RNA–Protein interactions for RNA: ENST00000526430.1

NEDD8-204, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 3

Gene NEDD8, Length 286 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-204ENST00000526430 NSUN2Q08J23 767 aaKnown RBP eCLIP10.94□□□□□ -0.66
NEDD8-204ENST00000526430 NIPAL4Q0D2K0 466 aa10.94□□□□□ -0.66
NEDD8-204ENST00000526430 RFTN1Q14699 578 aaPredicted RBP10.94□□□□□ -0.66
NEDD8-204ENST00000526430 OASLQ15646 514 aaKnown RBP10.94□□□□□ -0.66
NEDD8-204ENST00000526430 ZNF284Q2VY69 593 aa10.94□□□□□ -0.66
NEDD8-204ENST00000526430 MYLK3Q32MK0 819 aa10.94□□□□□ -0.66
NEDD8-204ENST00000526430 ACCSLQ4AC99 568 aa10.94□□□□□ -0.66
NEDD8-204ENST00000526430 ZNF542PQ5EBM4 170 aa10.94□□□□□ -0.66
NEDD8-204ENST00000526430 TMCO4Q5TGY1 634 aa10.94□□□□□ -0.66
NEDD8-204ENST00000526430 ZNF787Q6DD87 383 aa10.94□□□□□ -0.66
NEDD8-204ENST00000526430 CAPRIN2Q6IMN6 1127 aaKnown RBP10.94□□□□□ -0.66
NEDD8-204ENST00000526430 SYT10Q6XYQ8 523 aa10.94□□□□□ -0.66
NEDD8-204ENST00000526430 KYAT3Q6YP21 454 aaKnown RBP10.94□□□□□ -0.66
NEDD8-204ENST00000526430 Q6ZSR6 202 aa10.94□□□□□ -0.66
NEDD8-204ENST00000526430 HORMAD1Q86X24 394 aa10.94□□□□□ -0.66
NEDD8-204ENST00000526430 ZFAND4Q86XD8 727 aa10.94□□□□□ -0.66
NEDD8-204ENST00000526430 ATPAF2Q8N5M1 289 aa10.94□□□□□ -0.66
NEDD8-204ENST00000526430 PCDH20Q8N6Y1 951 aaKnown RBP10.94□□□□□ -0.66
NEDD8-204ENST00000526430 OR2AP1Q8NGE2 309 aa10.94□□□□□ -0.66
NEDD8-204ENST00000526430 ACTRT1Q8TDG2 376 aa10.94□□□□□ -0.66
NEDD8-204ENST00000526430 C1orf54Q8WWF1 131 aa10.94□□□□□ -0.66
NEDD8-204ENST00000526430 ATG4AQ8WYN0 398 aa10.94□□□□□ -0.66
NEDD8-204ENST00000526430 OR8D1Q8WZ84 308 aa10.94□□□□□ -0.66
NEDD8-204ENST00000526430 TADA1Q96BN2 335 aa10.94□□□□□ -0.66
NEDD8-204ENST00000526430 PBKQ96KB5 322 aa10.94□□□□□ -0.66
NEDD8-204ENST00000526430 TBATAQ96M53 351 aa10.94□□□□□ -0.66
NEDD8-204ENST00000526430 GFM1Q96RP9 751 aaKnown RBP10.94□□□□□ -0.66
NEDD8-204ENST00000526430 MGME1Q9BQP7 344 aa10.94□□□□□ -0.66
NEDD8-204ENST00000526430 GORASP1Q9BQQ3 440 aa10.94□□□□□ -0.66
NEDD8-204ENST00000526430 CEP41Q9BYV8 373 aa10.94□□□□□ -0.66
NEDD8-204ENST00000526430 TM6SF2Q9BZW4 377 aa10.94□□□□□ -0.66
NEDD8-204ENST00000526430 SP110Q9HB58 689 aa10.94□□□□□ -0.66
NEDD8-204ENST00000526430 PISDQ9UG56 409 aa10.94□□□□□ -0.66
NEDD8-204ENST00000526430 DNPEPQ9ULA0 475 aa10.94□□□□□ -0.66
NEDD8-204ENST00000526430 HS3ST3A1Q9Y663 406 aa10.94□□□□□ -0.66
NEDD8-204ENST00000526430 PCNX1Q96RV3 2341 aa10.93□□□□□ -0.66
NEDD8-204ENST00000526430 A0A1W2PQU0 124 aa10.93□□□□□ -0.66
NEDD8-204ENST00000526430 C1QTNF3-AMACRE9PGA6 284 aa10.93□□□□□ -0.66
NEDD8-204ENST00000526430 TRAFD1O14545 582 aaPredicted RBP10.93□□□□□ -0.66
NEDD8-204ENST00000526430 MTSS1O43312 755 aa10.93□□□□□ -0.66
NEDD8-204ENST00000526430 LIASO43766 372 aa10.93□□□□□ -0.66
NEDD8-204ENST00000526430 GSRP00390 522 aa10.93□□□□□ -0.66
NEDD8-204ENST00000526430 PRLP01236 227 aa10.93□□□□□ -0.66
NEDD8-204ENST00000526430 JCHAINP01591 159 aa10.93□□□□□ -0.66
NEDD8-204ENST00000526430 HLA-DQB2P05538 268 aa10.93□□□□□ -0.66
NEDD8-204ENST00000526430 RBP3P10745 1247 aa10.93□□□□□ -0.66
NEDD8-204ENST00000526430 MX2P20592 715 aa10.93□□□□□ -0.66
NEDD8-204ENST00000526430 ITGB7P26010 798 aa10.93□□□□□ -0.66
NEDD8-204ENST00000526430 CHRNA3P32297 505 aa10.93□□□□□ -0.66
NEDD8-204ENST00000526430 NNMTP40261 264 aa10.93□□□□□ -0.66
NEDD8-204ENST00000526430 CCNHP51946 323 aaPredicted RBP10.93□□□□□ -0.66
NEDD8-204ENST00000526430 GDF10P55107 478 aa10.93□□□□□ -0.66
NEDD8-204ENST00000526430 EIF3EP60228 445 aaKnown RBP10.93□□□□□ -0.66
NEDD8-204ENST00000526430 MAXP61244 160 aa10.93□□□□□ -0.66
NEDD8-204ENST00000526430 KLRB1Q12918 225 aa10.93□□□□□ -0.66
NEDD8-204ENST00000526430 CCNG2Q16589 344 aa10.93□□□□□ -0.66
NEDD8-204ENST00000526430 TEX44Q53QW1 395 aa10.93□□□□□ -0.66
NEDD8-204ENST00000526430 ODF2Q5BJF6 829 aa10.93□□□□□ -0.66
NEDD8-204ENST00000526430 PIP5KL1Q5T9C9 394 aa10.93□□□□□ -0.66
NEDD8-204ENST00000526430 MARC1Q5VT66 337 aa10.93□□□□□ -0.66
NEDD8-204ENST00000526430 TTC27Q6P3X3 843 aa10.93□□□□□ -0.66
NEDD8-204ENST00000526430 PTAR1Q7Z6K3 402 aaPredicted RBP10.93□□□□□ -0.66
NEDD8-204ENST00000526430 ZSWIM9Q86XI8 627 aa10.93□□□□□ -0.66
NEDD8-204ENST00000526430 ZNF354CQ86Y25 554 aa10.93□□□□□ -0.66
NEDD8-204ENST00000526430 GLIS1Q8NBF1 620 aa10.93□□□□□ -0.66
NEDD8-204ENST00000526430 CCNYQ8ND76 341 aa10.93□□□□□ -0.66
NEDD8-204ENST00000526430 TMIEQ8NEW7 156 aa10.93□□□□□ -0.66
NEDD8-204ENST00000526430 OR6K2Q8NGY2 324 aa10.93□□□□□ -0.66
NEDD8-204ENST00000526430 EXOC2Q96KP1 924 aa10.93□□□□□ -0.66
NEDD8-204ENST00000526430 TEKT5Q96M29 485 aa10.93□□□□□ -0.66
NEDD8-204ENST00000526430 QKIQ96PU8 341 aaKnown RBP eCLIP10.93□□□□□ -0.66
NEDD8-204ENST00000526430 NAPGQ99747 312 aaPredicted RBP10.93□□□□□ -0.66
NEDD8-204ENST00000526430 CPEB1Q9BZB8 566 aaKnown RBP10.93□□□□□ -0.66
NEDD8-204ENST00000526430 BRD8Q9H0E9 1235 aa10.93□□□□□ -0.66
NEDD8-204ENST00000526430 SYNDIG1Q9H7V2 258 aa10.93□□□□□ -0.66
NEDD8-204ENST00000526430 FZD3Q9NPG1 666 aa10.93□□□□□ -0.66
NEDD8-204ENST00000526430 ZNF71Q9NQZ8 489 aaPredicted RBP10.93□□□□□ -0.66
NEDD8-204ENST00000526430 RBM22Q9NW64 420 aaKnown RBP eCLIP10.93□□□□□ -0.66
NEDD8-204ENST00000526430 FOXJ2Q9P0K8 574 aa10.93□□□□□ -0.66
NEDD8-204ENST00000526430 HECAQ9UBI9 543 aaPredicted RBP10.93□□□□□ -0.66
NEDD8-204ENST00000526430 LOXL2Q9Y4K0 774 aa10.93□□□□□ -0.66
NEDD8-204ENST00000526430 HIVEP1P15822 2718 aa10.93□□□□□ -0.66
NEDD8-204ENST00000526430 ANKRD36A6QL64 1941 aa10.92□□□□□ -0.66
NEDD8-204ENST00000526430 HACD1B0YJ81 288 aa10.92□□□□□ -0.66
NEDD8-204ENST00000526430 C9orf172C9J069 976 aa10.92□□□□□ -0.66
NEDD8-204ENST00000526430 SPINT1O43278 529 aa10.92□□□□□ -0.66
NEDD8-204ENST00000526430 LEFTY1O75610 366 aa10.92□□□□□ -0.66
NEDD8-204ENST00000526430 POP4O95707 220 aaKnown RBP10.92□□□□□ -0.66
NEDD8-204ENST00000526430 DDAH2O95865 285 aa10.92□□□□□ -0.66
NEDD8-204ENST00000526430 MMP13P45452 471 aa10.92□□□□□ -0.66
NEDD8-204ENST00000526430 UQCRFS1P47985 274 aa10.92□□□□□ -0.66
NEDD8-204ENST00000526430 GEMIN4P57678 1058 aaKnown RBP10.92□□□□□ -0.66
NEDD8-204ENST00000526430 CLDN2P57739 230 aa10.92□□□□□ -0.66
NEDD8-204ENST00000526430 RHOAP61586 193 aa10.92□□□□□ -0.66
NEDD8-204ENST00000526430 DSC2Q02487 901 aa10.92□□□□□ -0.66
NEDD8-204ENST00000526430 AP1B1Q10567 949 aa10.92□□□□□ -0.66
NEDD8-204ENST00000526430 CYP1B1Q16678 543 aa10.92□□□□□ -0.66
NEDD8-204ENST00000526430 TMEM259Q4ZIN3 620 aa10.92□□□□□ -0.66
NEDD8-204ENST00000526430 ARSIQ5FYB1 569 aa10.92□□□□□ -0.66
NEDD8-204ENST00000526430 SEL1L2Q5TEA6 688 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms