RNA–Protein interactions for RNA: ENST00000527916.1

CPSF1-203, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 506 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-203ENST00000527916 TSR1Q2NL82 804 aaKnown RBP10.51□□□□□ -0.73
CPSF1-203ENST00000527916 ASTE1Q2TB18 679 aaPredicted RBP10.51□□□□□ -0.73
CPSF1-203ENST00000527916 DEFB109BQ30KR1 87 aa10.51□□□□□ -0.73
CPSF1-203ENST00000527916 SPECC1LQ69YQ0 1117 aa10.51□□□□□ -0.73
CPSF1-203ENST00000527916 LIPIQ6XZB0 460 aa10.51□□□□□ -0.73
CPSF1-203ENST00000527916 H2AFVQ71UI9 128 aa10.51□□□□□ -0.73
CPSF1-203ENST00000527916 DPPA4Q7L190 304 aa10.51□□□□□ -0.73
CPSF1-203ENST00000527916 HEATR4Q86WZ0 1026 aa10.51□□□□□ -0.73
CPSF1-203ENST00000527916 TP53INP2Q8IXH6 220 aa10.51□□□□□ -0.73
CPSF1-203ENST00000527916 TEX26Q8N6G2 289 aa10.51□□□□□ -0.73
CPSF1-203ENST00000527916 EFCAB3Q8N7B9 438 aa10.51□□□□□ -0.73
CPSF1-203ENST00000527916 OR8K1Q8NGG5 319 aa10.51□□□□□ -0.73
CPSF1-203ENST00000527916 OR56A4Q8NGH8 313 aa10.51□□□□□ -0.73
CPSF1-203ENST00000527916 SSC4DQ8WTU2 575 aa10.51□□□□□ -0.73
CPSF1-203ENST00000527916 NSMCE1Q8WV22 266 aa10.51□□□□□ -0.73
CPSF1-203ENST00000527916 ART4Q93070 314 aa10.51□□□□□ -0.73
CPSF1-203ENST00000527916 FATE1Q969F0 183 aa10.51□□□□□ -0.73
CPSF1-203ENST00000527916 PDXPQ96GD0 296 aa10.51□□□□□ -0.73
CPSF1-203ENST00000527916 CCDC74BQ96LY2 380 aa10.51□□□□□ -0.73
CPSF1-203ENST00000527916 TEFMQ96QE5 360 aaKnown RBP10.51□□□□□ -0.73
CPSF1-203ENST00000527916 NUDCD1Q96RS6 583 aa10.51□□□□□ -0.73
CPSF1-203ENST00000527916 MGME1Q9BQP7 344 aa10.51□□□□□ -0.73
CPSF1-203ENST00000527916 NUDT22Q9BRQ3 303 aa10.51□□□□□ -0.73
CPSF1-203ENST00000527916 XPO4Q9C0E2 1151 aaKnown RBP10.51□□□□□ -0.73
CPSF1-203ENST00000527916 PRDM8Q9NQV8 689 aa10.51□□□□□ -0.73
CPSF1-203ENST00000527916 ETNK2Q9NVF9 386 aa10.51□□□□□ -0.73
CPSF1-203ENST00000527916 SLC39A1Q9NY26 324 aa10.51□□□□□ -0.73
CPSF1-203ENST00000527916 B3GALT1Q9Y5Z6 326 aa10.51□□□□□ -0.73
CPSF1-203ENST00000527916 FBN2P35556 2912 aa10.5□□□□□ -0.73
CPSF1-203ENST00000527916 MKRN2OSH3BPM6 223 aa10.5□□□□□ -0.73
CPSF1-203ENST00000527916 CACNB4O00305 520 aaPredicted RBP10.5□□□□□ -0.73
CPSF1-203ENST00000527916 B4GAT1O43505 415 aa10.5□□□□□ -0.73
CPSF1-203ENST00000527916 NFKBIAP25963 317 aa10.5□□□□□ -0.73
CPSF1-203ENST00000527916 MAN1A1P33908 653 aa10.5□□□□□ -0.73
CPSF1-203ENST00000527916 GPR3P46089 330 aa10.5□□□□□ -0.73
CPSF1-203ENST00000527916 ARSDP51689 593 aa10.5□□□□□ -0.73
CPSF1-203ENST00000527916 LIMK2P53671 638 aa10.5□□□□□ -0.73
CPSF1-203ENST00000527916 ZNF235Q14590 738 aa10.5□□□□□ -0.73
CPSF1-203ENST00000527916 PAFAH1B3Q15102 231 aaKnown RBP10.5□□□□□ -0.73
CPSF1-203ENST00000527916 PDK2Q15119 407 aa10.5□□□□□ -0.73
CPSF1-203ENST00000527916 MARC1Q5VT66 337 aa10.5□□□□□ -0.73
CPSF1-203ENST00000527916 FAM129CQ86XR2 697 aa10.5□□□□□ -0.73
CPSF1-203ENST00000527916 MAP7D3Q8IWC1 876 aa10.5□□□□□ -0.73
CPSF1-203ENST00000527916 NRSN1Q8IZ57 195 aa10.5□□□□□ -0.73
CPSF1-203ENST00000527916 NLGN4XQ8N0W4 816 aa10.5□□□□□ -0.73
CPSF1-203ENST00000527916 CBARPQ8N350 705 aaPredicted RBP10.5□□□□□ -0.73
CPSF1-203ENST00000527916 PGBD5Q8N414 524 aa10.5□□□□□ -0.73
CPSF1-203ENST00000527916 GALNT11Q8NCW6 608 aa10.5□□□□□ -0.73
CPSF1-203ENST00000527916 NLGN4YQ8NFZ3 816 aaPredicted RBP10.5□□□□□ -0.73
CPSF1-203ENST00000527916 OR4D9Q8NGE8 314 aa10.5□□□□□ -0.73
CPSF1-203ENST00000527916 BTBD6Q96KE9 485 aa10.5□□□□□ -0.73
CPSF1-203ENST00000527916 NSMCE3Q96MG7 304 aa10.5□□□□□ -0.73
CPSF1-203ENST00000527916 DNAJC7Q99615 494 aa10.5□□□□□ -0.73
CPSF1-203ENST00000527916 DPYSL5Q9BPU6 564 aa10.5□□□□□ -0.73
CPSF1-203ENST00000527916 CUEDC1Q9NWM3 386 aaPredicted RBP10.5□□□□□ -0.73
CPSF1-203ENST00000527916 AMACRQ9UHK6 382 aa10.5□□□□□ -0.73
CPSF1-203ENST00000527916 PHTF1Q9UMS5 762 aa10.5□□□□□ -0.73
CPSF1-203ENST00000527916 COQ6Q9Y2Z9 468 aa10.5□□□□□ -0.73
CPSF1-203ENST00000527916 PPIL1Q9Y3C6 166 aa10.5□□□□□ -0.73
CPSF1-203ENST00000527916 KCTD3Q9Y597 815 aa10.5□□□□□ -0.73
CPSF1-203ENST00000527916 MED13Q9UHV7 2174 aa10.5□□□□□ -0.73
CPSF1-203ENST00000527916 HIVEP3Q5T1R4 2406 aa10.49□□□□□ -0.73
CPSF1-203ENST00000527916 B4E171 279 aa10.49□□□□□ -0.73
CPSF1-203ENST00000527916 TNFRSF10CO14798 259 aa10.49□□□□□ -0.73
CPSF1-203ENST00000527916 RECQL5O94762 991 aaPredicted RBP10.49□□□□□ -0.73
CPSF1-203ENST00000527916 PROSCO94903 275 aa10.49□□□□□ -0.73
CPSF1-203ENST00000527916 PCCBP05166 539 aa10.49□□□□□ -0.73
CPSF1-203ENST00000527916 ELFN1P0C7U0 828 aa10.49□□□□□ -0.73
CPSF1-203ENST00000527916 TCN2P20062 427 aa10.49□□□□□ -0.73
CPSF1-203ENST00000527916 CES1P23141 567 aa10.49□□□□□ -0.73
CPSF1-203ENST00000527916 TSPAN7P41732 249 aa10.49□□□□□ -0.73
CPSF1-203ENST00000527916 MMP13P45452 471 aa10.49□□□□□ -0.73
CPSF1-203ENST00000527916 KIAA1024LP59773 190 aa10.49□□□□□ -0.73
CPSF1-203ENST00000527916 PEX6Q13608 980 aa10.49□□□□□ -0.73
CPSF1-203ENST00000527916 KRT81Q14533 505 aa10.49□□□□□ -0.73
CPSF1-203ENST00000527916 CRTC2Q53ET0 693 aaPredicted RBP10.49□□□□□ -0.73
CPSF1-203ENST00000527916 TIGD7Q6NT04 549 aaPredicted RBP10.49□□□□□ -0.73
CPSF1-203ENST00000527916 TCTN3Q6NUS6 607 aa10.49□□□□□ -0.73
CPSF1-203ENST00000527916 KDELC2Q7Z4H8 507 aa10.49□□□□□ -0.73
CPSF1-203ENST00000527916 ZNF438Q7Z4V0 828 aa10.49□□□□□ -0.73
CPSF1-203ENST00000527916 ATPAF2Q8N5M1 289 aa10.49□□□□□ -0.73
CPSF1-203ENST00000527916 CTNNBL1Q8WYA6 563 aaPredicted RBP10.49□□□□□ -0.73
CPSF1-203ENST00000527916 OR1E3Q8WZA6 343 aa10.49□□□□□ -0.73
CPSF1-203ENST00000527916 MAML1Q92585 1016 aa10.49□□□□□ -0.73
CPSF1-203ENST00000527916 PMEPA1Q969W9 287 aa10.49□□□□□ -0.73
CPSF1-203ENST00000527916 FAF2Q96CS3 445 aa10.49□□□□□ -0.73
CPSF1-203ENST00000527916 SCRN2Q96FV2 425 aa10.49□□□□□ -0.73
CPSF1-203ENST00000527916 TSGA13Q96PP4 275 aa10.49□□□□□ -0.73
CPSF1-203ENST00000527916 ZNF670Q9BS34 389 aa10.49□□□□□ -0.73
CPSF1-203ENST00000527916 ZPBPQ9BS86 351 aa10.49□□□□□ -0.73
CPSF1-203ENST00000527916 ZMYND15Q9H091 742 aa10.49□□□□□ -0.73
CPSF1-203ENST00000527916 TMEM168Q9H0V1 697 aa10.49□□□□□ -0.73
CPSF1-203ENST00000527916 TRIT1Q9H3H1 467 aaKnown RBP10.49□□□□□ -0.73
CPSF1-203ENST00000527916 ZNHIT6Q9NWK9 470 aaKnown RBP10.49□□□□□ -0.73
CPSF1-203ENST00000527916 CTTNBP2NLQ9P2B4 639 aa10.49□□□□□ -0.73
CPSF1-203ENST00000527916 PILRAQ9UKJ1 303 aa10.49□□□□□ -0.73
CPSF1-203ENST00000527916 TP53TG5Q9Y2B4 290 aa10.49□□□□□ -0.73
CPSF1-203ENST00000527916 TMEM202A6NGA9 273 aa10.48□□□□□ -0.73
CPSF1-203ENST00000527916 ZNF487B1APH4 448 aa10.48□□□□□ -0.73
CPSF1-203ENST00000527916 PSMD11O00231 422 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms