RNA–Protein interactions for RNA: ENST00000533018.1

PCF11-206, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 3

Gene PCF11, Length 580 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-206ENST00000533018 PYGLP06737 847 aa17.72■□□□□ 0.43
PCF11-206ENST00000533018 TAS2R40P59535 323 aa17.72■□□□□ 0.43
PCF11-206ENST00000533018 GBE1Q04446 702 aa17.72■□□□□ 0.43
PCF11-206ENST00000533018 C16orf72Q14CZ0 275 aa17.72■□□□□ 0.43
PCF11-206ENST00000533018 MANEAQ5SRI9 462 aa17.72■□□□□ 0.43
PCF11-206ENST00000533018 NKAIN2Q5VXU1 208 aa17.72■□□□□ 0.43
PCF11-206ENST00000533018 C17orf82Q86X59 251 aaPredicted RBP17.72■□□□□ 0.43
PCF11-206ENST00000533018 ZFAND4Q86XD8 727 aa17.72■□□□□ 0.43
PCF11-206ENST00000533018 GALNT13Q8IUC8 556 aa17.72■□□□□ 0.43
PCF11-206ENST00000533018 NAGSQ8N159 534 aa17.72■□□□□ 0.43
PCF11-206ENST00000533018 ZNF830Q96NB3 372 aaPredicted RBP17.72■□□□□ 0.43
PCF11-206ENST00000533018 AGAP2Q99490 1192 aa17.72■□□□□ 0.43
PCF11-206ENST00000533018 SEMA4CQ9C0C4 833 aa17.72■□□□□ 0.43
PCF11-206ENST00000533018 PCDH9Q9HC56 1237 aa17.72■□□□□ 0.43
PCF11-206ENST00000533018 FOXJ2Q9P0K8 574 aa17.72■□□□□ 0.43
PCF11-206ENST00000533018 AMACRQ9UHK6 382 aa17.72■□□□□ 0.43
PCF11-206ENST00000533018 ZNHIT2Q9UHR6 403 aa17.72■□□□□ 0.43
PCF11-206ENST00000533018 ST14Q9Y5Y6 855 aa17.72■□□□□ 0.43
PCF11-206ENST00000533018 C1orf232A0A0U1RR37 186 aa17.71■□□□□ 0.43
PCF11-206ENST00000533018 PPM1DO15297 605 aa17.71■□□□□ 0.43
PCF11-206ENST00000533018 EFSO43281 561 aa17.71■□□□□ 0.43
PCF11-206ENST00000533018 HLA-DQB2P05538 268 aa17.71■□□□□ 0.43
PCF11-206ENST00000533018 PLA2G2AP14555 144 aa17.71■□□□□ 0.43
PCF11-206ENST00000533018 CD1CP29017 333 aa17.71■□□□□ 0.43
PCF11-206ENST00000533018 GPR3P46089 330 aa17.71■□□□□ 0.43
PCF11-206ENST00000533018 STC1P52823 247 aa17.71■□□□□ 0.43
PCF11-206ENST00000533018 SRSF6Q13247 344 aaKnown RBP17.71■□□□□ 0.43
PCF11-206ENST00000533018 MESDQ14696 234 aa17.71■□□□□ 0.43
PCF11-206ENST00000533018 SLC18A3Q16572 532 aa17.71■□□□□ 0.43
PCF11-206ENST00000533018 PYCR3Q53H96 274 aa17.71■□□□□ 0.43
PCF11-206ENST00000533018 ZNF765Q7L2R6 523 aa17.71■□□□□ 0.43
PCF11-206ENST00000533018 ZNF438Q7Z4V0 828 aa17.71■□□□□ 0.43
PCF11-206ENST00000533018 CCDC13Q8IYE1 715 aa17.71■□□□□ 0.43
PCF11-206ENST00000533018 NRSN1Q8IZ57 195 aa17.71■□□□□ 0.43
PCF11-206ENST00000533018 TSGA13Q96PP4 275 aa17.71■□□□□ 0.43
PCF11-206ENST00000533018 PACSIN1Q9BY11 444 aa17.71■□□□□ 0.43
PCF11-206ENST00000533018 XPO4Q9C0E2 1151 aaKnown RBP17.71■□□□□ 0.43
PCF11-206ENST00000533018 KCNK4Q9NYG8 393 aa17.71■□□□□ 0.43
PCF11-206ENST00000533018 LCMT1Q9UIC8 334 aa17.71■□□□□ 0.43
PCF11-206ENST00000533018 ACSL6Q9UKU0 697 aa17.71■□□□□ 0.43
PCF11-206ENST00000533018 C9orf172C9J069 976 aa17.7■□□□□ 0.42
PCF11-206ENST00000533018 JCHAINP01591 159 aa17.7■□□□□ 0.42
PCF11-206ENST00000533018 ATP1A1P05023 1023 aaKnown RBP17.7■□□□□ 0.42
PCF11-206ENST00000533018 CCL4P13236 92 aa17.7■□□□□ 0.42
PCF11-206ENST00000533018 MPSTP25325 297 aa17.7■□□□□ 0.42
PCF11-206ENST00000533018 CD86P42081 329 aa17.7■□□□□ 0.42
PCF11-206ENST00000533018 NIPAL4Q0D2K0 466 aa17.7■□□□□ 0.42
PCF11-206ENST00000533018 IHHQ14623 411 aa17.7■□□□□ 0.42
PCF11-206ENST00000533018 ALG1LQ6GMV1 187 aa17.7■□□□□ 0.42
PCF11-206ENST00000533018 ZNF574Q6ZN55 896 aaPredicted RBP17.7■□□□□ 0.42
PCF11-206ENST00000533018 CHST15Q7LFX5 561 aaPredicted RBP17.7■□□□□ 0.42
PCF11-206ENST00000533018 VASH2Q86V25 355 aa17.7■□□□□ 0.42
PCF11-206ENST00000533018 PQLC3Q8N755 202 aa17.7■□□□□ 0.42
PCF11-206ENST00000533018 ARRDC2Q8TBH0 407 aa17.7■□□□□ 0.42
PCF11-206ENST00000533018 CCHCR1Q8TD31 782 aa17.7■□□□□ 0.42
PCF11-206ENST00000533018 FATE1Q969F0 183 aa17.7■□□□□ 0.42
PCF11-206ENST00000533018 SGF29Q96ES7 293 aa17.7■□□□□ 0.42
PCF11-206ENST00000533018 AHCYL2Q96HN2 611 aaKnown RBP17.7■□□□□ 0.42
PCF11-206ENST00000533018 CCDC74BQ96LY2 380 aa17.7■□□□□ 0.42
PCF11-206ENST00000533018 ARHGAP9Q9BRR9 750 aa17.7■□□□□ 0.42
PCF11-206ENST00000533018 ZNHIT6Q9NWK9 470 aaKnown RBP17.7■□□□□ 0.42
PCF11-206ENST00000533018 PRKAB1Q9Y478 270 aa17.7■□□□□ 0.42
PCF11-206ENST00000533018 HEY1Q9Y5J3 304 aa17.7■□□□□ 0.42
PCF11-206ENST00000533018 BOD1L1Q8NFC6 3051 aa17.7■□□□□ 0.42
PCF11-206ENST00000533018 IGHV5-10-1A0A0J9YXX1 117 aa17.69■□□□□ 0.42
PCF11-206ENST00000533018 LRRD1A4D1F6 860 aa17.69■□□□□ 0.42
PCF11-206ENST00000533018 KCNK1O00180 336 aa17.69■□□□□ 0.42
PCF11-206ENST00000533018 HGSO14964 777 aaPredicted RBP17.69■□□□□ 0.42
PCF11-206ENST00000533018 AKR1B10O60218 316 aa17.69■□□□□ 0.42
PCF11-206ENST00000533018 PRLP01236 227 aa17.69■□□□□ 0.42
PCF11-206ENST00000533018 KDELR1P24390 212 aa17.69■□□□□ 0.42
PCF11-206ENST00000533018 RPL26P61254 145 aaKnown RBP17.69■□□□□ 0.42
PCF11-206ENST00000533018 SLC10A2Q12908 348 aaPredicted RBP17.69■□□□□ 0.42
PCF11-206ENST00000533018 LRP8Q14114 963 aa17.69■□□□□ 0.42
PCF11-206ENST00000533018 NR1D2Q14995 579 aa17.69■□□□□ 0.42
PCF11-206ENST00000533018 CLPPQ16740 277 aaPredicted RBP17.69■□□□□ 0.42
PCF11-206ENST00000533018 ODF2Q5BJF6 829 aa17.69■□□□□ 0.42
PCF11-206ENST00000533018 NLRP8Q86W28 1048 aa17.69■□□□□ 0.42
PCF11-206ENST00000533018 ZNF761Q86XN6 746 aaPredicted RBP17.69■□□□□ 0.42
PCF11-206ENST00000533018 ZSCAN1Q8NBB4 408 aa17.69■□□□□ 0.42
PCF11-206ENST00000533018 TRAF3IP1Q8TDR0 691 aaPredicted RBP17.69■□□□□ 0.42
PCF11-206ENST00000533018 JPH3Q8WXH2 748 aaPredicted RBP17.69■□□□□ 0.42
PCF11-206ENST00000533018 RAPGEF5Q92565 580 aa17.69■□□□□ 0.42
PCF11-206ENST00000533018 FAF2Q96CS3 445 aa17.69■□□□□ 0.42
PCF11-206ENST00000533018 HDAC11Q96DB2 347 aa17.69■□□□□ 0.42
PCF11-206ENST00000533018 MED8Q96G25 268 aa17.69■□□□□ 0.42
PCF11-206ENST00000533018 SCARF2Q96GP6 870 aaPredicted RBP17.69■□□□□ 0.42
PCF11-206ENST00000533018 SLC38A3Q99624 504 aa17.69■□□□□ 0.42
PCF11-206ENST00000533018 MLPHQ9BV36 600 aaPredicted RBP17.69■□□□□ 0.42
PCF11-206ENST00000533018 MAK16Q9BXY0 300 aaKnown RBP17.69■□□□□ 0.42
PCF11-206ENST00000533018 ADGRE3Q9BY15 652 aa17.69■□□□□ 0.42
PCF11-206ENST00000533018 FAM83DQ9H4H8 585 aa17.69■□□□□ 0.42
PCF11-206ENST00000533018 DTLQ9NZJ0 730 aa17.69■□□□□ 0.42
PCF11-206ENST00000533018 PKD2L2Q9NZM6 624 aa17.69■□□□□ 0.42
PCF11-206ENST00000533018 RPL26L1Q9UNX3 145 aaKnown RBP17.69■□□□□ 0.42
PCF11-206ENST00000533018 SETXQ7Z333 2677 aaKnown RBP17.69■□□□□ 0.42
PCF11-206ENST00000533018 TENM4Q6N022 2769 aa17.68■□□□□ 0.42
PCF11-206ENST00000533018 IGHV1OR21-1A0A087WYE8 117 aa17.68■□□□□ 0.42
PCF11-206ENST00000533018 CSTF2P33240 577 aaKnown RBP eCLIP17.68■□□□□ 0.428e-8■■■■■ 29.1
PCF11-206ENST00000533018 LIMK2P53671 638 aa17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms