RNA–Protein interactions for RNA: ENST00000528280.1

CHD7-208, Transcript of chromodomain helicase DNA binding protein 7, humanhuman

TSL 2

Gene CHD7, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7-208ENST00000528280 PDXPQ96GD0 296 aa9.56□□□□□ -0.88
CHD7-208ENST00000528280 TEKT5Q96M29 485 aa9.56□□□□□ -0.88
CHD7-208ENST00000528280 GFM1Q96RP9 751 aaKnown RBP9.56□□□□□ -0.88
CHD7-208ENST00000528280 TMEM168Q9H0V1 697 aa9.56□□□□□ -0.88
CHD7-208ENST00000528280 RBSNQ9H1K0 784 aa9.56□□□□□ -0.88
CHD7-208ENST00000528280 ZFYVE1Q9HBF4 777 aa9.56□□□□□ -0.88
CHD7-208ENST00000528280 GLOD4Q9HC38 313 aa9.56□□□□□ -0.88
CHD7-208ENST00000528280 FGF22Q9HCT0 170 aa9.56□□□□□ -0.88
CHD7-208ENST00000528280 MRPL40Q9NQ50 206 aaKnown RBP9.56□□□□□ -0.88
CHD7-208ENST00000528280 THSD1Q9NS62 852 aa9.56□□□□□ -0.88
CHD7-208ENST00000528280 SEPT10Q9P0V9 454 aa9.56□□□□□ -0.88
CHD7-208ENST00000528280 SIRPGQ9P1W8 387 aa9.56□□□□□ -0.88
CHD7-208ENST00000528280 VPS18Q9P253 973 aa9.56□□□□□ -0.88
CHD7-208ENST00000528280 LRIT1Q9P2V4 623 aa9.56□□□□□ -0.88
CHD7-208ENST00000528280 PCDHGA8Q9Y5G5 932 aa9.56□□□□□ -0.88
CHD7-208ENST00000528280 PCDHA3Q9Y5H8 950 aa9.56□□□□□ -0.88
CHD7-208ENST00000528280 USP9XQ93008 2570 aaPredicted RBP9.56□□□□□ -0.88
CHD7-208ENST00000528280 LRRK1Q38SD2 2015 aa9.55□□□□□ -0.88
CHD7-208ENST00000528280 RHPN2P1A8MT19 583 aa9.55□□□□□ -0.88
CHD7-208ENST00000528280 GPR89AB7ZAQ6 455 aa9.55□□□□□ -0.88
CHD7-208ENST00000528280 NTN3O00634 580 aaPredicted RBP9.55□□□□□ -0.88
CHD7-208ENST00000528280 ATXN7O15265 892 aaPredicted RBP9.55□□□□□ -0.88
CHD7-208ENST00000528280 BRINP1O60477 761 aa9.55□□□□□ -0.88
CHD7-208ENST00000528280 ASMTLO95671 621 aa9.55□□□□□ -0.88
CHD7-208ENST00000528280 NDST3O95803 873 aa9.55□□□□□ -0.88
CHD7-208ENST00000528280 MMP2P08253 660 aa9.55□□□□□ -0.88
CHD7-208ENST00000528280 GPR89BP0CG08 455 aa9.55□□□□□ -0.88
CHD7-208ENST00000528280 FECHP22830 423 aa9.55□□□□□ -0.88
CHD7-208ENST00000528280 GPR3P46089 330 aa9.55□□□□□ -0.88
CHD7-208ENST00000528280 GNPDA1P46926 289 aa9.55□□□□□ -0.88
CHD7-208ENST00000528280 DYNLT1P63172 113 aa9.55□□□□□ -0.88
CHD7-208ENST00000528280 PRKD1Q15139 912 aaPredicted RBP9.55□□□□□ -0.88
CHD7-208ENST00000528280 TBC1D25Q3MII6 688 aa9.55□□□□□ -0.88
CHD7-208ENST00000528280 PERM1Q5SV97 790 aa9.55□□□□□ -0.88
CHD7-208ENST00000528280 CERCAMQ5T4B2 595 aa9.55□□□□□ -0.88
CHD7-208ENST00000528280 CCDC181Q5TID7 509 aa9.55□□□□□ -0.88
CHD7-208ENST00000528280 KAZNQ674X7 775 aa9.55□□□□□ -0.88
CHD7-208ENST00000528280 PID1Q7Z2X4 250 aa9.55□□□□□ -0.88
CHD7-208ENST00000528280 GALNT13Q8IUC8 556 aa9.55□□□□□ -0.88
CHD7-208ENST00000528280 SYCE1Q8N0S2 351 aa9.55□□□□□ -0.88
CHD7-208ENST00000528280 ZNF248Q8NDW4 579 aa9.55□□□□□ -0.88
CHD7-208ENST00000528280 ZDHHC1Q8WTX9 485 aa9.55□□□□□ -0.88
CHD7-208ENST00000528280 CCDC74AQ96AQ1 378 aa9.55□□□□□ -0.88
CHD7-208ENST00000528280 TADA1Q96BN2 335 aa9.55□□□□□ -0.88
CHD7-208ENST00000528280 LRRC45Q96CN5 670 aa9.55□□□□□ -0.88
CHD7-208ENST00000528280 HAUS1Q96CS2 278 aa9.55□□□□□ -0.88
CHD7-208ENST00000528280 PPP1R2P1Q96PQ5 205 aa9.55□□□□□ -0.88
CHD7-208ENST00000528280 BAG1Q99933 345 aaPredicted RBP9.55□□□□□ -0.88
CHD7-208ENST00000528280 DPYSL5Q9BPU6 564 aa9.55□□□□□ -0.88
CHD7-208ENST00000528280 RIOK2Q9BVS4 552 aaKnown RBP9.55□□□□□ -0.88
CHD7-208ENST00000528280 DPH1Q9BZG8 443 aa9.55□□□□□ -0.88
CHD7-208ENST00000528280 GPR63Q9BZJ6 419 aa9.55□□□□□ -0.88
CHD7-208ENST00000528280 LRRN3Q9H3W5 708 aa9.55□□□□□ -0.88
CHD7-208ENST00000528280 TRABDQ9H4I3 376 aa9.55□□□□□ -0.88
CHD7-208ENST00000528280 HACD3Q9P035 362 aa9.55□□□□□ -0.88
CHD7-208ENST00000528280 AKAP7Q9P0M2 348 aaPredicted RBP9.55□□□□□ -0.88
CHD7-208ENST00000528280 FAM153AQ9UHL3 310 aa9.55□□□□□ -0.88
CHD7-208ENST00000528280 SUFUQ9UMX1 484 aa9.55□□□□□ -0.88
CHD7-208ENST00000528280 CCDC187A0A096LP49 1063 aa9.54□□□□□ -0.88
CHD7-208ENST00000528280 J3QKU1 62 aa9.54□□□□□ -0.88
CHD7-208ENST00000528280 PJA2O43164 708 aa9.54□□□□□ -0.88
CHD7-208ENST00000528280 STK10O94804 968 aaKnown RBP9.54□□□□□ -0.88
CHD7-208ENST00000528280 TJP3O95049 919 aa9.54□□□□□ -0.88
CHD7-208ENST00000528280 FGF1P05230 155 aa9.54□□□□□ -0.88
CHD7-208ENST00000528280 CELA2BP08218 269 aaPredicted RBP9.54□□□□□ -0.88
CHD7-208ENST00000528280 SLC2A4P14672 509 aa9.54□□□□□ -0.88
CHD7-208ENST00000528280 CTNNA1P35221 906 aaKnown RBP9.54□□□□□ -0.88
CHD7-208ENST00000528280 ADCY8P40145 1251 aa9.54□□□□□ -0.88
CHD7-208ENST00000528280 ABCG1P45844 678 aa9.54□□□□□ -0.88
CHD7-208ENST00000528280 UCNP55089 124 aa9.54□□□□□ -0.88
CHD7-208ENST00000528280 CLDN6P56747 220 aa9.54□□□□□ -0.88
CHD7-208ENST00000528280 RWDD2BP57060 319 aa9.54□□□□□ -0.88
CHD7-208ENST00000528280 PCBP4P57723 403 aaKnown RBP9.54□□□□□ -0.88
CHD7-208ENST00000528280 DCDC1P59894 354 aa9.54□□□□□ -0.88
CHD7-208ENST00000528280 GABREP78334 506 aa9.54□□□□□ -0.88
CHD7-208ENST00000528280 CCL7P80098 99 aa9.54□□□□□ -0.88
CHD7-208ENST00000528280 CTBSQ01459 385 aa9.54□□□□□ -0.88
CHD7-208ENST00000528280 KIF5AQ12840 1032 aa9.54□□□□□ -0.88
CHD7-208ENST00000528280 ZBTB17Q13105 803 aa9.54□□□□□ -0.88
CHD7-208ENST00000528280 HLTFQ14527 1009 aaKnown RBP eCLIP9.54□□□□□ -0.88
CHD7-208ENST00000528280 IHHQ14623 411 aa9.54□□□□□ -0.88
CHD7-208ENST00000528280 PYCR3Q53H96 274 aa9.54□□□□□ -0.88
CHD7-208ENST00000528280 BROXQ5VW32 411 aa9.54□□□□□ -0.88
CHD7-208ENST00000528280 NPNTQ6UXI9 565 aa9.54□□□□□ -0.88
CHD7-208ENST00000528280 BBS12Q6ZW61 710 aa9.54□□□□□ -0.88
CHD7-208ENST00000528280 TMC3Q7Z5M5 1100 aa9.54□□□□□ -0.88
CHD7-208ENST00000528280 KIAA1328Q86T90 577 aa9.54□□□□□ -0.88
CHD7-208ENST00000528280 PIM3Q86V86 326 aa9.54□□□□□ -0.88
CHD7-208ENST00000528280 C17orf82Q86X59 251 aaPredicted RBP9.54□□□□□ -0.88
CHD7-208ENST00000528280 CCNJLQ8IV13 435 aa9.54□□□□□ -0.88
CHD7-208ENST00000528280 ZNF843Q8N446 348 aa9.54□□□□□ -0.88
CHD7-208ENST00000528280 AVL9Q8NBF6 648 aa9.54□□□□□ -0.88
CHD7-208ENST00000528280 KYQ8NBH2 561 aa9.54□□□□□ -0.88
CHD7-208ENST00000528280 LSM14AQ8ND56 463 aaKnown RBP9.54□□□□□ -0.88
CHD7-208ENST00000528280 DTX3LQ8TDB6 740 aa9.54□□□□□ -0.88
CHD7-208ENST00000528280 HTR3CQ8WXA8 447 aa9.54□□□□□ -0.88
CHD7-208ENST00000528280 SCAMP4Q969E2 229 aa9.54□□□□□ -0.88
CHD7-208ENST00000528280 SH3KBP1Q96B97 665 aa9.54□□□□□ -0.88
CHD7-208ENST00000528280 LIN37Q96GY3 246 aaPredicted RBP9.54□□□□□ -0.88
CHD7-208ENST00000528280 CRELD1Q96HD1 420 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms