RNA–Protein interactions for RNA: ENST00000529469.1

SOX6-212, Transcript of SRY-box 6, humanhuman

TSL 4

Gene SOX6, Length 549 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-212ENST00000529469 BEST3Q8N1M1 668 aa4.31□□□□□ -1.72
SOX6-212ENST00000529469 NME8Q8N427 588 aa4.31□□□□□ -1.72
SOX6-212ENST00000529469 SRBD1Q8N5C6 995 aaKnown RBP4.31□□□□□ -1.72
SOX6-212ENST00000529469 RBMXL3Q8N7X1 1067 aaKnown RBP4.31□□□□□ -1.72
SOX6-212ENST00000529469 CSNK2A3Q8NEV1 391 aa4.31□□□□□ -1.72
SOX6-212ENST00000529469 SECISBP2LQ93073 1101 aaKnown RBP4.31□□□□□ -1.72
SOX6-212ENST00000529469 ZKSCAN4Q969J2 545 aaPredicted RBP4.31□□□□□ -1.72
SOX6-212ENST00000529469 IGSF21Q96ID5 467 aa4.31□□□□□ -1.72
SOX6-212ENST00000529469 C1orf74Q96LT6 269 aa4.31□□□□□ -1.72
SOX6-212ENST00000529469 HARBI1Q96MB7 349 aa4.31□□□□□ -1.72
SOX6-212ENST00000529469 CMKLR1Q99788 373 aa4.31□□□□□ -1.72
SOX6-212ENST00000529469 LTB4R2Q9NPC1 389 aa4.31□□□□□ -1.72
SOX6-212ENST00000529469 MAP3K20Q9NYL2 800 aaKnown RBP4.31□□□□□ -1.72
SOX6-212ENST00000529469 CLIC4Q9Y696 253 aa4.31□□□□□ -1.72
SOX6-212ENST00000529469 SAA2-SAA4A0A096LPE2 208 aa4.3□□□□□ -1.72
SOX6-212ENST00000529469 A0A0G2JPF8 293 aa4.3□□□□□ -1.72
SOX6-212ENST00000529469 HNRNPCL2B2RXH8 293 aa4.3□□□□□ -1.72
SOX6-212ENST00000529469 HNRNPCL3B7ZW38 293 aa4.3□□□□□ -1.72
SOX6-212ENST00000529469 HCRTR2O43614 444 aa4.3□□□□□ -1.72
SOX6-212ENST00000529469 HNRNPCL1O60812 293 aaKnown RBP4.3□□□□□ -1.72
SOX6-212ENST00000529469 NDUFS3O75489 264 aa4.3□□□□□ -1.72
SOX6-212ENST00000529469 TIPRLO75663 272 aa4.3□□□□□ -1.72
SOX6-212ENST00000529469 HNRNPCL4P0DMR1 293 aa4.3□□□□□ -1.72
SOX6-212ENST00000529469 ACADMP11310 421 aa4.3□□□□□ -1.72
SOX6-212ENST00000529469 RARGP13631 454 aa4.3□□□□□ -1.72
SOX6-212ENST00000529469 S1PR1P21453 382 aa4.3□□□□□ -1.72
SOX6-212ENST00000529469 BDNFP23560 247 aa4.3□□□□□ -1.72
SOX6-212ENST00000529469 RRM1P23921 792 aa4.3□□□□□ -1.72
SOX6-212ENST00000529469 ARL3P36405 182 aa4.3□□□□□ -1.72
SOX6-212ENST00000529469 NLRP5P59047 1200 aa4.3□□□□□ -1.72
SOX6-212ENST00000529469 FOXM1Q08050 763 aa4.3□□□□□ -1.72
SOX6-212ENST00000529469 SLC20A2Q08357 652 aa4.3□□□□□ -1.72
SOX6-212ENST00000529469 ZBTB17Q13105 803 aa4.3□□□□□ -1.72
SOX6-212ENST00000529469 EIF4A2Q14240 407 aaKnown RBP4.3□□□□□ -1.72
SOX6-212ENST00000529469 KLHL22Q53GT1 634 aa4.3□□□□□ -1.72
SOX6-212ENST00000529469 LRIF1Q5T3J3 769 aa4.3□□□□□ -1.72
SOX6-212ENST00000529469 GKAP1Q5VSY0 366 aaPredicted RBP4.3□□□□□ -1.72
SOX6-212ENST00000529469 WDR78Q5VTH9 848 aa4.3□□□□□ -1.72
SOX6-212ENST00000529469 IKBIPQ70UQ0 350 aa4.3□□□□□ -1.72
SOX6-212ENST00000529469 NRROSQ86YC3 692 aa4.3□□□□□ -1.72
SOX6-212ENST00000529469 DCP1BQ8IZD4 617 aaKnown RBP4.3□□□□□ -1.72
SOX6-212ENST00000529469 WDTC1Q8N5D0 677 aa4.3□□□□□ -1.72
SOX6-212ENST00000529469 ACVR1CQ8NER5 493 aa4.3□□□□□ -1.72
SOX6-212ENST00000529469 SPATA20Q8TB22 786 aa4.3□□□□□ -1.72
SOX6-212ENST00000529469 APBB2Q92870 758 aa4.3□□□□□ -1.72
SOX6-212ENST00000529469 IL17FQ96PD4 163 aa4.3□□□□□ -1.72
SOX6-212ENST00000529469 CHCHD6Q9BRQ6 235 aa4.3□□□□□ -1.72
SOX6-212ENST00000529469 KRTAP1-5Q9BYS1 174 aa4.3□□□□□ -1.72
SOX6-212ENST00000529469 CSTL1Q9H114 145 aa4.3□□□□□ -1.72
SOX6-212ENST00000529469 PIGMQ9H3S5 423 aa4.3□□□□□ -1.72
SOX6-212ENST00000529469 ZNF556Q9HAH1 456 aa4.3□□□□□ -1.72
SOX6-212ENST00000529469 LRRC4Q9HBW1 653 aa4.3□□□□□ -1.72
SOX6-212ENST00000529469 PCDH9Q9HC56 1237 aa4.3□□□□□ -1.72
SOX6-212ENST00000529469 ACSL5Q9ULC5 683 aa4.3□□□□□ -1.72
SOX6-212ENST00000529469 LOXL2Q9Y4K0 774 aa4.3□□□□□ -1.72
SOX6-212ENST00000529469 GREB1LQ9C091 1923 aaPredicted RBP4.29□□□□□ -1.72
SOX6-212ENST00000529469 PDS5AQ29RF7 1337 aaKnown RBP4.29□□□□□ -1.72
SOX6-212ENST00000529469 GOLGA6L9A6NEM1 432 aa4.29□□□□□ -1.72
SOX6-212ENST00000529469 TULP2O00295 520 aa4.29□□□□□ -1.72
SOX6-212ENST00000529469 CLGNO14967 610 aa4.29□□□□□ -1.72
SOX6-212ENST00000529469 ATP2A1O14983 1001 aa4.29□□□□□ -1.72
SOX6-212ENST00000529469 JRKO75564 520 aa4.29□□□□□ -1.72
SOX6-212ENST00000529469 SNRNP70P08621 437 aaKnown RBP4.29□□□□□ -1.72
SOX6-212ENST00000529469 HLA-DOBP13765 273 aa4.29□□□□□ -1.72
SOX6-212ENST00000529469 CDH2P19022 906 aaPredicted RBP4.29□□□□□ -1.72
SOX6-212ENST00000529469 UBA1P22314 1058 aaKnown RBP4.29□□□□□ -1.72
SOX6-212ENST00000529469 TM4SF1P30408 202 aa4.29□□□□□ -1.72
SOX6-212ENST00000529469 CORO1AP31146 461 aaKnown RBP4.29□□□□□ -1.72
SOX6-212ENST00000529469 PPARGP37231 505 aaPredicted RBP4.29□□□□□ -1.72
SOX6-212ENST00000529469 TMPOP42166 694 aaKnown RBP4.29□□□□□ -1.72
SOX6-212ENST00000529469 GAS1P54826 345 aa4.29□□□□□ -1.72
SOX6-212ENST00000529469 ERVFC1-1P60608 527 aa4.29□□□□□ -1.72
SOX6-212ENST00000529469 RELQ04864 619 aaPredicted RBP4.29□□□□□ -1.72
SOX6-212ENST00000529469 ILF3Q12906 894 aaKnown RBP eCLIP4.29□□□□□ -1.72
SOX6-212ENST00000529469 FAM122CQ6P4D5 195 aa4.29□□□□□ -1.72
SOX6-212ENST00000529469 SPSB3Q6PJ21 355 aa4.29□□□□□ -1.72
SOX6-212ENST00000529469 GLDNQ6ZMI3 551 aaPredicted RBP4.29□□□□□ -1.72
SOX6-212ENST00000529469 PCGF5Q86SE9 256 aa4.29□□□□□ -1.72
SOX6-212ENST00000529469 C1orf87Q8N0U7 546 aa4.29□□□□□ -1.72
SOX6-212ENST00000529469 SLC20A1Q8WUM9 679 aa4.29□□□□□ -1.72
SOX6-212ENST00000529469 SORCS1Q8WY21 1168 aa4.29□□□□□ -1.72
SOX6-212ENST00000529469 FIG4Q92562 907 aa4.29□□□□□ -1.72
SOX6-212ENST00000529469 USP6NLQ92738 828 aa4.29□□□□□ -1.72
SOX6-212ENST00000529469 ELMOD3Q96FG2 381 aa4.29□□□□□ -1.72
SOX6-212ENST00000529469 LMLNQ96KR4 655 aa4.29□□□□□ -1.72
SOX6-212ENST00000529469 DUX5Q96PT3 197 aa4.29□□□□□ -1.72
SOX6-212ENST00000529469 MTERF1Q99551 399 aaKnown RBP4.29□□□□□ -1.72
SOX6-212ENST00000529469 RETREG1Q9H6L5 497 aa4.29□□□□□ -1.72
SOX6-212ENST00000529469 EBF2Q9HAK2 575 aa4.29□□□□□ -1.72
SOX6-212ENST00000529469 SEPT11Q9NVA2 429 aaKnown RBP4.29□□□□□ -1.72
SOX6-212ENST00000529469 SETD4Q9NVD3 440 aa4.29□□□□□ -1.72
SOX6-212ENST00000529469 CWC15Q9P013 229 aaKnown RBP4.29□□□□□ -1.72
SOX6-212ENST00000529469 COPG2Q9UBF2 871 aa4.29□□□□□ -1.72
SOX6-212ENST00000529469 VDAC3Q9Y277 283 aa4.29□□□□□ -1.72
SOX6-212ENST00000529469 ITIH6Q6UXX5 1313 aa4.28□□□□□ -1.72
SOX6-212ENST00000529469 RUSC2Q8N2Y8 1516 aa4.28□□□□□ -1.72
SOX6-212ENST00000529469 IGHV4OR15-8A0A075B7B6 117 aa4.28□□□□□ -1.72
SOX6-212ENST00000529469 DENND3A2RUS2 1198 aa4.28□□□□□ -1.72
SOX6-212ENST00000529469 A8MZ25 164 aa4.28□□□□□ -1.72
SOX6-212ENST00000529469 PRAC2D3DTV9 90 aa4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms