RNA–Protein interactions for RNA: ENST00000532088.1

COPB1-208, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 3

Gene COPB1, Length 510 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-208ENST00000532088 SLC17A9Q9BYT1 436 aa12.47□□□□□ -0.41
COPB1-208ENST00000532088 IRF2BPLQ9H1B7 796 aa12.47□□□□□ -0.41
COPB1-208ENST00000532088 ATP13A2Q9NQ11 1180 aa12.47□□□□□ -0.41
COPB1-208ENST00000532088 PIH1D1Q9NWS0 290 aaKnown RBP12.47□□□□□ -0.41
COPB1-208ENST00000532088 APPL1Q9UKG1 709 aa12.47□□□□□ -0.41
COPB1-208ENST00000532088 ZBTB32Q9Y2Y4 487 aaPredicted RBP12.47□□□□□ -0.41
COPB1-208ENST00000532088 ARL5AQ9Y689 179 aa12.47□□□□□ -0.41
COPB1-208ENST00000532088 IGLON5A6NGN9 336 aa12.46□□□□□ -0.41
COPB1-208ENST00000532088 CTIFO43310 598 aaKnown RBP12.46□□□□□ -0.41
COPB1-208ENST00000532088 SPAG6O75602 509 aa12.46□□□□□ -0.41
COPB1-208ENST00000532088 RECQL5O94762 991 aaPredicted RBP12.46□□□□□ -0.41
COPB1-208ENST00000532088 IGHV4-34P06331 123 aa12.46□□□□□ -0.41
COPB1-208ENST00000532088 POLBP06746 335 aa12.46□□□□□ -0.41
COPB1-208ENST00000532088 BPIP17213 487 aa12.46□□□□□ -0.41
COPB1-208ENST00000532088 SPAM1P38567 509 aa12.46□□□□□ -0.41
COPB1-208ENST00000532088 DPP6P42658 865 aa12.46□□□□□ -0.41
COPB1-208ENST00000532088 PPP2CBP62714 309 aa12.46□□□□□ -0.41
COPB1-208ENST00000532088 PPP2CAP67775 309 aa12.46□□□□□ -0.41
COPB1-208ENST00000532088 RELBQ01201 579 aa12.46□□□□□ -0.41
COPB1-208ENST00000532088 RPL6Q02878 288 aaKnown RBP12.46□□□□□ -0.41
COPB1-208ENST00000532088 SEPT6Q14141 434 aa12.46□□□□□ -0.41
COPB1-208ENST00000532088 ACOX1Q15067 660 aa12.46□□□□□ -0.41
COPB1-208ENST00000532088 PTPRRQ15256 657 aa12.46□□□□□ -0.41
COPB1-208ENST00000532088 BBS9Q3SYG4 887 aa12.46□□□□□ -0.41
COPB1-208ENST00000532088 SPANXN3Q5MJ09 141 aa12.46□□□□□ -0.41
COPB1-208ENST00000532088 HENMT1Q5T8I9 393 aaKnown RBP12.46□□□□□ -0.41
COPB1-208ENST00000532088 STEAP4Q687X5 459 aa12.46□□□□□ -0.41
COPB1-208ENST00000532088 SEL1L3Q68CR1 1132 aa12.46□□□□□ -0.41
COPB1-208ENST00000532088 KIAA0930Q6ICG6 404 aaPredicted RBP12.46□□□□□ -0.41
COPB1-208ENST00000532088 ZNF449Q6P9G9 518 aa12.46□□□□□ -0.41
COPB1-208ENST00000532088 ZC3H14Q6PJT7 736 aaKnown RBP12.46□□□□□ -0.41
COPB1-208ENST00000532088 CYS1Q717R9 158 aa12.46□□□□□ -0.41
COPB1-208ENST00000532088 AGGF1Q8N302 714 aaeCLIP12.46□□□□□ -0.41
COPB1-208ENST00000532088 MPP5Q8N3R9 675 aa12.46□□□□□ -0.41
COPB1-208ENST00000532088 OR4K2Q8NGD2 314 aa12.46□□□□□ -0.41
COPB1-208ENST00000532088 OR13J1Q8NGT2 312 aa12.46□□□□□ -0.41
COPB1-208ENST00000532088 SCG3Q8WXD2 468 aaKnown RBP12.46□□□□□ -0.41
COPB1-208ENST00000532088 NUS1Q96E22 293 aa12.46□□□□□ -0.41
COPB1-208ENST00000532088 TTC25Q96NG3 672 aa12.46□□□□□ -0.41
COPB1-208ENST00000532088 HINFPQ9BQA5 517 aa12.46□□□□□ -0.41
COPB1-208ENST00000532088 ZSCAN5AQ9BUG6 496 aa12.46□□□□□ -0.41
COPB1-208ENST00000532088 WRAP53Q9BUR4 548 aaKnown RBP12.46□□□□□ -0.41
COPB1-208ENST00000532088 FAM83DQ9H4H8 585 aa12.46□□□□□ -0.41
COPB1-208ENST00000532088 C6orf106Q9H6K1 298 aaPredicted RBP12.46□□□□□ -0.41
COPB1-208ENST00000532088 CHRAC1Q9NRG0 131 aa12.46□□□□□ -0.41
COPB1-208ENST00000532088 NFU1Q9UMS0 254 aa12.46□□□□□ -0.41
COPB1-208ENST00000532088 EML5Q05BV3 1969 aa12.46□□□□□ -0.41
COPB1-208ENST00000532088 SCN8AQ9UQD0 1980 aa12.45□□□□□ -0.42
COPB1-208ENST00000532088 ZNF106Q9H2Y7 1883 aaKnown RBP12.45□□□□□ -0.42
COPB1-208ENST00000532088 A0A1W2PPC4 97 aa12.45□□□□□ -0.42
COPB1-208ENST00000532088 FAM47DPA6NHR8 397 aa12.45□□□□□ -0.42
COPB1-208ENST00000532088 A8MX80 341 aa12.45□□□□□ -0.42
COPB1-208ENST00000532088 PRAMEF26H0Y7S4 382 aa12.45□□□□□ -0.42
COPB1-208ENST00000532088 RHOBTB1O94844 696 aa12.45□□□□□ -0.42
COPB1-208ENST00000532088 HNRNPA2B1P22626 353 aaKnown RBP12.45□□□□□ -0.42
COPB1-208ENST00000532088 CD27P26842 260 aa12.45□□□□□ -0.42
COPB1-208ENST00000532088 AKT2P31751 481 aa12.45□□□□□ -0.42
COPB1-208ENST00000532088 ETV3P41162 512 aa12.45□□□□□ -0.42
COPB1-208ENST00000532088 ELK3P41970 407 aa12.45□□□□□ -0.42
COPB1-208ENST00000532088 MTM1Q13496 603 aa12.45□□□□□ -0.42
COPB1-208ENST00000532088 FGL2Q14314 439 aa12.45□□□□□ -0.42
COPB1-208ENST00000532088 LRRC14Q15048 493 aa12.45□□□□□ -0.42
COPB1-208ENST00000532088 ANKRD20A4Q4UJ75 823 aa12.45□□□□□ -0.42
COPB1-208ENST00000532088 PMS2CLQ68D20 193 aa12.45□□□□□ -0.42
COPB1-208ENST00000532088 ESRP1Q6NXG1 681 aaKnown RBP12.45□□□□□ -0.42
COPB1-208ENST00000532088 CASC4Q6P4E1 433 aa12.45□□□□□ -0.42
COPB1-208ENST00000532088 Q6ZVL8 140 aa12.45□□□□□ -0.42
COPB1-208ENST00000532088 LPCAT2Q7L5N7 544 aa12.45□□□□□ -0.42
COPB1-208ENST00000532088 LMNTD2Q8IXW0 634 aa12.45□□□□□ -0.42
COPB1-208ENST00000532088 ZBED8Q8IZ13 594 aa12.45□□□□□ -0.42
COPB1-208ENST00000532088 TRAM1L1Q8N609 369 aa12.45□□□□□ -0.42
COPB1-208ENST00000532088 TP53I13Q8NBR0 393 aaPredicted RBP12.45□□□□□ -0.42
COPB1-208ENST00000532088 FBXO36Q8NEA4 188 aa12.45□□□□□ -0.42
COPB1-208ENST00000532088 MYRIPQ8NFW9 859 aa12.45□□□□□ -0.42
COPB1-208ENST00000532088 GABPB2Q8TAK5 448 aaPredicted RBP12.45□□□□□ -0.42
COPB1-208ENST00000532088 PYROXD1Q8WU10 500 aa12.45□□□□□ -0.42
COPB1-208ENST00000532088 DNASE2BQ8WZ79 361 aa12.45□□□□□ -0.42
COPB1-208ENST00000532088 CENPTQ96BT3 561 aa12.45□□□□□ -0.42
COPB1-208ENST00000532088 BIRC7Q96CA5 298 aa12.45□□□□□ -0.42
COPB1-208ENST00000532088 CDKN2AIPNLQ96HQ2 116 aa12.45□□□□□ -0.42
COPB1-208ENST00000532088 DNAJC1Q96KC8 554 aaKnown RBP12.45□□□□□ -0.42
COPB1-208ENST00000532088 PWWP2AQ96N64 755 aa12.45□□□□□ -0.42
COPB1-208ENST00000532088 WDR83Q9BRX9 315 aaKnown RBP12.45□□□□□ -0.42
COPB1-208ENST00000532088 ABCG8Q9H221 673 aa12.45□□□□□ -0.42
COPB1-208ENST00000532088 SAYSD1Q9NPB0 183 aa12.45□□□□□ -0.42
COPB1-208ENST00000532088 DNAAF2Q9NVR5 837 aaKnown RBP12.45□□□□□ -0.42
COPB1-208ENST00000532088 SMOXQ9NWM0 555 aa12.45□□□□□ -0.42
COPB1-208ENST00000532088 ZC3H7BQ9UGR2 993 aaKnown RBP12.45□□□□□ -0.42
COPB1-208ENST00000532088 HS3ST3A1Q9Y663 406 aa12.45□□□□□ -0.42
COPB1-208ENST00000532088 MAD1L1Q9Y6D9 718 aa12.45□□□□□ -0.42
COPB1-208ENST00000532088 RPS6KL1Q9Y6S9 549 aa12.45□□□□□ -0.42
COPB1-208ENST00000532088 FAM169AQ9Y6X4 670 aa12.45□□□□□ -0.42
COPB1-208ENST00000532088 GLYATL1P3A0A0U1RQE8 302 aa12.44□□□□□ -0.42
COPB1-208ENST00000532088 ZCWPW2A0A1B0GU75 182 aa12.44□□□□□ -0.42
COPB1-208ENST00000532088 AGAP14A8MT82 685 aa12.44□□□□□ -0.42
COPB1-208ENST00000532088 PAK4O96013 591 aaPredicted RBP12.44□□□□□ -0.42
COPB1-208ENST00000532088 HOXC4P09017 264 aaPredicted RBP12.44□□□□□ -0.42
COPB1-208ENST00000532088 BCKDHBP21953 392 aa12.44□□□□□ -0.42
COPB1-208ENST00000532088 NMBRP28336 390 aa12.44□□□□□ -0.42
COPB1-208ENST00000532088 HOXD12P35452 270 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms