RNA–Protein interactions for RNA: ENST00000533455.5

CTSB-228, Transcript of cathepsin B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTSB, Length 2,009 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-228ENST00000533455 RPS9P46781 194 aaKnown RBP16.57■□□□□ 0.24
CTSB-228ENST00000533455 AFF1P51825 1210 aaKnown RBP16.57■□□□□ 0.24
CTSB-228ENST00000533455 EEFSECP57772 596 aaKnown RBP16.57■□□□□ 0.24
CTSB-228ENST00000533455 GRSF1Q12849 480 aaKnown RBP eCLIP16.57■□□□□ 0.24
CTSB-228ENST00000533455 IHHQ14623 411 aa16.57■□□□□ 0.24
CTSB-228ENST00000533455 CYP51A1Q16850 503 aa16.57■□□□□ 0.24
CTSB-228ENST00000533455 SIRPB2Q5JXA9 342 aa16.57■□□□□ 0.24
CTSB-228ENST00000533455 PNPT1Q8TCS8 783 aaKnown RBP16.57■□□□□ 0.24
CTSB-228ENST00000533455 PEX13Q92968 403 aa16.57■□□□□ 0.24
CTSB-228ENST00000533455 TUBGCP3Q96CW5 907 aa16.57■□□□□ 0.24
CTSB-228ENST00000533455 FAM105AQ9NUU6 356 aa16.57■□□□□ 0.24
CTSB-228ENST00000533455 ANAPC2Q9UJX6 822 aa16.57■□□□□ 0.24
CTSB-228ENST00000533455 SLC45A1Q9Y2W3 748 aa16.57■□□□□ 0.24
CTSB-228ENST00000533455 OR51F1A6NGY5 319 aa16.56■□□□□ 0.24
CTSB-228ENST00000533455 LRRC14BA6NHZ5 514 aa16.56■□□□□ 0.24
CTSB-228ENST00000533455 PDHXO00330 501 aa16.56■□□□□ 0.24
CTSB-228ENST00000533455 CCL22O00626 93 aa16.56■□□□□ 0.24
CTSB-228ENST00000533455 INPP4BO15327 924 aa16.56■□□□□ 0.24
CTSB-228ENST00000533455 EEDO75530 441 aaKnown RBP16.56■□□□□ 0.24
CTSB-228ENST00000533455 ATXN1LP0C7T5 689 aaKnown RBP16.56■□□□□ 0.24
CTSB-228ENST00000533455 ZFP36L2P47974 494 aaKnown RBP16.56■□□□□ 0.24
CTSB-228ENST00000533455 HLCSP50747 726 aa16.56■□□□□ 0.24
CTSB-228ENST00000533455 ADARB1P78563 741 aaKnown RBP16.56■□□□□ 0.24
CTSB-228ENST00000533455 DSC2Q02487 901 aa16.56■□□□□ 0.24
CTSB-228ENST00000533455 NFYCQ13952 458 aa16.56■□□□□ 0.24
CTSB-228ENST00000533455 RCAN2Q14206 197 aa16.56■□□□□ 0.24
CTSB-228ENST00000533455 RPS6KA2Q15349 733 aa16.56■□□□□ 0.24
CTSB-228ENST00000533455 FXNQ16595 210 aa16.56■□□□□ 0.24
CTSB-228ENST00000533455 UPP1Q16831 310 aa16.56■□□□□ 0.24
CTSB-228ENST00000533455 GEN1Q17RS7 908 aa16.56■□□□□ 0.24
CTSB-228ENST00000533455 ZNF829Q3KNS6 432 aaPredicted RBP16.56■□□□□ 0.24
CTSB-228ENST00000533455 TEX26Q8N6G2 289 aa16.56■□□□□ 0.24
CTSB-228ENST00000533455 NPLOC4Q8TAT6 608 aa16.56■□□□□ 0.24
CTSB-228ENST00000533455 TBC1D15Q8TC07 691 aa16.56■□□□□ 0.24
CTSB-228ENST00000533455 C1orf74Q96LT6 269 aa16.56■□□□□ 0.24
CTSB-228ENST00000533455 NSUN5Q96P11 429 aaKnown RBP16.56■□□□□ 0.24
CTSB-228ENST00000533455 KCNA7Q96RP8 456 aa16.56■□□□□ 0.24
CTSB-228ENST00000533455 POLR1BQ9H9Y6 1135 aa16.56■□□□□ 0.24
CTSB-228ENST00000533455 TBC1D23Q9NUY8 699 aa16.56■□□□□ 0.24
CTSB-228ENST00000533455 CRYL1Q9Y2S2 319 aa16.56■□□□□ 0.24
CTSB-228ENST00000533455 ASPDHA6ND91 283 aa16.55■□□□□ 0.24
CTSB-228ENST00000533455 C9JVG2 144 aa16.55■□□□□ 0.24
CTSB-228ENST00000533455 CPNE6O95741 557 aa16.55■□□□□ 0.24
CTSB-228ENST00000533455 SLC4A1P02730 911 aa16.55■□□□□ 0.24
CTSB-228ENST00000533455 INHBBP09529 407 aa16.55■□□□□ 0.24
CTSB-228ENST00000533455 MTHFD1P11586 935 aaKnown RBP16.55■□□□□ 0.24
CTSB-228ENST00000533455 SLC5A3P53794 718 aa16.55■□□□□ 0.24
CTSB-228ENST00000533455 MLLT6P55198 1093 aaPredicted RBP16.55■□□□□ 0.24
CTSB-228ENST00000533455 MAXP61244 160 aa16.55■□□□□ 0.24
CTSB-228ENST00000533455 SLC10A7Q0GE19 358 aa16.55■□□□□ 0.24
CTSB-228ENST00000533455 LCP2Q13094 533 aa16.55■□□□□ 0.24
CTSB-228ENST00000533455 AARS2Q5JTZ9 985 aaKnown RBP16.55■□□□□ 0.24
CTSB-228ENST00000533455 CCNYL2Q5T2Q4 361 aa16.55■□□□□ 0.24
CTSB-228ENST00000533455 MARC1Q5VT66 337 aa16.55■□□□□ 0.24
CTSB-228ENST00000533455 GPR107Q5VW38 600 aa16.55■□□□□ 0.24
CTSB-228ENST00000533455 SCD5Q86SK9 330 aa16.55■□□□□ 0.24
CTSB-228ENST00000533455 TRIM74Q86UV6 250 aa16.55■□□□□ 0.24
CTSB-228ENST00000533455 TRIM73Q86UV7 250 aa16.55■□□□□ 0.24
CTSB-228ENST00000533455 METTL23Q86XA0 190 aa16.55■□□□□ 0.24
CTSB-228ENST00000533455 LEMD2Q8NC56 503 aa16.55■□□□□ 0.24
CTSB-228ENST00000533455 OSCP1Q8WVF1 389 aa16.55■□□□□ 0.24
CTSB-228ENST00000533455 THAP11Q96EK4 314 aa16.55■□□□□ 0.24
CTSB-228ENST00000533455 VPS50Q96JG6 964 aa16.55■□□□□ 0.24
CTSB-228ENST00000533455 KCTD14Q9BQ13 255 aaPredicted RBP16.55■□□□□ 0.24
CTSB-228ENST00000533455 AIG1Q9NVV5 245 aa16.55■□□□□ 0.24
CTSB-228ENST00000533455 MRPL42Q9Y6G3 142 aaKnown RBP16.55■□□□□ 0.24
CTSB-228ENST00000533455 LOC285095A0A1B0GVY8 99 aa16.55■□□□□ 0.24
CTSB-228ENST00000533455 C17orf102A2RUQ5 167 aa16.55■□□□□ 0.24
CTSB-228ENST00000533455 CASTOR2A6NHX0 329 aa16.55■□□□□ 0.24
CTSB-228ENST00000533455 H0YAE9 185 aa16.55■□□□□ 0.24
CTSB-228ENST00000533455 CBFA2T3O75081 653 aa16.55■□□□□ 0.24
CTSB-228ENST00000533455 CLIC3O95833 236 aa16.55■□□□□ 0.24
CTSB-228ENST00000533455 LINC00032P0C843 101 aa16.55■□□□□ 0.24
CTSB-228ENST00000533455 HOXC8P31273 242 aa16.55■□□□□ 0.24
CTSB-228ENST00000533455 KCNK10P57789 538 aa16.55■□□□□ 0.24
CTSB-228ENST00000533455 LIPEQ05469 1076 aa16.55■□□□□ 0.24
CTSB-228ENST00000533455 ITKQ08881 620 aa16.55■□□□□ 0.24
CTSB-228ENST00000533455 PFKFB4Q16877 469 aa16.55■□□□□ 0.24
CTSB-228ENST00000533455 AASDHQ4L235 1098 aaPredicted RBP16.55■□□□□ 0.24
CTSB-228ENST00000533455 PIK3R6Q5UE93 754 aa16.55■□□□□ 0.24
CTSB-228ENST00000533455 KCTD8Q6ZWB6 473 aa16.55■□□□□ 0.24
CTSB-228ENST00000533455 TLK2Q86UE8 772 aa16.55■□□□□ 0.24
CTSB-228ENST00000533455 ZNF683Q8IZ20 524 aa16.55■□□□□ 0.24
CTSB-228ENST00000533455 OFCC1Q8IZS5 231 aa16.55■□□□□ 0.24
CTSB-228ENST00000533455 SNRNP27Q8WVK2 155 aaKnown RBP16.55■□□□□ 0.24
CTSB-228ENST00000533455 HMCESQ96FZ2 354 aa16.55■□□□□ 0.24
CTSB-228ENST00000533455 SLC30A3Q99726 388 aa16.55■□□□□ 0.24
CTSB-228ENST00000533455 PAAF1Q9BRP4 392 aa16.55■□□□□ 0.24
CTSB-228ENST00000533455 NUSAP1Q9BXS6 441 aaKnown RBP16.55■□□□□ 0.24
CTSB-228ENST00000533455 PRDM5Q9NQX1 630 aaPredicted RBP16.55■□□□□ 0.24
CTSB-228ENST00000533455 PKD2L2Q9NZM6 624 aa16.55■□□□□ 0.24
CTSB-228ENST00000533455 BTRCQ9Y297 605 aa16.55■□□□□ 0.24
CTSB-228ENST00000533455 KCTD3Q9Y597 815 aa16.55■□□□□ 0.24
CTSB-228ENST00000533455 A0A1W2PPW3 197 aa16.54■□□□□ 0.24
CTSB-228ENST00000533455 ARL5CA6NH57 179 aa16.54■□□□□ 0.24
CTSB-228ENST00000533455 H3BMM5 538 aa16.54■□□□□ 0.24
CTSB-228ENST00000533455 TMX2-CTNND1H3BSU7 103 aa16.54■□□□□ 0.24
CTSB-228ENST00000533455 J3KR12 359 aa16.54■□□□□ 0.24
CTSB-228ENST00000533455 TNFRSF10BO14763 440 aa16.54■□□□□ 0.24
CTSB-228ENST00000533455 KERAO60938 352 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms