RNA–Protein interactions for RNA: ENST00000525878.5

CSDE1-210, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 626 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-210ENST00000525878 TRPT1Q86TN4 253 aaKnown RBP3.76□□□□□ -1.81
CSDE1-210ENST00000525878 OR52I2Q8NH67 350 aa3.76□□□□□ -1.81
CSDE1-210ENST00000525878 HCAR2Q8TDS4 363 aa3.76□□□□□ -1.81
CSDE1-210ENST00000525878 STAMBPL1Q96FJ0 436 aa3.76□□□□□ -1.81
CSDE1-210ENST00000525878 KRTAP4-3Q9BYR4 195 aa3.76□□□□□ -1.81
CSDE1-210ENST00000525878 UPF2Q9HAU5 1272 aaKnown RBP3.76□□□□□ -1.81
CSDE1-210ENST00000525878 OGFRQ9NZT2 677 aa3.76□□□□□ -1.81
CSDE1-210ENST00000525878 hCG_1642624A0A1W2PR95 340 aa3.75□□□□□ -1.81
CSDE1-210ENST00000525878 IFNL4K9M1U5 179 aa3.75□□□□□ -1.81
CSDE1-210ENST00000525878 CLK1P49759 484 aaKnown RBP3.75□□□□□ -1.81
CSDE1-210ENST00000525878 UBE4AQ14139 1066 aa3.75□□□□□ -1.81
CSDE1-210ENST00000525878 ZNF766Q5HY98 468 aa3.75□□□□□ -1.81
CSDE1-210ENST00000525878 TECRLQ5HYJ1 363 aa3.75□□□□□ -1.81
CSDE1-210ENST00000525878 FBXO47Q5MNV8 452 aa3.75□□□□□ -1.81
CSDE1-210ENST00000525878 TTI2Q6NXR4 508 aa3.75□□□□□ -1.81
CSDE1-210ENST00000525878 ZNF704Q6ZNC4 412 aaPredicted RBP3.75□□□□□ -1.81
CSDE1-210ENST00000525878 QSOX2Q6ZRP7 698 aa3.75□□□□□ -1.81
CSDE1-210ENST00000525878 NRROSQ86YC3 692 aa3.75□□□□□ -1.81
CSDE1-210ENST00000525878 TDRPQ86YL5 185 aa3.75□□□□□ -1.81
CSDE1-210ENST00000525878 BEST3Q8N1M1 668 aa3.75□□□□□ -1.81
CSDE1-210ENST00000525878 THAP6Q8TBB0 222 aa3.75□□□□□ -1.81
CSDE1-210ENST00000525878 LINGO1Q96FE5 620 aa3.75□□□□□ -1.81
CSDE1-210ENST00000525878 NEUROD6Q96NK8 337 aa3.75□□□□□ -1.81
CSDE1-210ENST00000525878 CDK19Q9BWU1 502 aa3.75□□□□□ -1.81
CSDE1-210ENST00000525878 HEMGNQ9BXL5 484 aa3.75□□□□□ -1.81
CSDE1-210ENST00000525878 GLIS2Q9BZE0 524 aaPredicted RBP3.75□□□□□ -1.81
CSDE1-210ENST00000525878 HCN3Q9P1Z3 774 aa3.75□□□□□ -1.81
CSDE1-210ENST00000525878 PAK5Q9P286 719 aa3.75□□□□□ -1.81
CSDE1-210ENST00000525878 CD48P09326 243 aa3.74□□□□□ -1.81
CSDE1-210ENST00000525878 ZNF23P17027 643 aa3.74□□□□□ -1.81
CSDE1-210ENST00000525878 POLR2CP19387 275 aaPredicted RBP3.74□□□□□ -1.81
CSDE1-210ENST00000525878 ARCN1P48444 511 aaKnown RBP3.74□□□□□ -1.81
CSDE1-210ENST00000525878 ARL4CP56559 192 aa3.74□□□□□ -1.81
CSDE1-210ENST00000525878 CSNK2A1P68400 391 aaPredicted RBP3.74□□□□□ -1.81
CSDE1-210ENST00000525878 GRIK2Q13002 908 aa3.74□□□□□ -1.81
CSDE1-210ENST00000525878 NAE1Q13564 534 aa3.74□□□□□ -1.81
CSDE1-210ENST00000525878 PDCD2Q16342 344 aaPredicted RBP3.74□□□□□ -1.81
CSDE1-210ENST00000525878 ZC2HC1CQ53FD0 456 aaPredicted RBP3.74□□□□□ -1.81
CSDE1-210ENST00000525878 TMEM35AQ53FP2 167 aa3.74□□□□□ -1.81
CSDE1-210ENST00000525878 SUSD1Q6UWL2 747 aa3.74□□□□□ -1.81
CSDE1-210ENST00000525878 STXBP4Q6ZWJ1 553 aa3.74□□□□□ -1.81
CSDE1-210ENST00000525878 CCDC146Q8IYE0 955 aa3.74□□□□□ -1.81
CSDE1-210ENST00000525878 SPAG16Q8N0X2 631 aa3.74□□□□□ -1.81
CSDE1-210ENST00000525878 CSNK2A3Q8NEV1 391 aa3.74□□□□□ -1.81
CSDE1-210ENST00000525878 ARHGEF26Q96DR7 871 aa3.74□□□□□ -1.81
CSDE1-210ENST00000525878 GRAMD2BQ96HH9 432 aa3.74□□□□□ -1.81
CSDE1-210ENST00000525878 ART5Q96L15 291 aa3.74□□□□□ -1.81
CSDE1-210ENST00000525878 MPHOSPH8Q99549 860 aa3.74□□□□□ -1.81
CSDE1-210ENST00000525878 MAP3K20Q9NYL2 800 aaKnown RBP3.74□□□□□ -1.81
CSDE1-210ENST00000525878 ACSL5Q9ULC5 683 aa3.74□□□□□ -1.81
CSDE1-210ENST00000525878 ERVK-11Q9UQG0 969 aa3.74□□□□□ -1.81
CSDE1-210ENST00000525878 C2CD2Q9Y426 696 aa3.74□□□□□ -1.81
CSDE1-210ENST00000525878 GAGE10A6NGK3 116 aa3.73□□□□□ -1.81
CSDE1-210ENST00000525878 PSMD14O00487 310 aa3.73□□□□□ -1.81
CSDE1-210ENST00000525878 IRAK2O43187 625 aa3.73□□□□□ -1.81
CSDE1-210ENST00000525878 ZNF821O75541 412 aaPredicted RBP3.73□□□□□ -1.81
CSDE1-210ENST00000525878 IRF1P10914 325 aa3.73□□□□□ -1.81
CSDE1-210ENST00000525878 GRK6P43250 576 aa3.73□□□□□ -1.81
CSDE1-210ENST00000525878 SORDQ00796 357 aa3.73□□□□□ -1.81
CSDE1-210ENST00000525878 FOXM1Q08050 763 aa3.73□□□□□ -1.81
CSDE1-210ENST00000525878 PPP2R5BQ15173 497 aa3.73□□□□□ -1.81
CSDE1-210ENST00000525878 DECR1Q16698 335 aa3.73□□□□□ -1.81
CSDE1-210ENST00000525878 LCE3EQ5T5B0 92 aa3.73□□□□□ -1.81
CSDE1-210ENST00000525878 ANO1Q5XXA6 986 aa3.73□□□□□ -1.81
CSDE1-210ENST00000525878 RAD9BQ6WBX8 426 aa3.73□□□□□ -1.81
CSDE1-210ENST00000525878 RBMS3Q6XE24 437 aaKnown RBP3.73□□□□□ -1.81
CSDE1-210ENST00000525878 ZSCAN2Q7Z7L9 614 aaPredicted RBP3.73□□□□□ -1.81
CSDE1-210ENST00000525878 SAMD3Q8N6K7 520 aa3.73□□□□□ -1.81
CSDE1-210ENST00000525878 ACVR1CQ8NER5 493 aa3.73□□□□□ -1.81
CSDE1-210ENST00000525878 TAAR8Q969N4 342 aa3.73□□□□□ -1.81
CSDE1-210ENST00000525878 ZNF689Q96CS4 500 aaPredicted RBP3.73□□□□□ -1.81
CSDE1-210ENST00000525878 ORAI1Q96D31 301 aa3.73□□□□□ -1.81
CSDE1-210ENST00000525878 OPRPNQ99935 248 aaPredicted RBP3.73□□□□□ -1.81
CSDE1-210ENST00000525878 LBHD1Q9BQE6 289 aaPredicted RBP3.73□□□□□ -1.81
CSDE1-210ENST00000525878 TTYH1Q9H313 450 aaPredicted RBP3.73□□□□□ -1.81
CSDE1-210ENST00000525878 ZDHHC18Q9NUE0 388 aa3.73□□□□□ -1.81
CSDE1-210ENST00000525878 ACAD8Q9UKU7 415 aa3.73□□□□□ -1.81
CSDE1-210ENST00000525878 EIF3DO15371 548 aaKnown RBP eCLIP3.72□□□□□ -1.81
CSDE1-210ENST00000525878 SPINT2O43291 252 aa3.72□□□□□ -1.81
CSDE1-210ENST00000525878 SEC14L5O43304 696 aa3.72□□□□□ -1.81
CSDE1-210ENST00000525878 CIDEAO60543 219 aa3.72□□□□□ -1.81
CSDE1-210ENST00000525878 SP100P23497 879 aaPredicted RBP3.72□□□□□ -1.81
CSDE1-210ENST00000525878 AHRP35869 848 aa3.72□□□□□ -1.81
CSDE1-210ENST00000525878 GABRB2P47870 512 aa3.72□□□□□ -1.81
CSDE1-210ENST00000525878 TAS2R38P59533 333 aa3.72□□□□□ -1.81
CSDE1-210ENST00000525878 SLC12A1Q13621 1099 aa3.72□□□□□ -1.81
CSDE1-210ENST00000525878 ITGA9Q13797 1035 aa3.72□□□□□ -1.81
CSDE1-210ENST00000525878 SPINK14Q6IE38 97 aa3.72□□□□□ -1.81
CSDE1-210ENST00000525878 PQLC2Q6ZP29 291 aa3.72□□□□□ -1.81
CSDE1-210ENST00000525878 HMGCLL1Q8TB92 370 aa3.72□□□□□ -1.81
CSDE1-210ENST00000525878 ZNF473Q8WTR7 871 aaKnown RBP3.72□□□□□ -1.81
CSDE1-210ENST00000525878 SLC38A5Q8WUX1 472 aa3.72□□□□□ -1.81
CSDE1-210ENST00000525878 TBC1D20Q96BZ9 403 aa3.72□□□□□ -1.81
CSDE1-210ENST00000525878 ZNF653Q96CK0 615 aa3.72□□□□□ -1.81
CSDE1-210ENST00000525878 LINC00479Q96M42 142 aa3.72□□□□□ -1.81
CSDE1-210ENST00000525878 SEBOXQ9HB31 216 aaPredicted RBP3.72□□□□□ -1.81
CSDE1-210ENST00000525878 ITM2CQ9NQX7 267 aa3.72□□□□□ -1.81
CSDE1-210ENST00000525878 SLC25A10Q9UBX3 287 aaPredicted RBP3.72□□□□□ -1.81
CSDE1-210ENST00000525878 C5orf60A6NFR6 353 aa3.71□□□□□ -1.82
CSDE1-210ENST00000525878 TCERG1O14776 1098 aaKnown RBP3.71□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms