RNA–Protein interactions for RNA: ENST00000532935.5

CPSF1-210, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 506 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-210ENST00000532935 JUPP14923 745 aa15.29■□□□□ 0.04
CPSF1-210ENST00000532935 TNNT3P45378 269 aaPredicted RBP15.29■□□□□ 0.04
CPSF1-210ENST00000532935 POLD2P49005 469 aa15.29■□□□□ 0.04
CPSF1-210ENST00000532935 RPIAP49247 311 aa15.29■□□□□ 0.04
CPSF1-210ENST00000532935 KLF1Q13351 362 aaPredicted RBP15.29■□□□□ 0.04
CPSF1-210ENST00000532935 MPP3Q13368 585 aa15.29■□□□□ 0.04
CPSF1-210ENST00000532935 SIRPB2Q5JXA9 342 aa15.29■□□□□ 0.04
CPSF1-210ENST00000532935 HENMT1Q5T8I9 393 aaKnown RBP15.29■□□□□ 0.04
CPSF1-210ENST00000532935 ITPRIPL1Q6GPH6 555 aa15.29■□□□□ 0.04
CPSF1-210ENST00000532935 GUSBP11Q6P575 273 aa15.29■□□□□ 0.04
CPSF1-210ENST00000532935 DOK6Q6PKX4 331 aa15.29■□□□□ 0.04
CPSF1-210ENST00000532935 ZNF662Q6ZS27 426 aa15.29■□□□□ 0.04
CPSF1-210ENST00000532935 EFL1Q7Z2Z2 1120 aaKnown RBP15.29■□□□□ 0.04
CPSF1-210ENST00000532935 TMC3Q7Z5M5 1100 aa15.29■□□□□ 0.04
CPSF1-210ENST00000532935 TAF8Q7Z7C8 310 aa15.29■□□□□ 0.04
CPSF1-210ENST00000532935 TTC13Q8NBP0 860 aa15.29■□□□□ 0.04
CPSF1-210ENST00000532935 UBE2Q2Q8WVN8 375 aa15.29■□□□□ 0.04
CPSF1-210ENST00000532935 COX14Q96I36 57 aa15.29■□□□□ 0.04
CPSF1-210ENST00000532935 HIC2Q96JB3 615 aa15.29■□□□□ 0.04
CPSF1-210ENST00000532935 GPR63Q9BZJ6 419 aa15.29■□□□□ 0.04
CPSF1-210ENST00000532935 GBA3Q9H227 469 aa15.29■□□□□ 0.04
CPSF1-210ENST00000532935 SUDS3Q9H7L9 328 aaPredicted RBP15.29■□□□□ 0.04
CPSF1-210ENST00000532935 SUFUQ9UMX1 484 aa15.29■□□□□ 0.04
CPSF1-210ENST00000532935 GPR34Q9UPC5 381 aa15.29■□□□□ 0.04
CPSF1-210ENST00000532935 SPO11Q9Y5K1 396 aa15.29■□□□□ 0.04
CPSF1-210ENST00000532935 ZNF106Q9H2Y7 1883 aaKnown RBP15.29■□□□□ 0.04
CPSF1-210ENST00000532935 ZZEF1O43149 2961 aa15.28■□□□□ 0.04
CPSF1-210ENST00000532935 TMEM8BA6NDV4 472 aa15.28■□□□□ 0.04
CPSF1-210ENST00000532935 INPP4BO15327 924 aa15.28■□□□□ 0.04
CPSF1-210ENST00000532935 NRDCO43847 1150 aa15.28■□□□□ 0.04
CPSF1-210ENST00000532935 STK10O94804 968 aaKnown RBP15.28■□□□□ 0.04
CPSF1-210ENST00000532935 IVLP07476 585 aa15.28■□□□□ 0.04
CPSF1-210ENST00000532935 GNPDA1P46926 289 aa15.28■□□□□ 0.04
CPSF1-210ENST00000532935 ANKRD20A2Q5SQ80 823 aa15.28■□□□□ 0.04
CPSF1-210ENST00000532935 ANKRD20A1Q5TYW2 823 aa15.28■□□□□ 0.04
CPSF1-210ENST00000532935 ANKRD20A3Q5VUR7 823 aa15.28■□□□□ 0.04
CPSF1-210ENST00000532935 TRIM74Q86UV6 250 aa15.28■□□□□ 0.04
CPSF1-210ENST00000532935 ARL10Q8N8L6 244 aa15.28■□□□□ 0.04
CPSF1-210ENST00000532935 KYQ8NBH2 561 aa15.28■□□□□ 0.04
CPSF1-210ENST00000532935 IPMKQ8NFU5 416 aa15.28■□□□□ 0.04
CPSF1-210ENST00000532935 CCL4L1Q8NHW4 92 aa15.28■□□□□ 0.04
CPSF1-210ENST00000532935 PTCD2Q8WV60 388 aaKnown RBP15.28■□□□□ 0.04
CPSF1-210ENST00000532935 GORASP1Q9BQQ3 440 aa15.28■□□□□ 0.04
CPSF1-210ENST00000532935 LZTFL1Q9NQ48 299 aa15.28■□□□□ 0.04
CPSF1-210ENST00000532935 SIRPGQ9P1W8 387 aa15.28■□□□□ 0.04
CPSF1-210ENST00000532935 GULP1Q9UBP9 304 aa15.28■□□□□ 0.04
CPSF1-210ENST00000532935 CNOT6Q9ULM6 557 aaKnown RBP15.28■□□□□ 0.04
CPSF1-210ENST00000532935 TMEM98Q9Y2Y6 226 aa15.28■□□□□ 0.04
CPSF1-210ENST00000532935 TCRBV7S2A1N4TA0A589 114 aa15.27■□□□□ 0.04
CPSF1-210ENST00000532935 FADS2P1A8MWK0 482 aa15.27■□□□□ 0.04
CPSF1-210ENST00000532935 AURKAO14965 403 aa15.27■□□□□ 0.04
CPSF1-210ENST00000532935 OPA1O60313 960 aa15.27■□□□□ 0.04
CPSF1-210ENST00000532935 ZNF189O75820 626 aaPredicted RBP15.27■□□□□ 0.04
CPSF1-210ENST00000532935 ANXA9O76027 345 aa15.27■□□□□ 0.04
CPSF1-210ENST00000532935 HLA-DPA1P20036 260 aa15.27■□□□□ 0.04
CPSF1-210ENST00000532935 CHRNA4P43681 627 aa15.27■□□□□ 0.04
CPSF1-210ENST00000532935 GEMP55040 296 aa15.27■□□□□ 0.04
CPSF1-210ENST00000532935 DCDC1P59894 354 aa15.27■□□□□ 0.04
CPSF1-210ENST00000532935 TARDBPQ13148 414 aaKnown RBP eCLIP15.27■□□□□ 0.04
CPSF1-210ENST00000532935 CAMK2BQ13554 666 aa15.27■□□□□ 0.04
CPSF1-210ENST00000532935 SLC1A5Q15758 541 aa15.27■□□□□ 0.04
CPSF1-210ENST00000532935 ST3GAL2Q16842 350 aa15.27■□□□□ 0.04
CPSF1-210ENST00000532935 ALS2CLQ60I27 953 aa15.27■□□□□ 0.04
CPSF1-210ENST00000532935 CACTIN-AS1Q8N1I8 211 aa15.27■□□□□ 0.04
CPSF1-210ENST00000532935 SLC25A41Q8N5S1 370 aa15.27■□□□□ 0.04
CPSF1-210ENST00000532935 KDF1Q8NAX2 398 aaPredicted RBP15.27■□□□□ 0.04
CPSF1-210ENST00000532935 GPR26Q8NDV2 337 aa15.27■□□□□ 0.04
CPSF1-210ENST00000532935 FAM46DQ8NEK8 389 aa15.27■□□□□ 0.04
CPSF1-210ENST00000532935 CCDC110Q8TBZ0 833 aa15.27■□□□□ 0.04
CPSF1-210ENST00000532935 MAPK15Q8TD08 544 aa15.27■□□□□ 0.04
CPSF1-210ENST00000532935 GPBAR1Q8TDU6 330 aa15.27■□□□□ 0.04
CPSF1-210ENST00000532935 NAT6Q93015 286 aa15.27■□□□□ 0.04
CPSF1-210ENST00000532935 SCARF2Q96GP6 870 aaPredicted RBP15.27■□□□□ 0.04
CPSF1-210ENST00000532935 SPATA13Q96N96 652 aa15.27■□□□□ 0.04
CPSF1-210ENST00000532935 SPATA16Q9BXB7 569 aa15.27■□□□□ 0.04
CPSF1-210ENST00000532935 FSD1LQ9BXM9 530 aa15.27■□□□□ 0.04
CPSF1-210ENST00000532935 CDH19Q9H159 772 aa15.27■□□□□ 0.04
CPSF1-210ENST00000532935 TRABDQ9H4I3 376 aa15.27■□□□□ 0.04
CPSF1-210ENST00000532935 RAD18Q9NS91 495 aa15.27■□□□□ 0.04
CPSF1-210ENST00000532935 TRNAU1APQ9NX07 287 aaKnown RBP15.27■□□□□ 0.04
CPSF1-210ENST00000532935 NFKBIL1Q9UBC1 381 aaPredicted RBP15.27■□□□□ 0.04
CPSF1-210ENST00000532935 PADI4Q9UM07 663 aa15.27■□□□□ 0.04
CPSF1-210ENST00000532935 CLCA2Q9UQC9 943 aa15.27■□□□□ 0.04
CPSF1-210ENST00000532935 R3HDM2Q9Y2K5 976 aaKnown RBP15.27■□□□□ 0.04
CPSF1-210ENST00000532935 UNC13CQ8NB66 2214 aa15.27■□□□□ 0.03
CPSF1-210ENST00000532935 ANKRD11Q6UB99 2663 aaPredicted RBP15.26■□□□□ 0.03
CPSF1-210ENST00000532935 TRABD2BA6NFA1 517 aa15.26■□□□□ 0.03
CPSF1-210ENST00000532935 MT-CO3P00414 261 aa15.26■□□□□ 0.03
CPSF1-210ENST00000532935 FGF1P05230 155 aa15.26■□□□□ 0.03
CPSF1-210ENST00000532935 PSMB4P28070 264 aa15.26■□□□□ 0.03
CPSF1-210ENST00000532935 ADCY8P40145 1251 aa15.26■□□□□ 0.03
CPSF1-210ENST00000532935 ILF3Q12906 894 aaKnown RBP eCLIP15.26■□□□□ 0.03
CPSF1-210ENST00000532935 RPS6KA1Q15418 735 aa15.26■□□□□ 0.03
CPSF1-210ENST00000532935 PERM1Q5SV97 790 aa15.26■□□□□ 0.03
CPSF1-210ENST00000532935 SEL1L2Q5TEA6 688 aa15.26■□□□□ 0.03
CPSF1-210ENST00000532935 MEI1Q5TIA1 1274 aa15.26■□□□□ 0.03
CPSF1-210ENST00000532935 NRROSQ86YC3 692 aa15.26■□□□□ 0.03
CPSF1-210ENST00000532935 PDCD7Q8N8D1 485 aaKnown RBP15.26■□□□□ 0.03
CPSF1-210ENST00000532935 DCBLD1Q8N8Z6 715 aa15.26■□□□□ 0.03
CPSF1-210ENST00000532935 GPR156Q8NFN8 814 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms