RNA–Protein interactions for RNA: ENST00000526627.1

SMIM3-201, Transcript of small integral membrane protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMIM3, Length 2,332 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM3-201ENST00000526627 ATF6P18850 670 aa20.3■□□□□ 0.84
SMIM3-201ENST00000526627 CR2P20023 1033 aa20.3■□□□□ 0.84
SMIM3-201ENST00000526627 EEF1DP29692 281 aaKnown RBP20.3■□□□□ 0.84
SMIM3-201ENST00000526627 TM4SF4P48230 202 aa20.3■□□□□ 0.84
SMIM3-201ENST00000526627 YBX1P67809 324 aaKnown RBP20.3■□□□□ 0.84
SMIM3-201ENST00000526627 CLCQ05315 142 aa20.3■□□□□ 0.84
SMIM3-201ENST00000526627 IKBKEQ14164 716 aa20.3■□□□□ 0.84
SMIM3-201ENST00000526627 RTP2Q5QGT7 225 aa20.3■□□□□ 0.84
SMIM3-201ENST00000526627 CHERPQ8IWX8 916 aaKnown RBP20.3■□□□□ 0.84
SMIM3-201ENST00000526627 OR4K2Q8NGD2 314 aa20.3■□□□□ 0.84
SMIM3-201ENST00000526627 SH3GL3Q99963 347 aa20.3■□□□□ 0.84
SMIM3-201ENST00000526627 ZBED2Q9BTP6 218 aa20.3■□□□□ 0.84
SMIM3-201ENST00000526627 SLC52A3Q9NQ40 469 aa20.3■□□□□ 0.84
SMIM3-201ENST00000526627 GALPQ9UBC7 116 aa20.3■□□□□ 0.84
SMIM3-201ENST00000526627 ABCD2Q9UBJ2 740 aa20.3■□□□□ 0.84
SMIM3-201ENST00000526627 SEPT3Q9UH03 358 aa20.3■□□□□ 0.84
SMIM3-201ENST00000526627 CNOT6Q9ULM6 557 aaKnown RBP20.3■□□□□ 0.84
SMIM3-201ENST00000526627 FAM50BQ9Y247 325 aa20.3■□□□□ 0.84
SMIM3-201ENST00000526627 ZFP37Q9Y6Q3 630 aaPredicted RBP20.3■□□□□ 0.84
SMIM3-201ENST00000526627 LCHNA4D1U4 455 aa20.29■□□□□ 0.84
SMIM3-201ENST00000526627 FXYD1O00168 92 aa20.29■□□□□ 0.84
SMIM3-201ENST00000526627 NME4O00746 187 aa20.29■□□□□ 0.84
SMIM3-201ENST00000526627 TNFAIP8O95379 198 aa20.29■□□□□ 0.84
SMIM3-201ENST00000526627 ATP6V1B2P21281 511 aa20.29■□□□□ 0.84
SMIM3-201ENST00000526627 RPL5P46777 297 aaKnown RBP20.29■□□□□ 0.84
SMIM3-201ENST00000526627 CDKN1CP49918 316 aaPredicted RBP20.29■□□□□ 0.84
SMIM3-201ENST00000526627 KPNA1P52294 538 aaPredicted RBP20.29■□□□□ 0.84
SMIM3-201ENST00000526627 APOFQ13790 326 aa20.29■□□□□ 0.84
SMIM3-201ENST00000526627 NRF1Q16656 503 aa20.29■□□□□ 0.84
SMIM3-201ENST00000526627 VPS26BQ4G0F5 336 aa20.29■□□□□ 0.84
SMIM3-201ENST00000526627 MTX3Q5HYI7 312 aa20.29■□□□□ 0.84
SMIM3-201ENST00000526627 PCYOX1LQ8NBM8 494 aa20.29■□□□□ 0.84
SMIM3-201ENST00000526627 FAM110BQ8TC76 370 aa20.29■□□□□ 0.84
SMIM3-201ENST00000526627 SLC29A1Q99808 456 aa20.29■□□□□ 0.84
SMIM3-201ENST00000526627 SDR39U1Q9NRG7 319 aaPredicted RBP20.29■□□□□ 0.84
SMIM3-201ENST00000526627 PLK2Q9NYY3 685 aa20.29■□□□□ 0.84
SMIM3-201ENST00000526627 BTRCQ9Y297 605 aa20.29■□□□□ 0.84
SMIM3-201ENST00000526627 SLC38A8A6NNN8 435 aa20.28■□□□□ 0.84
SMIM3-201ENST00000526627 SUPT3HB4E1H0 165 aa20.28■□□□□ 0.84
SMIM3-201ENST00000526627 C9JVG2 144 aa20.28■□□□□ 0.84
SMIM3-201ENST00000526627 KIF3CO14782 793 aa20.28■□□□□ 0.84
SMIM3-201ENST00000526627 SUPT3HO75486 399 aa20.28■□□□□ 0.84
SMIM3-201ENST00000526627 ECI2O75521 394 aa20.28■□□□□ 0.84
SMIM3-201ENST00000526627 CLPTM1O96005 669 aa20.28■□□□□ 0.84
SMIM3-201ENST00000526627 FAM58BPP0C7Q3 252 aa20.28■□□□□ 0.84
SMIM3-201ENST00000526627 LINC00032P0C843 101 aa20.28■□□□□ 0.84
SMIM3-201ENST00000526627 SLC11A1P49279 550 aa20.28■□□□□ 0.84
SMIM3-201ENST00000526627 RPS24P62847 133 aaKnown RBP20.28■□□□□ 0.84
SMIM3-201ENST00000526627 FBXO48Q5FWF7 155 aa20.28■□□□□ 0.84
SMIM3-201ENST00000526627 IYDQ6PHW0 289 aa20.28■□□□□ 0.84
SMIM3-201ENST00000526627 AFTPHQ6ULP2 937 aa20.28■□□□□ 0.84
SMIM3-201ENST00000526627 AMIGO2Q86SJ2 522 aa20.28■□□□□ 0.84
SMIM3-201ENST00000526627 DHFR2Q86XF0 187 aa20.28■□□□□ 0.84
SMIM3-201ENST00000526627 MIER2Q8N344 545 aa20.28■□□□□ 0.84
SMIM3-201ENST00000526627 STAG3L4Q8TBR4 150 aa20.28■□□□□ 0.84
SMIM3-201ENST00000526627 SLC45A3Q96JT2 553 aa20.28■□□□□ 0.84
SMIM3-201ENST00000526627 EXOC2Q96KP1 924 aa20.28■□□□□ 0.84
SMIM3-201ENST00000526627 CASD1Q96PB1 797 aa20.28■□□□□ 0.84
SMIM3-201ENST00000526627 SLC30A3Q99726 388 aa20.28■□□□□ 0.84
SMIM3-201ENST00000526627 SYTL2Q9HCH5 934 aa20.28■□□□□ 0.84
SMIM3-201ENST00000526627 UBA2Q9UBT2 640 aaPredicted RBP20.28■□□□□ 0.84
SMIM3-201ENST00000526627 RNF11Q9Y3C5 154 aa20.28■□□□□ 0.84
SMIM3-201ENST00000526627 COMMD3-BMI1R4GMX3 469 aa20.28■□□□□ 0.84
SMIM3-201ENST00000526627 ZNF839A8K0R7 811 aa20.28■□□□□ 0.84
SMIM3-201ENST00000526627 CDC7O00311 574 aa20.28■□□□□ 0.84
SMIM3-201ENST00000526627 MATN4O95460 622 aa20.28■□□□□ 0.84
SMIM3-201ENST00000526627 RPS17P08708 135 aaKnown RBP20.28■□□□□ 0.84
SMIM3-201ENST00000526627 ECT2LQ008S8 904 aa20.28■□□□□ 0.84
SMIM3-201ENST00000526627 LCP2Q13094 533 aa20.28■□□□□ 0.84
SMIM3-201ENST00000526627 TSNQ15631 228 aaKnown RBP20.28■□□□□ 0.84
SMIM3-201ENST00000526627 GEN1Q17RS7 908 aa20.28■□□□□ 0.84
SMIM3-201ENST00000526627 IRAK1BP1Q5VVH5 260 aa20.28■□□□□ 0.84
SMIM3-201ENST00000526627 DDIASQ8IXT1 998 aa20.28■□□□□ 0.84
SMIM3-201ENST00000526627 FBXO39Q8N4B4 442 aa20.28■□□□□ 0.84
SMIM3-201ENST00000526627 FUBP1Q96AE4 644 aaKnown RBP20.28■□□□□ 0.84
SMIM3-201ENST00000526627 SPON2Q9BUD6 331 aa20.28■□□□□ 0.84
SMIM3-201ENST00000526627 MRPS26Q9BYN8 205 aaKnown RBP20.28■□□□□ 0.84
SMIM3-201ENST00000526627 TAS2R13Q9NYV9 303 aa20.28■□□□□ 0.84
SMIM3-201ENST00000526627 NDUFA13Q9P0J0 144 aa20.28■□□□□ 0.84
SMIM3-201ENST00000526627 RNF112Q9ULX5 631 aa20.28■□□□□ 0.84
SMIM3-201ENST00000526627 NDUFAF1Q9Y375 327 aa20.28■□□□□ 0.84
SMIM3-201ENST00000526627 OAS3Q9Y6K5 1087 aaKnown RBP20.28■□□□□ 0.84
SMIM3-201ENST00000526627 CASP8AP2Q9UKL3 1982 aa20.28■□□□□ 0.84
SMIM3-201ENST00000526627 HTTP42858 3142 aa20.28■□□□□ 0.84
SMIM3-201ENST00000526627 VILLO15195 856 aa20.27■□□□□ 0.84
SMIM3-201ENST00000526627 KDELR3O43731 214 aa20.27■□□□□ 0.84
SMIM3-201ENST00000526627 LBPP18428 481 aa20.27■□□□□ 0.84
SMIM3-201ENST00000526627 TAF1AQ15573 450 aaPredicted RBP20.27■□□□□ 0.84
SMIM3-201ENST00000526627 FUT10Q6P4F1 479 aa20.27■□□□□ 0.84
SMIM3-201ENST00000526627 RNF180Q86T96 592 aa20.27■□□□□ 0.84
SMIM3-201ENST00000526627 SLC15A3Q8IY34 581 aa20.27■□□□□ 0.84
SMIM3-201ENST00000526627 TUBGCP3Q96CW5 907 aa20.27■□□□□ 0.84
SMIM3-201ENST00000526627 BIRC8Q96P09 236 aa20.27■□□□□ 0.84
SMIM3-201ENST00000526627 GPR21Q99679 349 aa20.27■□□□□ 0.84
SMIM3-201ENST00000526627 CINPQ9BW66 212 aaPredicted RBP20.27■□□□□ 0.84
SMIM3-201ENST00000526627 TTLL2Q9BWV7 592 aa20.27■□□□□ 0.84
SMIM3-201ENST00000526627 IL1RL2Q9HB29 575 aa20.27■□□□□ 0.84
SMIM3-201ENST00000526627 RNF186Q9NXI6 227 aa20.27■□□□□ 0.84
SMIM3-201ENST00000526627 SNX13Q9Y5W8 968 aa20.27■□□□□ 0.84
SMIM3-201ENST00000526627 INSIG1O15503 277 aa20.27■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms