RNA–Protein interactions for RNA: ENST00000529173.5

RPS3-212, Transcript of ribosomal protein S3, humanhuman

TSL 5

Gene RPS3, Length 1,373 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3-212ENST00000529173 TDP1Q9NUW8 608 aa13.2□□□□□ -0.3
RPS3-212ENST00000529173 BCAP29Q9UHQ4 241 aa13.2□□□□□ -0.3
RPS3-212ENST00000529173 ZDHHC2Q9UIJ5 367 aa13.2□□□□□ -0.3
RPS3-212ENST00000529173 RNF112Q9ULX5 631 aa13.2□□□□□ -0.3
RPS3-212ENST00000529173 NUMBLQ9Y6R0 609 aa13.2□□□□□ -0.3
RPS3-212ENST00000529173 GBF1Q92538 1859 aa13.2□□□□□ -0.3
RPS3-212ENST00000529173 GRID2O43424 1007 aa13.2□□□□□ -0.3
RPS3-212ENST00000529173 VPS4BO75351 444 aa13.2□□□□□ -0.3
RPS3-212ENST00000529173 POP4O95707 220 aaKnown RBP13.2□□□□□ -0.3
RPS3-212ENST00000529173 RHOP08100 348 aa13.2□□□□□ -0.3
RPS3-212ENST00000529173 GFAPP14136 432 aa13.2□□□□□ -0.3
RPS3-212ENST00000529173 SP100P23497 879 aaPredicted RBP13.2□□□□□ -0.3
RPS3-212ENST00000529173 SPAM1P38567 509 aa13.2□□□□□ -0.3
RPS3-212ENST00000529173 NNMTP40261 264 aa13.2□□□□□ -0.3
RPS3-212ENST00000529173 POLR2LP62875 67 aaKnown RBP13.2□□□□□ -0.3
RPS3-212ENST00000529173 ZXDBP98169 803 aa13.2□□□□□ -0.3
RPS3-212ENST00000529173 KLF10Q13118 480 aa13.2□□□□□ -0.3
RPS3-212ENST00000529173 NAA25Q14CX7 972 aa13.2□□□□□ -0.3
RPS3-212ENST00000529173 SLC9B1Q4ZJI4 515 aa13.2□□□□□ -0.3
RPS3-212ENST00000529173 ZNF678Q5SXM1 525 aa13.2□□□□□ -0.3
RPS3-212ENST00000529173 TPGS1Q6ZTW0 290 aa13.2□□□□□ -0.3
RPS3-212ENST00000529173 TAS2R42Q7RTR8 314 aa13.2□□□□□ -0.3
RPS3-212ENST00000529173 ADAMTSL2Q86TH1 951 aa13.2□□□□□ -0.3
RPS3-212ENST00000529173 PIM3Q86V86 326 aa13.2□□□□□ -0.3
RPS3-212ENST00000529173 SCUBE1Q8IWY4 988 aa13.2□□□□□ -0.3
RPS3-212ENST00000529173 LSMEM2Q8N112 164 aa13.2□□□□□ -0.3
RPS3-212ENST00000529173 RYBPQ8N488 228 aaPredicted RBP13.2□□□□□ -0.3
RPS3-212ENST00000529173 ENDOVQ8N8Q3 282 aaKnown RBP13.2□□□□□ -0.3
RPS3-212ENST00000529173 RBM15BQ8NDT2 890 aaKnown RBP13.2□□□□□ -0.3
RPS3-212ENST00000529173 SPPL3Q8TCT6 385 aa13.2□□□□□ -0.3
RPS3-212ENST00000529173 GRIN3AQ8TCU5 1115 aa13.2□□□□□ -0.3
RPS3-212ENST00000529173 WFDC5Q8TCV5 224 aa13.2□□□□□ -0.3
RPS3-212ENST00000529173 MICAL1Q8TDZ2 1067 aa13.2□□□□□ -0.3
RPS3-212ENST00000529173 ANKRD49Q8WVL7 239 aa13.2□□□□□ -0.3
RPS3-212ENST00000529173 ULK4Q96C45 1275 aa13.2□□□□□ -0.3
RPS3-212ENST00000529173 SGF29Q96ES7 293 aa13.2□□□□□ -0.3
RPS3-212ENST00000529173 PRR11Q96HE9 360 aaPredicted RBP13.2□□□□□ -0.3
RPS3-212ENST00000529173 SERPINI1Q99574 410 aa13.2□□□□□ -0.3
RPS3-212ENST00000529173 NUF2Q9BZD4 464 aa13.2□□□□□ -0.3
RPS3-212ENST00000529173 TM6SF2Q9BZW4 377 aa13.2□□□□□ -0.3
RPS3-212ENST00000529173 MEAF6Q9HAF1 191 aa13.2□□□□□ -0.3
RPS3-212ENST00000529173 RAD18Q9NS91 495 aa13.2□□□□□ -0.3
RPS3-212ENST00000529173 MARK1Q9P0L2 795 aa13.2□□□□□ -0.3
RPS3-212ENST00000529173 EVLQ9UI08 416 aaPredicted RBP13.2□□□□□ -0.3
RPS3-212ENST00000529173 PRPF19Q9UMS4 504 aaKnown RBP13.2□□□□□ -0.3
RPS3-212ENST00000529173 ZNF106Q9H2Y7 1883 aaKnown RBP13.19□□□□□ -0.3
RPS3-212ENST00000529173 C1orf232A0A0U1RR37 186 aa13.19□□□□□ -0.3
RPS3-212ENST00000529173 RGSL1A5PLK6 1076 aa13.19□□□□□ -0.3
RPS3-212ENST00000529173 SUPT3HB4E1H0 165 aa13.19□□□□□ -0.3
RPS3-212ENST00000529173 E9PBE3 544 aa13.19□□□□□ -0.3
RPS3-212ENST00000529173 GIPC1O14908 333 aa13.19□□□□□ -0.3
RPS3-212ENST00000529173 DCXO43602 365 aa13.19□□□□□ -0.3
RPS3-212ENST00000529173 ZBTB14O43829 449 aa13.19□□□□□ -0.3
RPS3-212ENST00000529173 KLHL41O60662 606 aa13.19□□□□□ -0.3
RPS3-212ENST00000529173 SUPT3HO75486 399 aa13.19□□□□□ -0.3
RPS3-212ENST00000529173 SUPT7LO94864 414 aa13.19□□□□□ -0.3
RPS3-212ENST00000529173 MLYCDO95822 493 aa13.19□□□□□ -0.3
RPS3-212ENST00000529173 S100BP04271 92 aaPredicted RBP13.19□□□□□ -0.3
RPS3-212ENST00000529173 PABPC1P11940 636 aaKnown RBP13.19□□□□□ -0.3
RPS3-212ENST00000529173 SRCP12931 536 aa13.19□□□□□ -0.3
RPS3-212ENST00000529173 COX4I1P13073 169 aa13.19□□□□□ -0.3
RPS3-212ENST00000529173 WEE1P30291 646 aa13.19□□□□□ -0.3
RPS3-212ENST00000529173 VASPP50552 380 aaPredicted RBP13.19□□□□□ -0.3
RPS3-212ENST00000529173 ATP4BP51164 291 aa13.19□□□□□ -0.3
RPS3-212ENST00000529173 ERVFC1P60507 584 aa13.19□□□□□ -0.3
RPS3-212ENST00000529173 PEX6Q13608 980 aa13.19□□□□□ -0.3
RPS3-212ENST00000529173 SQLEQ14534 574 aa13.19□□□□□ -0.3
RPS3-212ENST00000529173 PTPRCAPQ14761 206 aa13.19□□□□□ -0.3
RPS3-212ENST00000529173 TEAD2Q15562 447 aa13.19□□□□□ -0.3
RPS3-212ENST00000529173 PDCD2Q16342 344 aaPredicted RBP13.19□□□□□ -0.3
RPS3-212ENST00000529173 LSM12Q3MHD2 195 aaKnown RBP13.19□□□□□ -0.3
RPS3-212ENST00000529173 TTLL9Q3SXZ7 439 aa13.19□□□□□ -0.3
RPS3-212ENST00000529173 NXNQ6DKJ4 435 aa13.19□□□□□ -0.3
RPS3-212ENST00000529173 TPRG1Q6ZUI0 275 aa13.19□□□□□ -0.3
RPS3-212ENST00000529173 LYSMD3Q7Z3D4 306 aa13.19□□□□□ -0.3
RPS3-212ENST00000529173 CLYBLQ8N0X4 340 aa13.19□□□□□ -0.3
RPS3-212ENST00000529173 AHI1Q8N157 1196 aa13.19□□□□□ -0.3
RPS3-212ENST00000529173 FBXO39Q8N4B4 442 aa13.19□□□□□ -0.3
RPS3-212ENST00000529173 SPATA6LQ8N4H0 392 aa13.19□□□□□ -0.3
RPS3-212ENST00000529173 PTGR2Q8N8N7 351 aaPredicted RBP13.19□□□□□ -0.3
RPS3-212ENST00000529173 TTC16Q8NEE8 873 aa13.19□□□□□ -0.3
RPS3-212ENST00000529173 WFIKKN2Q8TEU8 576 aa13.19□□□□□ -0.3
RPS3-212ENST00000529173 AGAP11Q8TF27 550 aa13.19□□□□□ -0.3
RPS3-212ENST00000529173 SLC22A17Q8WUG5 538 aa13.19□□□□□ -0.3
RPS3-212ENST00000529173 JADE3Q92613 823 aa13.19□□□□□ -0.3
RPS3-212ENST00000529173 IRF7Q92985 503 aa13.19□□□□□ -0.3
RPS3-212ENST00000529173 PDLIM5Q96HC4 596 aaKnown RBP13.19□□□□□ -0.3
RPS3-212ENST00000529173 LMLNQ96KR4 655 aa13.19□□□□□ -0.3
RPS3-212ENST00000529173 ATOH8Q96SQ7 321 aa13.19□□□□□ -0.3
RPS3-212ENST00000529173 CCT7Q99832 543 aa13.19□□□□□ -0.3
RPS3-212ENST00000529173 BBS2Q9BXC9 721 aa13.19□□□□□ -0.3
RPS3-212ENST00000529173 C1QTNF3Q9BXJ4 246 aa13.19□□□□□ -0.3
RPS3-212ENST00000529173 GSTO2Q9H4Y5 243 aa13.19□□□□□ -0.3
RPS3-212ENST00000529173 CYP4F12Q9HCS2 524 aa13.19□□□□□ -0.3
RPS3-212ENST00000529173 MRPL40Q9NQ50 206 aaKnown RBP13.19□□□□□ -0.3
RPS3-212ENST00000529173 NUDT4Q9NZJ9 180 aa13.19□□□□□ -0.3
RPS3-212ENST00000529173 KLHL42Q9P2K6 505 aa13.19□□□□□ -0.3
RPS3-212ENST00000529173 STOML1Q9UBI4 398 aa13.19□□□□□ -0.3
RPS3-212ENST00000529173 PPIL1Q9Y3C6 166 aa13.19□□□□□ -0.3
RPS3-212ENST00000529173 GLYATL1P3A0A0U1RQE8 302 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms