RNA–Protein interactions for RNA: ENST00000525121.2

HMGB1P40-201, Transcript of high mobility group box 1 pseudogene 40, humanhuman

BASIC

Gene HMGB1P40, Length 540 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P40-201ENST00000525121 RASGEF1CQ8N431 466 aa5.37□□□□□ -1.55
HMGB1P40-201ENST00000525121 TRAM1L1Q8N609 369 aa5.37□□□□□ -1.55
HMGB1P40-201ENST00000525121 PDCD7Q8N8D1 485 aaKnown RBP5.37□□□□□ -1.55
HMGB1P40-201ENST00000525121 OR4C6Q8NH72 309 aa5.37□□□□□ -1.55
HMGB1P40-201ENST00000525121 BRSK1Q8TDC3 778 aa5.37□□□□□ -1.55
HMGB1P40-201ENST00000525121 ACTRT1Q8TDG2 376 aa5.37□□□□□ -1.55
HMGB1P40-201ENST00000525121 GLYATL1Q969I3 302 aa5.37□□□□□ -1.55
HMGB1P40-201ENST00000525121 TBRG4Q969Z0 631 aaKnown RBP eCLIP5.37□□□□□ -1.55
HMGB1P40-201ENST00000525121 TSACCQ96A04 125 aaPredicted RBP5.37□□□□□ -1.55
HMGB1P40-201ENST00000525121 PDXPQ96GD0 296 aa5.37□□□□□ -1.55
HMGB1P40-201ENST00000525121 MS4A14Q96JA4 679 aa5.37□□□□□ -1.55
HMGB1P40-201ENST00000525121 CAMK1GQ96NX5 476 aa5.37□□□□□ -1.55
HMGB1P40-201ENST00000525121 SMIM14Q96QK8 99 aa5.37□□□□□ -1.55
HMGB1P40-201ENST00000525121 OR2M4Q96R27 311 aa5.37□□□□□ -1.55
HMGB1P40-201ENST00000525121 LRRC61Q9BV99 259 aa5.37□□□□□ -1.55
HMGB1P40-201ENST00000525121 AP1M1Q9BXS5 423 aa5.37□□□□□ -1.55
HMGB1P40-201ENST00000525121 GSDMCQ9BYG8 508 aa5.37□□□□□ -1.55
HMGB1P40-201ENST00000525121 RMI1Q9H9A7 625 aa5.37□□□□□ -1.55
HMGB1P40-201ENST00000525121 CARS2Q9HA77 564 aaKnown RBP5.37□□□□□ -1.55
HMGB1P40-201ENST00000525121 FGF22Q9HCT0 170 aa5.37□□□□□ -1.55
HMGB1P40-201ENST00000525121 BPIFA1Q9NP55 256 aa5.37□□□□□ -1.55
HMGB1P40-201ENST00000525121 EIF2B3Q9NR50 452 aaKnown RBP5.37□□□□□ -1.55
HMGB1P40-201ENST00000525121 VPS18Q9P253 973 aa5.37□□□□□ -1.55
HMGB1P40-201ENST00000525121 RNF14Q9UBS8 474 aa5.37□□□□□ -1.55
HMGB1P40-201ENST00000525121 APPL1Q9UKG1 709 aa5.37□□□□□ -1.55
HMGB1P40-201ENST00000525121 BTBD3Q9Y2F9 522 aa5.37□□□□□ -1.55
HMGB1P40-201ENST00000525121 SPO11Q9Y5K1 396 aa5.37□□□□□ -1.55
HMGB1P40-201ENST00000525121 SAR1BQ9Y6B6 198 aa5.37□□□□□ -1.55
HMGB1P40-201ENST00000525121 SLC30A1Q9Y6M5 507 aa5.37□□□□□ -1.55
HMGB1P40-201ENST00000525121 DGKBQ9Y6T7 804 aa5.37□□□□□ -1.55
HMGB1P40-201ENST00000525121 FAM186AA6NE01 2351 aa5.36□□□□□ -1.55
HMGB1P40-201ENST00000525121 GVINP1Q7Z2Y8 2422 aa5.36□□□□□ -1.55
HMGB1P40-201ENST00000525121 A0A0U1RQS6 177 aa5.36□□□□□ -1.55
HMGB1P40-201ENST00000525121 HEATR9A2RTY3 570 aa5.36□□□□□ -1.55
HMGB1P40-201ENST00000525121 TMEM202A6NGA9 273 aa5.36□□□□□ -1.55
HMGB1P40-201ENST00000525121 B4DGG1 531 aa5.36□□□□□ -1.55
HMGB1P40-201ENST00000525121 CFAP99D6REC4 459 aa5.36□□□□□ -1.55
HMGB1P40-201ENST00000525121 F8W8V4 182 aa5.36□□□□□ -1.55
HMGB1P40-201ENST00000525121 NDC80O14777 642 aa5.36□□□□□ -1.55
HMGB1P40-201ENST00000525121 ZW10O43264 779 aa5.36□□□□□ -1.55
HMGB1P40-201ENST00000525121 SIGLEC6O43699 453 aa5.36□□□□□ -1.55
HMGB1P40-201ENST00000525121 VEGFDO43915 354 aa5.36□□□□□ -1.55
HMGB1P40-201ENST00000525121 RFPL3O75679 317 aa5.36□□□□□ -1.55
HMGB1P40-201ENST00000525121 SUN1O94901 812 aa5.36□□□□□ -1.55
HMGB1P40-201ENST00000525121 PRAMEF1O95521 474 aa5.36□□□□□ -1.55
HMGB1P40-201ENST00000525121 KRT14P02533 472 aa5.36□□□□□ -1.55
HMGB1P40-201ENST00000525121 IVLP07476 585 aa5.36□□□□□ -1.55
HMGB1P40-201ENST00000525121 FTH1P19P0C7X4 201 aa5.36□□□□□ -1.55
HMGB1P40-201ENST00000525121 SLC2A4P14672 509 aa5.36□□□□□ -1.55
HMGB1P40-201ENST00000525121 BPIP17213 487 aa5.36□□□□□ -1.55
HMGB1P40-201ENST00000525121 CKMT2P17540 419 aa5.36□□□□□ -1.55
HMGB1P40-201ENST00000525121 GM2AP17900 193 aa5.36□□□□□ -1.55
HMGB1P40-201ENST00000525121 RPL22P35268 128 aaKnown RBP5.36□□□□□ -1.55
HMGB1P40-201ENST00000525121 ADRA1AP35348 466 aa5.36□□□□□ -1.55
HMGB1P40-201ENST00000525121 COILP38432 576 aaPredicted RBP5.36□□□□□ -1.55
HMGB1P40-201ENST00000525121 VPS41P49754 854 aa5.36□□□□□ -1.55
HMGB1P40-201ENST00000525121 GPS1Q13098 491 aa5.36□□□□□ -1.55
HMGB1P40-201ENST00000525121 ILKQ13418 452 aa5.36□□□□□ -1.55
HMGB1P40-201ENST00000525121 C1orf61Q13536 156 aa5.36□□□□□ -1.55
HMGB1P40-201ENST00000525121 LRP8Q14114 963 aa5.36□□□□□ -1.55
HMGB1P40-201ENST00000525121 SPARCL1Q14515 664 aa5.36□□□□□ -1.55
HMGB1P40-201ENST00000525121 POU6F1Q14863 301 aa5.36□□□□□ -1.55
HMGB1P40-201ENST00000525121 SIX1Q15475 284 aaPredicted RBP5.36□□□□□ -1.55
HMGB1P40-201ENST00000525121 CDKN3Q16667 212 aa5.36□□□□□ -1.55
HMGB1P40-201ENST00000525121 SKIDA1Q1XH10 827 aa5.36□□□□□ -1.55
HMGB1P40-201ENST00000525121 LDLRAP1Q5SW96 308 aa5.36□□□□□ -1.55
HMGB1P40-201ENST00000525121 TPRG1LQ5T0D9 272 aa5.36□□□□□ -1.55
HMGB1P40-201ENST00000525121 C6orf132Q5T0Z8 1188 aa5.36□□□□□ -1.55
HMGB1P40-201ENST00000525121 FAM182AQ5T1J6 154 aa5.36□□□□□ -1.55
HMGB1P40-201ENST00000525121 KCTD11Q693B1 232 aa5.36□□□□□ -1.55
HMGB1P40-201ENST00000525121 CCDC137Q6PK04 289 aaKnown RBP5.36□□□□□ -1.55
HMGB1P40-201ENST00000525121 FAM151BQ6UXP7 276 aa5.36□□□□□ -1.55
HMGB1P40-201ENST00000525121 KDM7AQ6ZMT4 941 aa5.36□□□□□ -1.55
HMGB1P40-201ENST00000525121 DBX2Q6ZNG2 339 aa5.36□□□□□ -1.55
HMGB1P40-201ENST00000525121 RFLNAQ6ZTI6 216 aa5.36□□□□□ -1.55
HMGB1P40-201ENST00000525121 SYDE1Q6ZW31 735 aaPredicted RBP5.36□□□□□ -1.55
HMGB1P40-201ENST00000525121 MARK2Q7KZI7 788 aaKnown RBP5.36□□□□□ -1.55
HMGB1P40-201ENST00000525121 NLRP9Q7RTR0 991 aa5.36□□□□□ -1.55
HMGB1P40-201ENST00000525121 TRIM74Q86UV6 250 aa5.36□□□□□ -1.55
HMGB1P40-201ENST00000525121 CBARPQ8N350 705 aaPredicted RBP5.36□□□□□ -1.55
HMGB1P40-201ENST00000525121 TTC30BQ8N4P2 665 aa5.36□□□□□ -1.55
HMGB1P40-201ENST00000525121 ARL10Q8N8L6 244 aa5.36□□□□□ -1.55
HMGB1P40-201ENST00000525121 PRELID2Q8N945 189 aa5.36□□□□□ -1.55
HMGB1P40-201ENST00000525121 GPR26Q8NDV2 337 aa5.36□□□□□ -1.55
HMGB1P40-201ENST00000525121 FAM46DQ8NEK8 389 aa5.36□□□□□ -1.55
HMGB1P40-201ENST00000525121 PPHLN1Q8NEY8 458 aaKnown RBP5.36□□□□□ -1.55
HMGB1P40-201ENST00000525121 OR4K2Q8NGD2 314 aa5.36□□□□□ -1.55
HMGB1P40-201ENST00000525121 OR6C4Q8NGE1 309 aa5.36□□□□□ -1.55
HMGB1P40-201ENST00000525121 COG1Q8WTW3 980 aa5.36□□□□□ -1.55
HMGB1P40-201ENST00000525121 HEXDCQ8WVB3 486 aa5.36□□□□□ -1.55
HMGB1P40-201ENST00000525121 OR1E3Q8WZA6 343 aa5.36□□□□□ -1.55
HMGB1P40-201ENST00000525121 NAT6Q93015 286 aa5.36□□□□□ -1.55
HMGB1P40-201ENST00000525121 ULK4Q96C45 1275 aa5.36□□□□□ -1.55
HMGB1P40-201ENST00000525121 DCUN1D1Q96GG9 259 aa5.36□□□□□ -1.55
HMGB1P40-201ENST00000525121 CAPZA3Q96KX2 299 aa5.36□□□□□ -1.55
HMGB1P40-201ENST00000525121 VPS35Q96QK1 796 aa5.36□□□□□ -1.55
HMGB1P40-201ENST00000525121 WDR24Q96S15 920 aa5.36□□□□□ -1.55
HMGB1P40-201ENST00000525121 TTC1Q99614 292 aa5.36□□□□□ -1.55
HMGB1P40-201ENST00000525121 C19orf43Q9BQ61 176 aa5.36□□□□□ -1.55
HMGB1P40-201ENST00000525121 LGR4Q9BXB1 951 aa5.36□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms