa11.23□□□□□ -0.61
AMBRA1-211ENST00000533727 VARSP26640 1264 aaKnown RBP11.23□□□□□ -0.61
AMBRA1-211ENST00000533727 SERPINB5P36952 375 aa11.23□□□□□ -0.61
AMBRA1-211ENST00000533727 DUSP3P51452 185 aaPredicted RBP11.23□□□□□ -0.61
AMBRA1-211ENST00000533727 RPL26P61254 145 aaKnown RBP11.23□□□□□ -0.61
AMBRA1-211ENST00000533727 FAAP100Q0VG06 881 aa11.23□□□□□ -0.61
AMBRA1-211ENST00000533727 TAF1AQ15573 450 aaPredicted RBP11.23□□□□□ -0.61
AMBRA1-211ENST00000533727 SLC35G1Q2M3R5 365 aa11.23□□□□□ -0.61
AMBRA1-211ENST00000533727 IL27RAQ6UWB1 636 aa11.23□□□□□ -0.61
AMBRA1-211ENST00000533727 LINGO4Q6UY18 593 aa11.23□□□□□ -0.61
AMBRA1-211ENST00000533727 CREG2Q8IUH2 290 aa11.23□□□□□ -0.61
AMBRA1-211ENST00000533727 PTGR2Q8N8N7 351 aaPredicted RBP11.23□□□□□ -0.61
AMBRA1-211ENST00000533727 PRELID2Q8N945 189 aa11.23□□□□□ -0.61
AMBRA1-211ENST00000533727 DIS3LQ8TF46 1054 aaKnown RBP11.23□□□□□ -0.61
AMBRA1-211ENST00000533727 PGM2Q96G03 612 aa11.23□□□□□ -0.61
AMBRA1-211ENST00000533727 ROGDIQ9GZN7 287 aa11.23□□□□□ -0.61
AMBRA1-211ENST00000533727 TUBA8Q9NY65 449 aaPredicted RBP11.23□□□□□ -0.61
AMBRA1-211ENST00000533727 RPL26L1Q9UNX3 145 aaKnown RBP11.23□□□□□ -0.61
AMBRA1-211ENST00000533727 ZNF232Q9UNY5 417 aa11.23□□□□□ -0.61
AMBRA1-211ENST00000533727 SNX8Q9Y5X2 465 aa11.23□□□□□ -0.61
AMBRA1-211ENST00000533727 TAF4O00268 1085 aa11.23□□□□□ -0.61
AMBRA1-211ENST00000533727 LEFTY2O00292 366 aa11.23□□□□□ -0.61
AMBRA1-211ENST00000533727 NR5A2O00482 541 aa11.23□□□□□ -0.61
AMBRA1-211ENST00000533727 LAMTOR5O43504 91 aa11.23□□□□□ -0.61
AMBRA1-211ENST00000533727 LBPP18428 481 aa11.23□□□□□ -0.61
AMBRA1-211ENST00000533727 OGNP20774 298 aaKnown RBP11.23□□□□□ -0.61
AMBRA1-211ENST00000533727 IFNGR2P38484 337 aa11.23□□□□□ -0.61
AMBRA1-211ENST00000533727 XKR6Q5GH73 641 aa11.23□□□□□ -0.61
AMBRA1-211ENST00000533727 DEFB107AQ8IZN7 70 aa11.23□□□□□ -0.61
AMBRA1-211ENST00000533727 ZBTB2Q8N680 514 aa11.23□□□□□ -0.61
AMBRA1-211ENST00000533727 LINGO1Q96FE5 620 aa11.23□□□□□ -0.61
AMBRA1-211ENST00000533727 FAM84AQ96KN4 292 aa11.23□□□□□ -0.61
AMBRA1-211ENST00000533727 POLE3Q9NRF9 147 aa11.23□□□□□ -0.61
AMBRA1-211ENST00000533727 FCF1Q9Y324 198 aaKnown RBP11.23□□□□□ -0.61
AMBRA1-211ENST00000533727 FAM237BA0A1B0GVD1 139 aa11.23□□□□□ -0.61
AMBRA1-211ENST00000533727 SMIM31A0A1B0GVY4 71 aa11.23□□□□□ -0.61
AMBRA1-211ENST00000533727 FCHO1O14526 889 aa11.23□□□□□ -0.61
AMBRA1-211ENST00000533727 PIRTP0C851 137 aa11.23□□□□□ -0.61
AMBRA1-211ENST00000533727 KCNA5P22460 613 aa11.23□□□□□ -0.61
AMBRA1-211ENST00000533727 TNFRSF8P28908 595 aa11.23□□□□□ -0.61
AMBRA1-211ENST00000533727 COPZ1P61923 177 aa11.23□□□□□ -0.61
AMBRA1-211ENST00000533727 RING1Q06587 406 aa11.23□□□□□ -0.61
AMBRA1-211ENST00000533727 ZNF33AQ06730 810 aa11.23□□□□□ -0.61
AMBRA1-211ENST00000533727 C11orf74Q86VG3 221 aa11.23□□□□□ -0.61
AMBRA1-211ENST00000533727 OR8H2Q8N162 312 aa11.23□□□□□ -0.61
AMBRA1-211ENST00000533727 NUS1Q96E22 293 aa11.23□□□□□ -0.61
AMBRA1-211ENST00000533727 LRIG1Q96JA1 1093 aa11.23□□□□□ -0.61
AMBRA1-211ENST00000533727 GORASP1Q9BQQ3 440 aa11.23□□□□□ -0.61
AMBRA1-211ENST00000533727 MMADHCQ9H3L0 296 aaPredicted RBP11.23□□□□□ -0.61
AMBRA1-211ENST00000533727 DPEP2Q9H4A9 486 aa11.23□□□□□ -0.61
AMBRA1-211ENST00000533727 WDR26Q9H7D7 661 aa11.23□□□□□ -0.61
AMBRA1-211ENST00000533727 MYADML2A6NDP7 307 aa11.23□□□□□ -0.61
AMBRA1-211ENST00000533727 C9IYK1 514 aa11.23□□□□□ -0.61
AMBRA1-211ENST00000533727 SLC31A1O15431 190 aa11.23□□□□□ -0.61
AMBRA1-211ENST00000533727 PHGDHO43175 533 aaKnown RBP11.23□□□□□ -0.61
AMBRA1-211ENST00000533727 TSC22D2O75157 780 aa11.23□□□□□ -0.61
AMBRA1-211ENST00000533727 CDH3P22223 829 aa11.23□□□□□ -0.61
AMBRA1-211ENST00000533727 CDKN2BP42772 138 aa11.23□□□□□ -0.61
AMBRA1-211ENST00000533727 PFKFB4Q16877 469 aa11.23□□□□□ -0.61
AMBRA1-211ENST00000533727 LSM12Q3MHD2 195 aaKnown RBP11.23□□□□□ -0.61
AMBRA1-211ENST00000533727 CDH24Q86UP0 819 aa11.23□□□□□ -0.61
AMBRA1-211ENST00000533727 OR2AP1Q8NGE2 309 aa11.23□□□□□ -0.61
AMBRA1-211ENST00000533727 HDAC7Q8WUI4 952 aa11.23□□□□□ -0.61
AMBRA1-211ENST00000533727 NDRG1Q92597 394 aaKnown RBP11.23□□□□□ -0.61
AMBRA1-211ENST00000533727 PTPN18Q99952 460 aa11.23□□□□□ -0.61
AMBRA1-211ENST00000533727 RHBGQ9H310 441 aa11.23□□□□□ -0.61
AMBRA1-211ENST00000533727 A0A087WXM4 84 aa11.22□□□□□ -0.61
AMBRA1-211ENST00000533727 TULP2O00295 520 aa11.22□□□□□ -0.61
AMBRA1-211ENST00000533727 IL12RB1P42701 662 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms