RNA–Protein interactions for RNA: ENST00000528402.5

ECHDC1-220, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 1 (best) BASIC

Gene ECHDC1, Length 1,449 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-220ENST00000528402 NFKBIAP25963 317 aa14.7□□□□□ -0.06
ECHDC1-220ENST00000528402 PGGT1BP53609 377 aa14.7□□□□□ -0.06
ECHDC1-220ENST00000528402 INHBCP55103 352 aa14.7□□□□□ -0.06
ECHDC1-220ENST00000528402 IL2P60568 153 aa14.7□□□□□ -0.06
ECHDC1-220ENST00000528402 TRMT5Q32P41 509 aaKnown RBP14.7□□□□□ -0.06
ECHDC1-220ENST00000528402 LSM12Q3MHD2 195 aaKnown RBP14.7□□□□□ -0.06
ECHDC1-220ENST00000528402 GPR33Q49SQ1 333 aa14.7□□□□□ -0.06
ECHDC1-220ENST00000528402 ATXN7L2Q5T6C5 722 aaPredicted RBP14.7□□□□□ -0.06
ECHDC1-220ENST00000528402 GRAMD4Q6IC98 578 aa14.7□□□□□ -0.06
ECHDC1-220ENST00000528402 SNX20Q7Z614 316 aa14.7□□□□□ -0.06
ECHDC1-220ENST00000528402 NET1Q7Z628 596 aaPredicted RBP14.7□□□□□ -0.06
ECHDC1-220ENST00000528402 UBE2Q1Q7Z7E8 422 aa14.7□□□□□ -0.06
ECHDC1-220ENST00000528402 CUZD1Q86UP6 607 aa14.7□□□□□ -0.06
ECHDC1-220ENST00000528402 CAMK1DQ8IU85 385 aa14.7□□□□□ -0.06
ECHDC1-220ENST00000528402 CLYBLQ8N0X4 340 aa14.7□□□□□ -0.06
ECHDC1-220ENST00000528402 PAF1Q8N7H5 531 aa14.7□□□□□ -0.06
ECHDC1-220ENST00000528402 MAPK15Q8TD08 544 aa14.7□□□□□ -0.06
ECHDC1-220ENST00000528402 MICAL1Q8TDZ2 1067 aa14.7□□□□□ -0.06
ECHDC1-220ENST00000528402 AGAP11Q8TF27 550 aa14.7□□□□□ -0.06
ECHDC1-220ENST00000528402 SLC22A17Q8WUG5 538 aa14.7□□□□□ -0.06
ECHDC1-220ENST00000528402 SAMD11Q96NU1 681 aa14.7□□□□□ -0.06
ECHDC1-220ENST00000528402 BIRC8Q96P09 236 aa14.7□□□□□ -0.06
ECHDC1-220ENST00000528402 ATOH8Q96SQ7 321 aa14.7□□□□□ -0.06
ECHDC1-220ENST00000528402 DENND2DQ9H6A0 471 aaPredicted RBP14.7□□□□□ -0.06
ECHDC1-220ENST00000528402 MEAF6Q9HAF1 191 aa14.7□□□□□ -0.06
ECHDC1-220ENST00000528402 ZDHHC7Q9NXF8 308 aa14.7□□□□□ -0.06
ECHDC1-220ENST00000528402 NOP53Q9NZM5 478 aaKnown RBP14.7□□□□□ -0.06
ECHDC1-220ENST00000528402 EVLQ9UI08 416 aaPredicted RBP14.7□□□□□ -0.06
ECHDC1-220ENST00000528402 TRMT6Q9UJA5 497 aaKnown RBP14.7□□□□□ -0.06
ECHDC1-220ENST00000528402 PLA2G4CQ9UP65 541 aa14.7□□□□□ -0.06
ECHDC1-220ENST00000528402 KIAA0100Q14667 2235 aaKnown RBP14.7□□□□□ -0.06
ECHDC1-220ENST00000528402 CAPN8A6NHC0 703 aa14.69□□□□□ -0.06
ECHDC1-220ENST00000528402 HIDE1A8MVS5 230 aa14.69□□□□□ -0.06
ECHDC1-220ENST00000528402 STX16-NPEPL1H3BU86 382 aa14.69□□□□□ -0.06
ECHDC1-220ENST00000528402 STX16O14662 325 aa14.69□□□□□ -0.06
ECHDC1-220ENST00000528402 PRMT5O14744 637 aaPredicted RBP14.69□□□□□ -0.06
ECHDC1-220ENST00000528402 SUPT7LO94864 414 aa14.69□□□□□ -0.06
ECHDC1-220ENST00000528402 RHOP08100 348 aa14.69□□□□□ -0.06
ECHDC1-220ENST00000528402 COX4I1P13073 169 aa14.69□□□□□ -0.06
ECHDC1-220ENST00000528402 ITGALP20701 1170 aa14.69□□□□□ -0.06
ECHDC1-220ENST00000528402 WEE1P30291 646 aa14.69□□□□□ -0.06
ECHDC1-220ENST00000528402 CD70P32970 193 aa14.69□□□□□ -0.06
ECHDC1-220ENST00000528402 VASPP50552 380 aaPredicted RBP14.69□□□□□ -0.06
ECHDC1-220ENST00000528402 POLR2LP62875 67 aaKnown RBP14.69□□□□□ -0.06
ECHDC1-220ENST00000528402 CDC16Q13042 620 aa14.69□□□□□ -0.06
ECHDC1-220ENST00000528402 MYLK3Q32MK0 819 aa14.69□□□□□ -0.06
ECHDC1-220ENST00000528402 SWT1Q5T5J6 900 aaKnown RBP14.69□□□□□ -0.06
ECHDC1-220ENST00000528402 PAQR3Q6TCH7 311 aa14.69□□□□□ -0.06
ECHDC1-220ENST00000528402 TAS2R42Q7RTR8 314 aa14.69□□□□□ -0.06
ECHDC1-220ENST00000528402 PIM3Q86V86 326 aa14.69□□□□□ -0.06
ECHDC1-220ENST00000528402 GRIN3AQ8TCU5 1115 aa14.69□□□□□ -0.06
ECHDC1-220ENST00000528402 IRF7Q92985 503 aa14.69□□□□□ -0.06
ECHDC1-220ENST00000528402 C1QTNF3Q9BXJ4 246 aa14.69□□□□□ -0.06
ECHDC1-220ENST00000528402 NUF2Q9BZD4 464 aa14.69□□□□□ -0.06
ECHDC1-220ENST00000528402 GSTO2Q9H4Y5 243 aa14.69□□□□□ -0.06
ECHDC1-220ENST00000528402 PFDN4Q9NQP4 134 aa14.69□□□□□ -0.06
ECHDC1-220ENST00000528402 MAN1C1Q9NR34 630 aa14.69□□□□□ -0.06
ECHDC1-220ENST00000528402 GTSE1Q9NYZ3 720 aa14.69□□□□□ -0.06
ECHDC1-220ENST00000528402 MARK1Q9P0L2 795 aa14.69□□□□□ -0.06
ECHDC1-220ENST00000528402 CXXC1Q9P0U4 656 aaPredicted RBP14.69□□□□□ -0.06
ECHDC1-220ENST00000528402 INTS6Q9UL03 887 aaKnown RBP14.69□□□□□ -0.06
ECHDC1-220ENST00000528402 RNF112Q9ULX5 631 aa14.69□□□□□ -0.06
ECHDC1-220ENST00000528402 TRAF6Q9Y4K3 522 aa14.69□□□□□ -0.06
ECHDC1-220ENST00000528402 NEMP2A6NFY4 417 aa14.68□□□□□ -0.06
ECHDC1-220ENST00000528402 A8MUI8 341 aa14.68□□□□□ -0.06
ECHDC1-220ENST00000528402 E5RI56 91 aa14.68□□□□□ -0.06
ECHDC1-220ENST00000528402 E9PBE3 544 aa14.68□□□□□ -0.06
ECHDC1-220ENST00000528402 K7ERQ8 282 aa14.68□□□□□ -0.06
ECHDC1-220ENST00000528402 SMAD6O43541 496 aaKnown RBP14.68□□□□□ -0.06
ECHDC1-220ENST00000528402 DCXO43602 365 aa14.68□□□□□ -0.06
ECHDC1-220ENST00000528402 KLK8O60259 260 aa14.68□□□□□ -0.06
ECHDC1-220ENST00000528402 KLHL41O60662 606 aa14.68□□□□□ -0.06
ECHDC1-220ENST00000528402 SRCP12931 536 aa14.68□□□□□ -0.06
ECHDC1-220ENST00000528402 GJA1P17302 382 aa14.68□□□□□ -0.06
ECHDC1-220ENST00000528402 CPOXP36551 454 aa14.68□□□□□ -0.06
ECHDC1-220ENST00000528402 CCNG1P51959 295 aa14.68□□□□□ -0.06
ECHDC1-220ENST00000528402 MAPRE2Q15555 327 aa14.68□□□□□ -0.06
ECHDC1-220ENST00000528402 TEAD2Q15562 447 aa14.68□□□□□ -0.06
ECHDC1-220ENST00000528402 UNC50Q53HI1 259 aa14.68□□□□□ -0.06
ECHDC1-220ENST00000528402 CARD16Q5EG05 197 aa14.68□□□□□ -0.06
ECHDC1-220ENST00000528402 WLSQ5T9L3 541 aa14.68□□□□□ -0.06
ECHDC1-220ENST00000528402 PSAPL1Q6NUJ1 521 aa14.68□□□□□ -0.06
ECHDC1-220ENST00000528402 EFL1Q7Z2Z2 1120 aaKnown RBP14.68□□□□□ -0.06
ECHDC1-220ENST00000528402 LYSMD3Q7Z3D4 306 aa14.68□□□□□ -0.06
ECHDC1-220ENST00000528402 RBFAQ8N0V3 343 aa14.68□□□□□ -0.06
ECHDC1-220ENST00000528402 PTERQ96BW5 349 aa14.68□□□□□ -0.06
ECHDC1-220ENST00000528402 ECHDC3Q96DC8 303 aa14.68□□□□□ -0.06
ECHDC1-220ENST00000528402 PHF21BQ96EK2 531 aa14.68□□□□□ -0.06
ECHDC1-220ENST00000528402 SCRN2Q96FV2 425 aa14.68□□□□□ -0.06
ECHDC1-220ENST00000528402 OR52B2Q96RD2 323 aa14.68□□□□□ -0.06
ECHDC1-220ENST00000528402 GPR21Q99679 349 aa14.68□□□□□ -0.06
ECHDC1-220ENST00000528402 TM6SF2Q9BZW4 377 aa14.68□□□□□ -0.06
ECHDC1-220ENST00000528402 P2RY12Q9H244 342 aa14.68□□□□□ -0.06
ECHDC1-220ENST00000528402 SUV39H2Q9H5I1 410 aa14.68□□□□□ -0.06
ECHDC1-220ENST00000528402 ZNF385DQ9H6B1 395 aa14.68□□□□□ -0.06
ECHDC1-220ENST00000528402 CYP4F12Q9HCS2 524 aa14.68□□□□□ -0.06
ECHDC1-220ENST00000528402 GNPTGQ9UJJ9 305 aa14.68□□□□□ -0.06
ECHDC1-220ENST00000528402 DHRS7Q9Y394 339 aa14.68□□□□□ -0.06
ECHDC1-220ENST00000528402 TRBV5-4A0A0C4DH59 114 aa14.67□□□□□ -0.06
ECHDC1-220ENST00000528402 SCAMP3O14828 347 aaKnown RBP14.67□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms