RNA–Protein interactions for RNA: ENST00000526044.5

USP48-211, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 549 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-211ENST00000526044 NKX1-2Q9UD57 310 aaPredicted RBP4.69□□□□□ -1.66
USP48-211ENST00000526044 C2CD2Q9Y426 696 aa4.69□□□□□ -1.66
USP48-211ENST00000526044 LTBP2Q14767 1821 aa4.69□□□□□ -1.66
USP48-211ENST00000526044 PDCD11Q14690 1871 aaKnown RBP4.69□□□□□ -1.66
USP48-211ENST00000526044 HSFX4A0A1B0GTS1 333 aaPredicted RBP4.68□□□□□ -1.66
USP48-211ENST00000526044 HSFX3A0A1B0GWH4 333 aaPredicted RBP4.68□□□□□ -1.66
USP48-211ENST00000526044 GTPBP10A4D1E9 387 aaKnown RBP4.68□□□□□ -1.66
USP48-211ENST00000526044 CLCA1A8K7I4 914 aa4.68□□□□□ -1.66
USP48-211ENST00000526044 LGALS16A8MUM7 142 aa4.68□□□□□ -1.66
USP48-211ENST00000526044 PIRO00625 290 aa4.68□□□□□ -1.66
USP48-211ENST00000526044 PTGESO14684 152 aa4.68□□□□□ -1.66
USP48-211ENST00000526044 INPPL1O15357 1258 aa4.68□□□□□ -1.66
USP48-211ENST00000526044 AP5Z1O43299 807 aa4.68□□□□□ -1.66
USP48-211ENST00000526044 TADA2AO75478 443 aa4.68□□□□□ -1.66
USP48-211ENST00000526044 DDHD2O94830 711 aa4.68□□□□□ -1.66
USP48-211ENST00000526044 CREB1P16220 341 aa4.68□□□□□ -1.66
USP48-211ENST00000526044 TSHRP16473 764 aa4.68□□□□□ -1.66
USP48-211ENST00000526044 PON1P27169 355 aa4.68□□□□□ -1.66
USP48-211ENST00000526044 PIK3CAP42336 1068 aa4.68□□□□□ -1.66
USP48-211ENST00000526044 OR1G1P47890 313 aa4.68□□□□□ -1.66
USP48-211ENST00000526044 ALDH7A1P49419 539 aaKnown RBP4.68□□□□□ -1.66
USP48-211ENST00000526044 MXI1P50539 228 aa4.68□□□□□ -1.66
USP48-211ENST00000526044 CLCNKBP51801 687 aa4.68□□□□□ -1.66
USP48-211ENST00000526044 MYL6P60660 151 aa4.68□□□□□ -1.66
USP48-211ENST00000526044 MYL7Q01449 175 aa4.68□□□□□ -1.66
USP48-211ENST00000526044 TFF2Q03403 129 aa4.68□□□□□ -1.66
USP48-211ENST00000526044 BTG3Q14201 252 aaPredicted RBP4.68□□□□□ -1.66
USP48-211ENST00000526044 SYCP1Q15431 976 aa4.68□□□□□ -1.66
USP48-211ENST00000526044 EXOC3L4Q17RC7 722 aa4.68□□□□□ -1.66
USP48-211ENST00000526044 ZACNQ401N2 412 aa4.68□□□□□ -1.66
USP48-211ENST00000526044 GLRA4Q5JXX5 417 aa4.68□□□□□ -1.66
USP48-211ENST00000526044 C9orf50Q5SZB4 431 aa4.68□□□□□ -1.66
USP48-211ENST00000526044 C1QTNF12Q5T7M4 302 aa4.68□□□□□ -1.66
USP48-211ENST00000526044 KLHDC7AQ5VTJ3 777 aa4.68□□□□□ -1.66
USP48-211ENST00000526044 C9orf57Q5W0N0 161 aa4.68□□□□□ -1.66
USP48-211ENST00000526044 DENND2CQ68D51 928 aa4.68□□□□□ -1.66
USP48-211ENST00000526044 CCDC70Q6NSX1 233 aa4.68□□□□□ -1.66
USP48-211ENST00000526044 C15orf39Q6ZRI6 1047 aa4.68□□□□□ -1.66
USP48-211ENST00000526044 PTCHD4Q6ZW05 846 aa4.68□□□□□ -1.66
USP48-211ENST00000526044 BEND5Q7L4P6 421 aa4.68□□□□□ -1.66
USP48-211ENST00000526044 APTXQ7Z2E3 356 aaKnown RBP4.68□□□□□ -1.66
USP48-211ENST00000526044 TMCO2Q7Z6W1 182 aaPredicted RBP4.68□□□□□ -1.66
USP48-211ENST00000526044 LIX1LQ8IVB5 337 aa4.68□□□□□ -1.66
USP48-211ENST00000526044 HERC6Q8IVU3 1022 aa4.68□□□□□ -1.66
USP48-211ENST00000526044 EFCAB13Q8IY85 973 aa4.68□□□□□ -1.66
USP48-211ENST00000526044 RNF152Q8N8N0 203 aa4.68□□□□□ -1.66
USP48-211ENST00000526044 CCDC89Q8N998 374 aa4.68□□□□□ -1.66
USP48-211ENST00000526044 TERB1Q8NA31 727 aa4.68□□□□□ -1.66
USP48-211ENST00000526044 TAS1R2Q8TE23 839 aa4.68□□□□□ -1.66
USP48-211ENST00000526044 C18orf25Q96B23 403 aaPredicted RBP4.68□□□□□ -1.66
USP48-211ENST00000526044 CTHRC1Q96CG8 243 aa4.68□□□□□ -1.66
USP48-211ENST00000526044 ZNF689Q96CS4 500 aaPredicted RBP4.68□□□□□ -1.66
USP48-211ENST00000526044 HPDLQ96IR7 371 aa4.68□□□□□ -1.66
USP48-211ENST00000526044 SNX18Q96RF0 628 aa4.68□□□□□ -1.66
USP48-211ENST00000526044 YME1L1Q96TA2 773 aa4.68□□□□□ -1.66
USP48-211ENST00000526044 RAD9AQ99638 391 aa4.68□□□□□ -1.66
USP48-211ENST00000526044 GDF15Q99988 308 aa4.68□□□□□ -1.66
USP48-211ENST00000526044 MACROD1Q9BQ69 325 aa4.68□□□□□ -1.66
USP48-211ENST00000526044 TMEM175Q9BSA9 504 aa4.68□□□□□ -1.66
USP48-211ENST00000526044 CRACR2AQ9BSW2 395 aa4.68□□□□□ -1.66
USP48-211ENST00000526044 NUP58Q9BVL2 599 aa4.68□□□□□ -1.66
USP48-211ENST00000526044 MRPL9Q9BYD2 267 aaKnown RBP4.68□□□□□ -1.66
USP48-211ENST00000526044 CIPCQ9C0C6 399 aa4.68□□□□□ -1.66
USP48-211ENST00000526044 MTMR12Q9C0I1 747 aa4.68□□□□□ -1.66
USP48-211ENST00000526044 HEYLQ9NQ87 328 aaPredicted RBP4.68□□□□□ -1.66
USP48-211ENST00000526044 TBC1D13Q9NVG8 400 aa4.68□□□□□ -1.66
USP48-211ENST00000526044 ITGA11Q9UKX5 1188 aa4.68□□□□□ -1.66
USP48-211ENST00000526044 COQ4Q9Y3A0 265 aa4.68□□□□□ -1.66
USP48-211ENST00000526044 PTPRJQ12913 1337 aa4.68□□□□□ -1.66
USP48-211ENST00000526044 BRCA2P51587 3418 aa4.67□□□□□ -1.66
USP48-211ENST00000526044 RALGAPA2Q2PPJ7 1873 aa4.67□□□□□ -1.66
USP48-211ENST00000526044 CASTOR2A6NHX0 329 aa4.67□□□□□ -1.66
USP48-211ENST00000526044 LINC01548A6NM66 108 aa4.67□□□□□ -1.66
USP48-211ENST00000526044 KPNA7A9QM74 516 aa4.67□□□□□ -1.66
USP48-211ENST00000526044 PRRT4C9JH25 899 aa4.67□□□□□ -1.66
USP48-211ENST00000526044 H7C1Q1 480 aa4.67□□□□□ -1.66
USP48-211ENST00000526044 AGPSO00116 658 aa4.67□□□□□ -1.66
USP48-211ENST00000526044 PODXLO00592 558 aa4.67□□□□□ -1.66
USP48-211ENST00000526044 APOL1O14791 398 aa4.67□□□□□ -1.66
USP48-211ENST00000526044 TRAPPC3O43617 180 aa4.67□□□□□ -1.66
USP48-211ENST00000526044 ZC3H11AO75152 810 aaKnown RBP eCLIP4.67□□□□□ -1.66
USP48-211ENST00000526044 B3GAT3O94766 335 aa4.67□□□□□ -1.66
USP48-211ENST00000526044 GJB5O95377 273 aa4.67□□□□□ -1.66
USP48-211ENST00000526044 ADCY5O95622 1261 aa4.67□□□□□ -1.66
USP48-211ENST00000526044 HLA-DRAP01903 254 aa4.67□□□□□ -1.66
USP48-211ENST00000526044 GALTP07902 379 aa4.67□□□□□ -1.66
USP48-211ENST00000526044 P4HA1P13674 534 aa4.67□□□□□ -1.66
USP48-211ENST00000526044 ZNF37AP17032 561 aaPredicted RBP4.67□□□□□ -1.66
USP48-211ENST00000526044 FPR3P25089 353 aa4.67□□□□□ -1.66
USP48-211ENST00000526044 PNPLA4P41247 253 aa4.67□□□□□ -1.66
USP48-211ENST00000526044 PPM1FP49593 454 aaPredicted RBP4.67□□□□□ -1.66
USP48-211ENST00000526044 TAF6P49848 677 aa4.67□□□□□ -1.66
USP48-211ENST00000526044 ZNF75DP51815 510 aa4.67□□□□□ -1.66
USP48-211ENST00000526044 GEMIN4P57678 1058 aaKnown RBP4.67□□□□□ -1.66
USP48-211ENST00000526044 SLC10A2Q12908 348 aaPredicted RBP4.67□□□□□ -1.66
USP48-211ENST00000526044 LRMPQ12912 555 aa4.67□□□□□ -1.66
USP48-211ENST00000526044 TOMM20Q15388 145 aa4.67□□□□□ -1.66
USP48-211ENST00000526044 NAB2Q15742 525 aa4.67□□□□□ -1.66
USP48-211ENST00000526044 UPP1Q16831 310 aa4.67□□□□□ -1.66
USP48-211ENST00000526044 EPC2Q52LR7 807 aa4.67□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms