RNA–Protein interactions for RNA: ENST00000527881.1

TSKU-203, Transcript of tsukushi, small leucine rich proteoglycan, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TSKU, Length 3,554 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSKU-203ENST00000527881 PXMP2Q9NR77 195 aa12.46□□□□□ -0.41
TSKU-203ENST00000527881 TRMT13Q9NUP7 481 aaKnown RBP12.46□□□□□ -0.41
TSKU-203ENST00000527881 PAK1IP1Q9NWT1 392 aaPredicted RBP12.46□□□□□ -0.41
TSKU-203ENST00000527881 FBXO9Q9UK97 447 aaPredicted RBP12.46□□□□□ -0.41
TSKU-203ENST00000527881 PMF1-BGLAPU3KQ54 211 aa12.46□□□□□ -0.41
TSKU-203ENST00000527881 AREL1O15033 823 aa12.46□□□□□ -0.41
TSKU-203ENST00000527881 MTSS1O43312 755 aa12.46□□□□□ -0.41
TSKU-203ENST00000527881 NR3C2P08235 984 aa12.46□□□□□ -0.41
TSKU-203ENST00000527881 TCF3P15923 654 aa12.46□□□□□ -0.41
TSKU-203ENST00000527881 KCNA5P22460 613 aa12.46□□□□□ -0.41
TSKU-203ENST00000527881 ARCN1P48444 511 aaKnown RBP12.46□□□□□ -0.41
TSKU-203ENST00000527881 BAATQ14032 418 aaPredicted RBP12.46□□□□□ -0.41
TSKU-203ENST00000527881 TRIP4Q15650 581 aaPredicted RBP12.46□□□□□ -0.41
TSKU-203ENST00000527881 PSMD5Q16401 504 aa12.46□□□□□ -0.41
TSKU-203ENST00000527881 UGP2Q16851 508 aa12.46□□□□□ -0.41
TSKU-203ENST00000527881 SLC26A9Q7LBE3 791 aa12.46□□□□□ -0.41
TSKU-203ENST00000527881 TMEM135Q86UB9 458 aa12.46□□□□□ -0.41
TSKU-203ENST00000527881 ITFG1Q8TB96 612 aa12.46□□□□□ -0.41
TSKU-203ENST00000527881 CNIH3Q8TBE1 160 aa12.46□□□□□ -0.41
TSKU-203ENST00000527881 IDI2Q9BXS1 227 aa12.46□□□□□ -0.41
TSKU-203ENST00000527881 FBXO8Q9NRD0 319 aa12.46□□□□□ -0.41
TSKU-203ENST00000527881 BTRCQ9Y297 605 aa12.46□□□□□ -0.41
TSKU-203ENST00000527881 IPO13O94829 963 aaKnown RBP12.46□□□□□ -0.42
TSKU-203ENST00000527881 PRKCBP05771 671 aa12.46□□□□□ -0.42
TSKU-203ENST00000527881 HTR1AP08908 422 aa12.46□□□□□ -0.42
TSKU-203ENST00000527881 ALDOCP09972 364 aaKnown RBP12.46□□□□□ -0.42
TSKU-203ENST00000527881 FMO3P31513 532 aa12.46□□□□□ -0.42
TSKU-203ENST00000527881 EMX1Q04741 257 aaPredicted RBP12.46□□□□□ -0.42
TSKU-203ENST00000527881 KCNAB2Q13303 367 aa12.46□□□□□ -0.42
TSKU-203ENST00000527881 LAPTM5Q13571 262 aa12.46□□□□□ -0.42
TSKU-203ENST00000527881 CAPSQ13938 189 aa12.46□□□□□ -0.42
TSKU-203ENST00000527881 DPYSL2Q16555 572 aa12.46□□□□□ -0.42
TSKU-203ENST00000527881 DPY19L1Q2PZI1 675 aa12.46□□□□□ -0.42
TSKU-203ENST00000527881 TJAP1Q5JTD0 557 aa12.46□□□□□ -0.42
TSKU-203ENST00000527881 ATAD3CQ5T2N8 411 aa12.46□□□□□ -0.42
TSKU-203ENST00000527881 RNF149Q8NC42 400 aa12.46□□□□□ -0.42
TSKU-203ENST00000527881 RDM1Q8NG50 284 aa12.46□□□□□ -0.42
TSKU-203ENST00000527881 FBXO30Q8TB52 745 aa12.46□□□□□ -0.42
TSKU-203ENST00000527881 FAR1Q8WVX9 515 aa12.46□□□□□ -0.42
TSKU-203ENST00000527881 C3orf30Q96M34 536 aa12.46□□□□□ -0.42
TSKU-203ENST00000527881 ENTPD7Q9NQZ7 604 aa12.46□□□□□ -0.42
TSKU-203ENST00000527881 TMPRSS4Q9NRS4 437 aa12.46□□□□□ -0.42
TSKU-203ENST00000527881 FAM118AQ9NWS6 357 aa12.46□□□□□ -0.42
TSKU-203ENST00000527881 EVLQ9UI08 416 aaPredicted RBP12.46□□□□□ -0.42
TSKU-203ENST00000527881 ISPDA4D126 451 aa12.45□□□□□ -0.42
TSKU-203ENST00000527881 SLC1A7O00341 560 aa12.45□□□□□ -0.42
TSKU-203ENST00000527881 CILPO75339 1184 aa12.45□□□□□ -0.42
TSKU-203ENST00000527881 HGFP14210 728 aa12.45□□□□□ -0.42
TSKU-203ENST00000527881 FAM98BQ52LJ0 330 aaKnown RBP12.45□□□□□ -0.42
TSKU-203ENST00000527881 STRADAQ7RTN6 431 aa12.45□□□□□ -0.42
TSKU-203ENST00000527881 ACOT1Q86TX2 421 aa12.45□□□□□ -0.42
TSKU-203ENST00000527881 CDAN1Q8IWY9 1227 aa12.45□□□□□ -0.42
TSKU-203ENST00000527881 CLEC4CQ8WTT0 213 aa12.45□□□□□ -0.42
TSKU-203ENST00000527881 ERVK-18Q9QC07 812 aa12.45□□□□□ -0.42
TSKU-203ENST00000527881 CRNNQ9UBG3 495 aaPredicted RBP12.45□□□□□ -0.42
TSKU-203ENST00000527881 AASSQ9UDR5 926 aa12.45□□□□□ -0.42
TSKU-203ENST00000527881 WBP11Q9Y2W2 641 aaKnown RBP12.45□□□□□ -0.42
TSKU-203ENST00000527881 U3KQV3 271 aa12.45□□□□□ -0.42
TSKU-203ENST00000527881 TTC24A2A3L6 582 aaPredicted RBP12.45□□□□□ -0.42
TSKU-203ENST00000527881 CCDC154A6NI56 674 aa12.45□□□□□ -0.42
TSKU-203ENST00000527881 SAGE2PA6NJ88 616 aa12.45□□□□□ -0.42
TSKU-203ENST00000527881 UNCXA6NJT0 531 aa12.45□□□□□ -0.42
TSKU-203ENST00000527881 GSTA4O15217 222 aa12.45□□□□□ -0.42
TSKU-203ENST00000527881 GABARAPO95166 117 aa12.45□□□□□ -0.42
TSKU-203ENST00000527881 CD4P01730 458 aa12.45□□□□□ -0.42
TSKU-203ENST00000527881 NFICP08651 508 aa12.45□□□□□ -0.42
TSKU-203ENST00000527881 PRKACGP22612 351 aa12.45□□□□□ -0.42
TSKU-203ENST00000527881 DAB2P98082 770 aa12.45□□□□□ -0.42
TSKU-203ENST00000527881 CDC20Q12834 499 aa12.45□□□□□ -0.42
TSKU-203ENST00000527881 MAP1SQ66K74 1059 aaPredicted RBP12.45□□□□□ -0.42
TSKU-203ENST00000527881 ZNF470Q6ECI4 717 aa12.45□□□□□ -0.42
TSKU-203ENST00000527881 GLYATQ6IB77 296 aa12.45□□□□□ -0.42
TSKU-203ENST00000527881 ZBTB8OSQ8IWT0 167 aa12.45□□□□□ -0.42
TSKU-203ENST00000527881 REM2Q8IYK8 340 aaPredicted RBP12.45□□□□□ -0.42
TSKU-203ENST00000527881 NATD1Q8N6N6 113 aa12.45□□□□□ -0.42
TSKU-203ENST00000527881 TTC16Q8NEE8 873 aa12.45□□□□□ -0.42
TSKU-203ENST00000527881 LGALS12Q96DT0 336 aa12.45□□□□□ -0.42
TSKU-203ENST00000527881 CCDC177Q9NQR7 707 aaPredicted RBP12.45□□□□□ -0.42
TSKU-203ENST00000527881 ZNF302Q9NR11 478 aa12.45□□□□□ -0.42
TSKU-203ENST00000527881 PDLIM7Q9NR12 457 aa12.45□□□□□ -0.42
TSKU-203ENST00000527881 PLSCR3Q9NRY6 295 aa12.45□□□□□ -0.42
TSKU-203ENST00000527881 SYNPO2Q9UMS6 1093 aa12.45□□□□□ -0.42
TSKU-203ENST00000527881 A8MT66 165 aa12.45□□□□□ -0.42
TSKU-203ENST00000527881 TTC34A8MYJ7 566 aa12.45□□□□□ -0.42
TSKU-203ENST00000527881 TFECO14948 347 aaPredicted RBP12.45□□□□□ -0.42
TSKU-203ENST00000527881 AP2A1O95782 977 aa12.45□□□□□ -0.42
TSKU-203ENST00000527881 ANGPTL1O95841 491 aa12.45□□□□□ -0.42
TSKU-203ENST00000527881 FTH1P02794 183 aa12.45□□□□□ -0.42
TSKU-203ENST00000527881 NTRK1P04629 796 aa12.45□□□□□ -0.42
TSKU-203ENST00000527881 HOXC6P09630 235 aa12.45□□□□□ -0.42
TSKU-203ENST00000527881 CYP4B1P13584 511 aa12.45□□□□□ -0.42
TSKU-203ENST00000527881 GPX3P22352 226 aa12.45□□□□□ -0.42
TSKU-203ENST00000527881 GRK3P35626 688 aa12.45□□□□□ -0.42
TSKU-203ENST00000527881 CAP2P40123 477 aa12.45□□□□□ -0.42
TSKU-203ENST00000527881 TUBA1BP68363 451 aa12.45□□□□□ -0.42
TSKU-203ENST00000527881 CTU2Q2VPK5 515 aaKnown RBP12.45□□□□□ -0.42
TSKU-203ENST00000527881 IRAK1BP1Q5VVH5 260 aa12.45□□□□□ -0.42
TSKU-203ENST00000527881 ZNF544Q6NX49 715 aa12.45□□□□□ -0.42
TSKU-203ENST00000527881 TUBA1AQ71U36 451 aa12.45□□□□□ -0.42
TSKU-203ENST00000527881 OR8H2Q8N162 312 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms