RNA–Protein interactions for RNA: ENST00000525211.5

CD44-214, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 5

Gene CD44, Length 747 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-214ENST00000525211 CCR5P51681 352 aa6.46□□□□□ -1.38
CD44-214ENST00000525211 PGGT1BP53609 377 aa6.46□□□□□ -1.38
CD44-214ENST00000525211 GPX6P59796 221 aa6.46□□□□□ -1.38
CD44-214ENST00000525211 VSNL1P62760 191 aa6.46□□□□□ -1.38
CD44-214ENST00000525211 B4GALNT1Q00973 533 aa6.46□□□□□ -1.38
CD44-214ENST00000525211 CREB5Q02930 508 aa6.46□□□□□ -1.38
CD44-214ENST00000525211 CDH17Q12864 832 aa6.46□□□□□ -1.38
CD44-214ENST00000525211 PDE1CQ14123 709 aaPredicted RBP6.46□□□□□ -1.38
CD44-214ENST00000525211 SIM2Q14190 667 aaPredicted RBP6.46□□□□□ -1.38
CD44-214ENST00000525211 ACOX1Q15067 660 aa6.46□□□□□ -1.38
CD44-214ENST00000525211 E2F5Q15329 346 aa6.46□□□□□ -1.38
CD44-214ENST00000525211 TAF1AQ15573 450 aaPredicted RBP6.46□□□□□ -1.38
CD44-214ENST00000525211 ERCC6LQ2NKX8 1250 aa6.46□□□□□ -1.38
CD44-214ENST00000525211 ZNF789Q5FWF6 425 aa6.46□□□□□ -1.38
CD44-214ENST00000525211 CFAP58Q5T655 872 aa6.46□□□□□ -1.38
CD44-214ENST00000525211 TSTD2Q5T7W7 516 aa6.46□□□□□ -1.38
CD44-214ENST00000525211 HENMT1Q5T8I9 393 aaKnown RBP6.46□□□□□ -1.38
CD44-214ENST00000525211 TCEAL6Q6IPX3 200 aa6.46□□□□□ -1.38
CD44-214ENST00000525211 NAPEPLDQ6IQ20 393 aa6.46□□□□□ -1.38
CD44-214ENST00000525211 TRMT10BQ6PF06 316 aaKnown RBP6.46□□□□□ -1.38
CD44-214ENST00000525211 XKR5Q6UX68 686 aa6.46□□□□□ -1.38
CD44-214ENST00000525211 FAM151BQ6UXP7 276 aa6.46□□□□□ -1.38
CD44-214ENST00000525211 PRR23BQ6ZRT6 265 aa6.46□□□□□ -1.38
CD44-214ENST00000525211 USP45Q70EL2 814 aa6.46□□□□□ -1.38
CD44-214ENST00000525211 GLT6D1Q7Z4J2 308 aa6.46□□□□□ -1.38
CD44-214ENST00000525211 MAATS1Q7Z4T9 603 aa6.46□□□□□ -1.38
CD44-214ENST00000525211 TRIM69Q86WT6 500 aa6.46□□□□□ -1.38
CD44-214ENST00000525211 SPATS2Q86XZ4 545 aaKnown RBP6.46□□□□□ -1.38
CD44-214ENST00000525211 SLC22A18ASQ8N1D0 253 aa6.46□□□□□ -1.38
CD44-214ENST00000525211 DCLK2Q8N568 766 aa6.46□□□□□ -1.38
CD44-214ENST00000525211 PAF1Q8N7H5 531 aa6.46□□□□□ -1.38
CD44-214ENST00000525211 DNAAF3Q8N9W5 541 aa6.46□□□□□ -1.38
CD44-214ENST00000525211 TMEM145Q8NBT3 493 aa6.46□□□□□ -1.38
CD44-214ENST00000525211 MNS1Q8NEH6 495 aa6.46□□□□□ -1.38
CD44-214ENST00000525211 OR13H1Q8NG92 308 aa6.46□□□□□ -1.38
CD44-214ENST00000525211 BRSK1Q8TDC3 778 aa6.46□□□□□ -1.38
CD44-214ENST00000525211 CXorf40AQ8TE69 158 aa6.46□□□□□ -1.38
CD44-214ENST00000525211 IFT81Q8WYA0 676 aa6.46□□□□□ -1.38
CD44-214ENST00000525211 DNASE2BQ8WZ79 361 aa6.46□□□□□ -1.38
CD44-214ENST00000525211 TCEAL3Q969E4 200 aa6.46□□□□□ -1.38
CD44-214ENST00000525211 HDAC10Q969S8 669 aa6.46□□□□□ -1.38
CD44-214ENST00000525211 RAB7BQ96AH8 199 aa6.46□□□□□ -1.38
CD44-214ENST00000525211 LRRC45Q96CN5 670 aa6.46□□□□□ -1.38
CD44-214ENST00000525211 PPP1R16AQ96I34 528 aa6.46□□□□□ -1.38
CD44-214ENST00000525211 RUNDC3BQ96NL0 473 aa6.46□□□□□ -1.38
CD44-214ENST00000525211 LENG8Q96PV6 779 aaPredicted RBP6.46□□□□□ -1.38
CD44-214ENST00000525211 CDK15Q96Q40 435 aa6.46□□□□□ -1.38
CD44-214ENST00000525211 ADGRE3Q9BY15 652 aa6.46□□□□□ -1.38
CD44-214ENST00000525211 SLC17A9Q9BYT1 436 aa6.46□□□□□ -1.38
CD44-214ENST00000525211 GPR63Q9BZJ6 419 aa6.46□□□□□ -1.38
CD44-214ENST00000525211 MIR1-1HGQ9H1L0 117 aa6.46□□□□□ -1.38
CD44-214ENST00000525211 TCEAL2Q9H3H9 227 aaPredicted RBP6.46□□□□□ -1.38
CD44-214ENST00000525211 ZFYVE1Q9HBF4 777 aa6.46□□□□□ -1.38
CD44-214ENST00000525211 PREBQ9HCU5 417 aa6.46□□□□□ -1.38
CD44-214ENST00000525211 TM9SF3Q9HD45 589 aa6.46□□□□□ -1.38
CD44-214ENST00000525211 PARD6AQ9NPB6 346 aa6.46□□□□□ -1.38
CD44-214ENST00000525211 SMYD2Q9NRG4 433 aa6.46□□□□□ -1.38
CD44-214ENST00000525211 RXFP3Q9NSD7 469 aa6.46□□□□□ -1.38
CD44-214ENST00000525211 TREX1Q9NSU2 369 aa6.46□□□□□ -1.38
CD44-214ENST00000525211 DNAAF2Q9NVR5 837 aaKnown RBP6.46□□□□□ -1.38
CD44-214ENST00000525211 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP6.46□□□□□ -1.38
CD44-214ENST00000525211 WHRNQ9P202 907 aa6.46□□□□□ -1.38
CD44-214ENST00000525211 KLF15Q9UIH9 416 aa6.46□□□□□ -1.38
CD44-214ENST00000525211 NFU1Q9UMS0 254 aa6.46□□□□□ -1.38
CD44-214ENST00000525211 SCML1Q9UN30 329 aa6.46□□□□□ -1.38
CD44-214ENST00000525211 CHMP2BQ9UQN3 213 aa6.46□□□□□ -1.38
CD44-214ENST00000525211 TCAF1Q9Y4C2 921 aa6.46□□□□□ -1.38
CD44-214ENST00000525211 PLEKHM1Q9Y4G2 1056 aa6.46□□□□□ -1.38
CD44-214ENST00000525211 OR1A2Q9Y585 309 aa6.46□□□□□ -1.38
CD44-214ENST00000525211 PIEZO1Q92508 2521 aa6.46□□□□□ -1.38
CD44-214ENST00000525211 CEP192Q8TEP8 1941 aa6.46□□□□□ -1.38
CD44-214ENST00000525211 LAMA1P25391 3075 aa6.46□□□□□ -1.38
CD44-214ENST00000525211 PLXNB3Q9ULL4 1909 aa6.45□□□□□ -1.38
CD44-214ENST00000525211 TMEM202A6NGA9 273 aa6.45□□□□□ -1.38
CD44-214ENST00000525211 LRRC72A6NJI9 287 aa6.45□□□□□ -1.38
CD44-214ENST00000525211 ERI2A8K979 691 aaKnown RBP6.45□□□□□ -1.38
CD44-214ENST00000525211 CXorf49A8MYA2 514 aaPredicted RBP6.45□□□□□ -1.38
CD44-214ENST00000525211 ERVH48-1M5A8F1 160 aa6.45□□□□□ -1.38
CD44-214ENST00000525211 INPP4BO15327 924 aa6.45□□□□□ -1.38
CD44-214ENST00000525211 SGTAO43765 313 aa6.45□□□□□ -1.38
CD44-214ENST00000525211 NDUFS2O75306 463 aa6.45□□□□□ -1.38
CD44-214ENST00000525211 TM7SF2O76062 418 aa6.45□□□□□ -1.38
CD44-214ENST00000525211 DKK1O94907 266 aa6.45□□□□□ -1.38
CD44-214ENST00000525211 GOT2P00505 430 aaKnown RBP6.45□□□□□ -1.38
CD44-214ENST00000525211 CYP2A6P11509 494 aaPredicted RBP6.45□□□□□ -1.38
CD44-214ENST00000525211 OXTRP30559 389 aa6.45□□□□□ -1.38
CD44-214ENST00000525211 FOXN2P32314 431 aa6.45□□□□□ -1.38
CD44-214ENST00000525211 ACTN2P35609 894 aa6.45□□□□□ -1.38
CD44-214ENST00000525211 ABCG1P45844 678 aa6.45□□□□□ -1.38
CD44-214ENST00000525211 ARCN1P48444 511 aaKnown RBP6.45□□□□□ -1.38
CD44-214ENST00000525211 POLD2P49005 469 aa6.45□□□□□ -1.38
CD44-214ENST00000525211 CSNK1EP49674 416 aaKnown RBP6.45□□□□□ -1.38
CD44-214ENST00000525211 ATP1A2P50993 1020 aa6.45□□□□□ -1.38
CD44-214ENST00000525211 DRG2P55039 364 aaKnown RBP6.45□□□□□ -1.38
CD44-214ENST00000525211 PFN3P60673 137 aa6.45□□□□□ -1.38
CD44-214ENST00000525211 POLR2LP62875 67 aaKnown RBP6.45□□□□□ -1.38
CD44-214ENST00000525211 RPS21P63220 83 aaKnown RBP6.45□□□□□ -1.38
CD44-214ENST00000525211 CDK16Q00536 496 aa6.45□□□□□ -1.38
CD44-214ENST00000525211 ELP6Q0PNE2 266 aa6.45□□□□□ -1.38
CD44-214ENST00000525211 PDIA2Q13087 525 aaKnown RBP6.45□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms