RNA–Protein interactions for RNA: ENST00000527949.1

NR1H3-230, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 2 BASIC

Gene NR1H3, Length 1,065 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-230ENST00000527949 PCDH9Q9HC56 1237 aa11.08□□□□□ -0.64
NR1H3-230ENST00000527949 CYP4F12Q9HCS2 524 aa11.08□□□□□ -0.64
NR1H3-230ENST00000527949 VPS18Q9P253 973 aa11.08□□□□□ -0.64
NR1H3-230ENST00000527949 CHKBQ9Y259 395 aa11.08□□□□□ -0.64
NR1H3-230ENST00000527949 PCDHGA7Q9Y5G6 932 aa11.08□□□□□ -0.64
NR1H3-230ENST00000527949 ENTPD2Q9Y5L3 495 aa11.08□□□□□ -0.64
NR1H3-230ENST00000527949 COL6A6A6NMZ7 2263 aa11.08□□□□□ -0.64
NR1H3-230ENST00000527949 ZFC3H1O60293 1989 aaKnown RBP11.07□□□□□ -0.64
NR1H3-230ENST00000527949 CYSRT1A8MQ03 144 aa11.07□□□□□ -0.64
NR1H3-230ENST00000527949 A8MX80 341 aa11.07□□□□□ -0.64
NR1H3-230ENST00000527949 ANKRD66B4E2M5 251 aa11.07□□□□□ -0.64
NR1H3-230ENST00000527949 D6RAR5 112 aa11.07□□□□□ -0.64
NR1H3-230ENST00000527949 ZW10O43264 779 aa11.07□□□□□ -0.64
NR1H3-230ENST00000527949 TNFSF15O95150 251 aa11.07□□□□□ -0.64
NR1H3-230ENST00000527949 JCHAINP01591 159 aa11.07□□□□□ -0.64
NR1H3-230ENST00000527949 KRT1P04264 644 aa11.07□□□□□ -0.64
NR1H3-230ENST00000527949 COMTP21964 271 aa11.07□□□□□ -0.64
NR1H3-230ENST00000527949 CYLC1P35663 651 aaPredicted RBP11.07□□□□□ -0.64
NR1H3-230ENST00000527949 CDKN2BP42772 138 aa11.07□□□□□ -0.64
NR1H3-230ENST00000527949 MAGEA1P43355 309 aa11.07□□□□□ -0.64
NR1H3-230ENST00000527949 GPR1P46091 355 aa11.07□□□□□ -0.64
NR1H3-230ENST00000527949 DCDC1P59894 354 aa11.07□□□□□ -0.64
NR1H3-230ENST00000527949 SRSF1Q07955 248 aaKnown RBP eCLIP11.07□□□□□ -0.64
NR1H3-230ENST00000527949 ILF3Q12906 894 aaKnown RBP eCLIP11.07□□□□□ -0.64
NR1H3-230ENST00000527949 CLN3Q13286 438 aa11.07□□□□□ -0.64
NR1H3-230ENST00000527949 LRP8Q14114 963 aa11.07□□□□□ -0.64
NR1H3-230ENST00000527949 QPCTQ16769 361 aa11.07□□□□□ -0.64
NR1H3-230ENST00000527949 RAET1GQ6H3X3 334 aa11.07□□□□□ -0.64
NR1H3-230ENST00000527949 USP53Q70EK8 1073 aa11.07□□□□□ -0.64
NR1H3-230ENST00000527949 RD3Q7Z3Z2 195 aa11.07□□□□□ -0.64
NR1H3-230ENST00000527949 KATNAL2Q8IYT4 538 aa11.07□□□□□ -0.64
NR1H3-230ENST00000527949 ZSCAN1Q8NBB4 408 aa11.07□□□□□ -0.64
NR1H3-230ENST00000527949 FAM46DQ8NEK8 389 aa11.07□□□□□ -0.64
NR1H3-230ENST00000527949 EXD1Q8NHP7 514 aa11.07□□□□□ -0.64
NR1H3-230ENST00000527949 CCDC74AQ96AQ1 378 aa11.07□□□□□ -0.64
NR1H3-230ENST00000527949 TMEM159Q96B96 161 aa11.07□□□□□ -0.64
NR1H3-230ENST00000527949 AP2M1Q96CW1 435 aa11.07□□□□□ -0.64
NR1H3-230ENST00000527949 SGF29Q96ES7 293 aa11.07□□□□□ -0.64
NR1H3-230ENST00000527949 TMEM74Q96NL1 305 aa11.07□□□□□ -0.64
NR1H3-230ENST00000527949 TRIB3Q96RU7 358 aa11.07□□□□□ -0.64
NR1H3-230ENST00000527949 MLPHQ9BV36 600 aaPredicted RBP11.07□□□□□ -0.64
NR1H3-230ENST00000527949 B3GNT4Q9C0J1 378 aa11.07□□□□□ -0.64
NR1H3-230ENST00000527949 STRADBQ9C0K7 418 aa11.07□□□□□ -0.64
NR1H3-230ENST00000527949 RMI1Q9H9A7 625 aa11.07□□□□□ -0.64
NR1H3-230ENST00000527949 CARS2Q9HA77 564 aaKnown RBP11.07□□□□□ -0.64
NR1H3-230ENST00000527949 RAD18Q9NS91 495 aa11.07□□□□□ -0.64
NR1H3-230ENST00000527949 STARD5Q9NSY2 213 aa11.07□□□□□ -0.64
NR1H3-230ENST00000527949 SEPT10Q9P0V9 454 aa11.07□□□□□ -0.64
NR1H3-230ENST00000527949 GULP1Q9UBP9 304 aa11.07□□□□□ -0.64
NR1H3-230ENST00000527949 ACSL6Q9UKU0 697 aa11.07□□□□□ -0.64
NR1H3-230ENST00000527949 ATMQ13315 3056 aa11.07□□□□□ -0.64
NR1H3-230ENST00000527949 MGAQ8IWI9 3026 aa11.06□□□□□ -0.64
NR1H3-230ENST00000527949 NAV2Q8IVL1 2488 aa11.06□□□□□ -0.64
NR1H3-230ENST00000527949 BTNL10A8MVZ5 291 aa11.06□□□□□ -0.64
NR1H3-230ENST00000527949 KCNK1O00180 336 aa11.06□□□□□ -0.64
NR1H3-230ENST00000527949 TERTO14746 1132 aaKnown RBP11.06□□□□□ -0.64
NR1H3-230ENST00000527949 SPOPO43791 374 aa11.06□□□□□ -0.64
NR1H3-230ENST00000527949 MAP3K6O95382 1288 aa11.06□□□□□ -0.64
NR1H3-230ENST00000527949 FUCA1P04066 466 aa11.06□□□□□ -0.64
NR1H3-230ENST00000527949 CTPS1P17812 591 aa11.06□□□□□ -0.64
NR1H3-230ENST00000527949 GPR3P46089 330 aa11.06□□□□□ -0.64
NR1H3-230ENST00000527949 SPINT3P49223 89 aa11.06□□□□□ -0.64
NR1H3-230ENST00000527949 PDX1P52945 283 aa11.06□□□□□ -0.64
NR1H3-230ENST00000527949 ZBTB17Q13105 803 aa11.06□□□□□ -0.64
NR1H3-230ENST00000527949 SQSTM1Q13501 440 aa11.06□□□□□ -0.64
NR1H3-230ENST00000527949 PRKD1Q15139 912 aaPredicted RBP11.06□□□□□ -0.64
NR1H3-230ENST00000527949 SPA17Q15506 151 aa11.06□□□□□ -0.64
NR1H3-230ENST00000527949 PPP2R5EQ16537 467 aa11.06□□□□□ -0.64
NR1H3-230ENST00000527949 TEX44Q53QW1 395 aa11.06□□□□□ -0.64
NR1H3-230ENST00000527949 ODF2Q5BJF6 829 aa11.06□□□□□ -0.64
NR1H3-230ENST00000527949 TFDP3Q5H9I0 405 aa11.06□□□□□ -0.64
NR1H3-230ENST00000527949 HENMT1Q5T8I9 393 aaKnown RBP11.06□□□□□ -0.64
NR1H3-230ENST00000527949 PDPK2PQ6A1A2 396 aa11.06□□□□□ -0.64
NR1H3-230ENST00000527949 MFSD7Q6UXD7 560 aa11.06□□□□□ -0.64
NR1H3-230ENST00000527949 NT5DC3Q86UY8 548 aa11.06□□□□□ -0.64
NR1H3-230ENST00000527949 NRROSQ86YC3 692 aa11.06□□□□□ -0.64
NR1H3-230ENST00000527949 CCNJLQ8IV13 435 aa11.06□□□□□ -0.64
NR1H3-230ENST00000527949 RCOR2Q8IZ40 523 aa11.06□□□□□ -0.64
NR1H3-230ENST00000527949 CCHCR1Q8TD31 782 aa11.06□□□□□ -0.64
NR1H3-230ENST00000527949 DTX3LQ8TDB6 740 aa11.06□□□□□ -0.64
NR1H3-230ENST00000527949 PRR11Q96HE9 360 aaPredicted RBP11.06□□□□□ -0.64
NR1H3-230ENST00000527949 GFM1Q96RP9 751 aaKnown RBP11.06□□□□□ -0.64
NR1H3-230ENST00000527949 VAT1Q99536 393 aa11.06□□□□□ -0.64
NR1H3-230ENST00000527949 LRRN3Q9H3W5 708 aa11.06□□□□□ -0.64
NR1H3-230ENST00000527949 MAGEE1Q9HCI5 957 aa11.06□□□□□ -0.64
NR1H3-230ENST00000527949 MRPL40Q9NQ50 206 aaKnown RBP11.06□□□□□ -0.64
NR1H3-230ENST00000527949 PKD2L2Q9NZM6 624 aa11.06□□□□□ -0.64
NR1H3-230ENST00000527949 SUFUQ9UMX1 484 aa11.06□□□□□ -0.64
NR1H3-230ENST00000527949 EFR3BQ9Y2G0 817 aa11.06□□□□□ -0.64
NR1H3-230ENST00000527949 HEY1Q9Y5J3 304 aa11.06□□□□□ -0.64
NR1H3-230ENST00000527949 ALG6Q9Y672 507 aa11.06□□□□□ -0.64
NR1H3-230ENST00000527949 SPTA1P02549 2419 aa11.06□□□□□ -0.64
NR1H3-230ENST00000527949 HECTD1Q9ULT8 2610 aa11.05□□□□□ -0.64
NR1H3-230ENST00000527949 A0A1W2PNU3 283 aaPredicted RBP11.05□□□□□ -0.64
NR1H3-230ENST00000527949 A0A1W2PQM1 296 aa11.05□□□□□ -0.64
NR1H3-230ENST00000527949 HACD1B0YJ81 288 aa11.05□□□□□ -0.64
NR1H3-230ENST00000527949 GPR89AB7ZAQ6 455 aa11.05□□□□□ -0.64
NR1H3-230ENST00000527949 PLD2O14939 933 aa11.05□□□□□ -0.64
NR1H3-230ENST00000527949 ZNF189O75820 626 aaPredicted RBP11.05□□□□□ -0.64
NR1H3-230ENST00000527949 ZRANB2O95218 330 aaKnown RBP eCLIP11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms