RNA–Protein interactions for RNA: ENST00000525970.5

CSDE1-211, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 503 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-211ENST00000525970 RHODO00212 210 aa4.59□□□□□ -1.67
CSDE1-211ENST00000525970 ADAM10O14672 748 aa4.59□□□□□ -1.67
CSDE1-211ENST00000525970 ATP2C2O75185 946 aa4.59□□□□□ -1.67
CSDE1-211ENST00000525970 CLDN7O95471 211 aa4.59□□□□□ -1.67
CSDE1-211ENST00000525970 HIST1H2ABP04908 130 aa4.59□□□□□ -1.67
CSDE1-211ENST00000525970 ATP6V1B1P15313 513 aa4.59□□□□□ -1.67
CSDE1-211ENST00000525970 HIST1H2ADP20671 130 aa4.59□□□□□ -1.67
CSDE1-211ENST00000525970 MC5RP33032 325 aa4.59□□□□□ -1.67
CSDE1-211ENST00000525970 CSE1LP55060 971 aaKnown RBP4.59□□□□□ -1.67
CSDE1-211ENST00000525970 CFHR1Q03591 330 aa4.59□□□□□ -1.67
CSDE1-211ENST00000525970 FAM27E3Q08E93 113 aa4.59□□□□□ -1.67
CSDE1-211ENST00000525970 NAE1Q13564 534 aa4.59□□□□□ -1.67
CSDE1-211ENST00000525970 LPIN1Q14693 890 aa4.59□□□□□ -1.67
CSDE1-211ENST00000525970 E2F5Q15329 346 aa4.59□□□□□ -1.67
CSDE1-211ENST00000525970 SLC9C1Q4G0N8 1177 aa4.59□□□□□ -1.67
CSDE1-211ENST00000525970 ALG10Q5BKT4 473 aa4.59□□□□□ -1.67
CSDE1-211ENST00000525970 ALG10BQ5I7T1 473 aa4.59□□□□□ -1.67
CSDE1-211ENST00000525970 MPP7Q5T2T1 576 aa4.59□□□□□ -1.67
CSDE1-211ENST00000525970 PXDC1Q5TGL8 231 aa4.59□□□□□ -1.67
CSDE1-211ENST00000525970 NCAPH2Q6IBW4 605 aa4.59□□□□□ -1.67
CSDE1-211ENST00000525970 DLK2Q6UY11 383 aa4.59□□□□□ -1.67
CSDE1-211ENST00000525970 TRILQ7L0X0 811 aa4.59□□□□□ -1.67
CSDE1-211ENST00000525970 DPPA4Q7L190 304 aa4.59□□□□□ -1.67
CSDE1-211ENST00000525970 HIST3H2AQ7L7L0 130 aa4.59□□□□□ -1.67
CSDE1-211ENST00000525970 ZSCAN30Q86W11 494 aa4.59□□□□□ -1.67
CSDE1-211ENST00000525970 EPHX4Q8IUS5 362 aa4.59□□□□□ -1.67
CSDE1-211ENST00000525970 ARID3BQ8IVW6 561 aaPredicted RBP4.59□□□□□ -1.67
CSDE1-211ENST00000525970 RBFAQ8N0V3 343 aa4.59□□□□□ -1.67
CSDE1-211ENST00000525970 CARNMT1Q8N4J0 409 aa4.59□□□□□ -1.67
CSDE1-211ENST00000525970 PARP16Q8N5Y8 322 aa4.59□□□□□ -1.67
CSDE1-211ENST00000525970 OR10S1Q8NGN2 331 aa4.59□□□□□ -1.67
CSDE1-211ENST00000525970 GDAP1Q8TB36 358 aa4.59□□□□□ -1.67
CSDE1-211ENST00000525970 SIGLEC11Q96RL6 698 aa4.59□□□□□ -1.67
CSDE1-211ENST00000525970 FNBP1Q96RU3 617 aa4.59□□□□□ -1.67
CSDE1-211ENST00000525970 ACOX2Q99424 681 aa4.59□□□□□ -1.67
CSDE1-211ENST00000525970 FAM129AQ9BZQ8 928 aa4.59□□□□□ -1.67
CSDE1-211ENST00000525970 ZNF541Q9H0D2 1346 aa4.59□□□□□ -1.67
CSDE1-211ENST00000525970 PPIL3Q9H2H8 161 aaKnown RBP4.59□□□□□ -1.67
CSDE1-211ENST00000525970 TRNAU1APQ9NX07 287 aaKnown RBP4.59□□□□□ -1.67
CSDE1-211ENST00000525970 TUBA8Q9NY65 449 aaPredicted RBP4.59□□□□□ -1.67
CSDE1-211ENST00000525970 COPG2Q9UBF2 871 aa4.59□□□□□ -1.67
CSDE1-211ENST00000525970 DNAJB9Q9UBS3 223 aa4.59□□□□□ -1.67
CSDE1-211ENST00000525970 DNAJB4Q9UDY4 337 aa4.59□□□□□ -1.67
CSDE1-211ENST00000525970 FBXW11Q9UKB1 542 aa4.59□□□□□ -1.67
CSDE1-211ENST00000525970 UTS2RQ9UKP6 389 aa4.59□□□□□ -1.67
CSDE1-211ENST00000525970 ZNF148Q9UQR1 794 aa4.59□□□□□ -1.67
CSDE1-211ENST00000525970 R3HDM2Q9Y2K5 976 aaKnown RBP4.59□□□□□ -1.67
CSDE1-211ENST00000525970 CLIC4Q9Y696 253 aa4.59□□□□□ -1.67
CSDE1-211ENST00000525970 ZNF335Q9H4Z2 1342 aaPredicted RBP4.58□□□□□ -1.68
CSDE1-211ENST00000525970 MAGEB17A8MXT2 336 aa4.58□□□□□ -1.68
CSDE1-211ENST00000525970 ATP2A1O14983 1001 aa4.58□□□□□ -1.68
CSDE1-211ENST00000525970 TADA2AO75478 443 aa4.58□□□□□ -1.68
CSDE1-211ENST00000525970 SLCO2B1O94956 709 aa4.58□□□□□ -1.68
CSDE1-211ENST00000525970 GOSR1O95249 250 aa4.58□□□□□ -1.68
CSDE1-211ENST00000525970 SIX3O95343 332 aaPredicted RBP4.58□□□□□ -1.68
CSDE1-211ENST00000525970 MYZAPP0CAP1 466 aa4.58□□□□□ -1.68
CSDE1-211ENST00000525970 CHATP28329 748 aa4.58□□□□□ -1.68
CSDE1-211ENST00000525970 HOXD9P28356 352 aaPredicted RBP4.58□□□□□ -1.68
CSDE1-211ENST00000525970 TNFSF8P32971 234 aa4.58□□□□□ -1.68
CSDE1-211ENST00000525970 TCF7P36402 384 aaPredicted RBP4.58□□□□□ -1.68
CSDE1-211ENST00000525970 CCR10P46092 362 aa4.58□□□□□ -1.68
CSDE1-211ENST00000525970 COMPP49747 757 aaPredicted RBP4.58□□□□□ -1.68
CSDE1-211ENST00000525970 NPY4RP50391 375 aa4.58□□□□□ -1.68
CSDE1-211ENST00000525970 PLCD1P51178 756 aa4.58□□□□□ -1.68
CSDE1-211ENST00000525970 RPS13P62277 151 aaKnown RBP4.58□□□□□ -1.68
CSDE1-211ENST00000525970 ADORA2A-AS1P86434 159 aa4.58□□□□□ -1.68
CSDE1-211ENST00000525970 SORDQ00796 357 aa4.58□□□□□ -1.68
CSDE1-211ENST00000525970 ID2Q02363 134 aa4.58□□□□□ -1.68
CSDE1-211ENST00000525970 RABEP1Q15276 862 aa4.58□□□□□ -1.68
CSDE1-211ENST00000525970 CBWD6Q4V339 395 aa4.58□□□□□ -1.68
CSDE1-211ENST00000525970 MIDNQ504T8 468 aa4.58□□□□□ -1.68
CSDE1-211ENST00000525970 CBWD3Q5JTY5 395 aa4.58□□□□□ -1.68
CSDE1-211ENST00000525970 ANKRD54Q6NXT1 300 aa4.58□□□□□ -1.68
CSDE1-211ENST00000525970 CAVIN1Q6NZI2 390 aaKnown RBP4.58□□□□□ -1.68
CSDE1-211ENST00000525970 SHC4Q6S5L8 630 aa4.58□□□□□ -1.68
CSDE1-211ENST00000525970 PQLC2Q6ZP29 291 aa4.58□□□□□ -1.68
CSDE1-211ENST00000525970 MTSS1LQ765P7 747 aa4.58□□□□□ -1.68
CSDE1-211ENST00000525970 ERN2Q76MJ5 926 aaKnown RBP4.58□□□□□ -1.68
CSDE1-211ENST00000525970 CAMKMTQ7Z624 323 aa4.58□□□□□ -1.68
CSDE1-211ENST00000525970 CHCHD4Q8N4Q1 142 aa4.58□□□□□ -1.68
CSDE1-211ENST00000525970 DPP10Q8N608 796 aa4.58□□□□□ -1.68
CSDE1-211ENST00000525970 NANOGP1Q8N7R0 232 aa4.58□□□□□ -1.68
CSDE1-211ENST00000525970 NAT8LQ8N9F0 302 aa4.58□□□□□ -1.68
CSDE1-211ENST00000525970 LPGAT1Q92604 370 aa4.58□□□□□ -1.68
CSDE1-211ENST00000525970 SECISBP2LQ93073 1101 aaKnown RBP4.58□□□□□ -1.68
CSDE1-211ENST00000525970 PTERQ96BW5 349 aa4.58□□□□□ -1.68
CSDE1-211ENST00000525970 ZNF830Q96NB3 372 aaPredicted RBP4.58□□□□□ -1.68
CSDE1-211ENST00000525970 CDRT15Q96T59 188 aa4.58□□□□□ -1.68
CSDE1-211ENST00000525970 CITED2Q99967 270 aaPredicted RBP4.58□□□□□ -1.68
CSDE1-211ENST00000525970 MSTO1Q9BUK6 570 aa4.58□□□□□ -1.68
CSDE1-211ENST00000525970 THUMPD3Q9BV44 507 aaKnown RBP4.58□□□□□ -1.68
CSDE1-211ENST00000525970 SCNM1Q9BWG6 230 aa4.58□□□□□ -1.68
CSDE1-211ENST00000525970 SPRTNQ9H040 489 aaPredicted RBP4.58□□□□□ -1.68
CSDE1-211ENST00000525970 MMP27Q9H306 513 aa4.58□□□□□ -1.68
CSDE1-211ENST00000525970 ESRP2Q9H6T0 727 aaKnown RBP4.58□□□□□ -1.68
CSDE1-211ENST00000525970 MKKSQ9NPJ1 570 aaPredicted RBP4.58□□□□□ -1.68
CSDE1-211ENST00000525970 PAPOLBQ9NRJ5 636 aaKnown RBP4.58□□□□□ -1.68
CSDE1-211ENST00000525970 TMEM184CQ9NVA4 438 aa4.58□□□□□ -1.68
CSDE1-211ENST00000525970 HAO2Q9NYQ3 351 aa4.58□□□□□ -1.68
CSDE1-211ENST00000525970 TRBV5-3A0A0A0MS03 114 aa4.57□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms