RNA–Protein interactions for RNA: ENST00000524955.1

CHMP4A-202, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 2

Gene CHMP4A, Length 268 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-202ENST00000524955 ZNF30P17039 623 aa4.57□□□□□ -1.68
CHMP4A-202ENST00000524955 JUNDP17535 347 aa4.57□□□□□ -1.68
CHMP4A-202ENST00000524955 LPOP22079 712 aaPredicted RBP4.57□□□□□ -1.68
CHMP4A-202ENST00000524955 AK4P27144 223 aaPredicted RBP4.57□□□□□ -1.68
CHMP4A-202ENST00000524955 PBLDP30039 288 aaPredicted RBP4.57□□□□□ -1.68
CHMP4A-202ENST00000524955 MC4RP32245 332 aa4.57□□□□□ -1.68
CHMP4A-202ENST00000524955 HMGCLP35914 325 aa4.57□□□□□ -1.68
CHMP4A-202ENST00000524955 SPAM1P38567 509 aa4.57□□□□□ -1.68
CHMP4A-202ENST00000524955 ABCG1P45844 678 aa4.57□□□□□ -1.68
CHMP4A-202ENST00000524955 GNPDA1P46926 289 aa4.57□□□□□ -1.68
CHMP4A-202ENST00000524955 SUOXP51687 545 aa4.57□□□□□ -1.68
CHMP4A-202ENST00000524955 ZNF140P52738 457 aaPredicted RBP4.57□□□□□ -1.68
CHMP4A-202ENST00000524955 CLDN6P56747 220 aa4.57□□□□□ -1.68
CHMP4A-202ENST00000524955 SRP54P61011 504 aaKnown RBP4.57□□□□□ -1.68
CHMP4A-202ENST00000524955 XIAPP98170 497 aa4.57□□□□□ -1.68
CHMP4A-202ENST00000524955 CDK3Q00526 305 aa4.57□□□□□ -1.68
CHMP4A-202ENST00000524955 LMNB2Q03252 620 aa4.57□□□□□ -1.68
CHMP4A-202ENST00000524955 PEX6Q13608 980 aa4.57□□□□□ -1.68
CHMP4A-202ENST00000524955 SEMA3AQ14563 771 aa4.57□□□□□ -1.68
CHMP4A-202ENST00000524955 NFATC4Q14934 902 aa4.57□□□□□ -1.68
CHMP4A-202ENST00000524955 FASTKD3Q14CZ7 662 aaKnown RBP4.57□□□□□ -1.68
CHMP4A-202ENST00000524955 SLC14A2Q15849 920 aa4.57□□□□□ -1.68
CHMP4A-202ENST00000524955 RSPO4Q2I0M5 234 aaPredicted RBP4.57□□□□□ -1.68
CHMP4A-202ENST00000524955 DEFB133Q30KQ1 61 aa4.57□□□□□ -1.68
CHMP4A-202ENST00000524955 BBS9Q3SYG4 887 aa4.57□□□□□ -1.68
CHMP4A-202ENST00000524955 ATP13A5Q4VNC0 1218 aa4.57□□□□□ -1.68
CHMP4A-202ENST00000524955 PRRT3Q5FWE3 981 aa4.57□□□□□ -1.68
CHMP4A-202ENST00000524955 SPDYCQ5MJ68 293 aa4.57□□□□□ -1.68
CHMP4A-202ENST00000524955 TSTD2Q5T7W7 516 aa4.57□□□□□ -1.68
CHMP4A-202ENST00000524955 HENMT1Q5T8I9 393 aaKnown RBP4.57□□□□□ -1.68
CHMP4A-202ENST00000524955 STPG1Q5TH74 334 aa4.57□□□□□ -1.68
CHMP4A-202ENST00000524955 PSAPL1Q6NUJ1 521 aa4.57□□□□□ -1.68
CHMP4A-202ENST00000524955 ESRP1Q6NXG1 681 aaKnown RBP4.57□□□□□ -1.68
CHMP4A-202ENST00000524955 CASC4Q6P4E1 433 aa4.57□□□□□ -1.68
CHMP4A-202ENST00000524955 NAPRTQ6XQN6 538 aa4.57□□□□□ -1.68
CHMP4A-202ENST00000524955 KYAT3Q6YP21 454 aaKnown RBP4.57□□□□□ -1.68
CHMP4A-202ENST00000524955 CAPN12Q6ZSI9 719 aa4.57□□□□□ -1.68
CHMP4A-202ENST00000524955 LINC00523Q86TU6 105 aa4.57□□□□□ -1.68
CHMP4A-202ENST00000524955 CAND1Q86VP6 1230 aaKnown RBP4.57□□□□□ -1.68
CHMP4A-202ENST00000524955 ANKMY2Q8IV38 441 aa4.57□□□□□ -1.68
CHMP4A-202ENST00000524955 IGDCC3Q8IVU1 814 aa4.57□□□□□ -1.68
CHMP4A-202ENST00000524955 PPIL6Q8IXY8 311 aa4.57□□□□□ -1.68
CHMP4A-202ENST00000524955 PHACTR4Q8IZ21 702 aa4.57□□□□□ -1.68
CHMP4A-202ENST00000524955 UNC5BQ8IZJ1 945 aa4.57□□□□□ -1.68
CHMP4A-202ENST00000524955 EID2Q8N6I1 236 aa4.57□□□□□ -1.68
CHMP4A-202ENST00000524955 BEND7Q8N7W2 519 aaPredicted RBP4.57□□□□□ -1.68
CHMP4A-202ENST00000524955 NAT8LQ8N9F0 302 aa4.57□□□□□ -1.68
CHMP4A-202ENST00000524955 DEFB124Q8NES8 71 aa4.57□□□□□ -1.68
CHMP4A-202ENST00000524955 OR56A4Q8NGH8 313 aa4.57□□□□□ -1.68
CHMP4A-202ENST00000524955 OR6P1Q8NGX9 317 aa4.57□□□□□ -1.68
CHMP4A-202ENST00000524955 CEP76Q8TAP6 659 aa4.57□□□□□ -1.68
CHMP4A-202ENST00000524955 ZNF398Q8TD17 642 aa4.57□□□□□ -1.68
CHMP4A-202ENST00000524955 BRSK1Q8TDC3 778 aa4.57□□□□□ -1.68
CHMP4A-202ENST00000524955 GRK7Q8WTQ7 553 aa4.57□□□□□ -1.68
CHMP4A-202ENST00000524955 SETD7Q8WTS6 366 aaKnown RBP4.57□□□□□ -1.68
CHMP4A-202ENST00000524955 ASB12Q8WXK4 309 aa4.57□□□□□ -1.68
CHMP4A-202ENST00000524955 SPOCK2Q92563 424 aa4.57□□□□□ -1.68
CHMP4A-202ENST00000524955 HDAC10Q969S8 669 aa4.57□□□□□ -1.68
CHMP4A-202ENST00000524955 CFAP36Q96G28 342 aa4.57□□□□□ -1.68
CHMP4A-202ENST00000524955 WDR92Q96MX6 357 aa4.57□□□□□ -1.68
CHMP4A-202ENST00000524955 FCRL3Q96P31 734 aaPredicted RBP4.57□□□□□ -1.68
CHMP4A-202ENST00000524955 ELF4Q99607 663 aaPredicted RBP4.57□□□□□ -1.68
CHMP4A-202ENST00000524955 RHOXF2Q9BQY4 288 aa4.57□□□□□ -1.68
CHMP4A-202ENST00000524955 BOCQ9BWV1 1114 aa4.57□□□□□ -1.68
CHMP4A-202ENST00000524955 TEX101Q9BY14 249 aa4.57□□□□□ -1.68
CHMP4A-202ENST00000524955 CLPBQ9H078 707 aa4.57□□□□□ -1.68
CHMP4A-202ENST00000524955 TMEM168Q9H0V1 697 aa4.57□□□□□ -1.68
CHMP4A-202ENST00000524955 OR2AG1Q9H205 316 aa4.57□□□□□ -1.68
CHMP4A-202ENST00000524955 ASB8Q9H765 288 aa4.57□□□□□ -1.68
CHMP4A-202ENST00000524955 CARS2Q9HA77 564 aaKnown RBP4.57□□□□□ -1.68
CHMP4A-202ENST00000524955 ARNT2Q9HBZ2 717 aa4.57□□□□□ -1.68
CHMP4A-202ENST00000524955 TMEM9BQ9NQ34 198 aa4.57□□□□□ -1.68
CHMP4A-202ENST00000524955 GDF3Q9NR23 364 aa4.57□□□□□ -1.68
CHMP4A-202ENST00000524955 SIRPGQ9P1W8 387 aa4.57□□□□□ -1.68
CHMP4A-202ENST00000524955 MARCH4Q9P2E8 410 aaPredicted RBP4.57□□□□□ -1.68
CHMP4A-202ENST00000524955 SLC17A6Q9P2U8 582 aa4.57□□□□□ -1.68
CHMP4A-202ENST00000524955 ATXN10Q9UBB4 475 aa4.57□□□□□ -1.68
CHMP4A-202ENST00000524955 KLQ9UEF7 1012 aa4.57□□□□□ -1.68
CHMP4A-202ENST00000524955 PCYOX1Q9UHG3 505 aa4.57□□□□□ -1.68
CHMP4A-202ENST00000524955 ZNHIT2Q9UHR6 403 aa4.57□□□□□ -1.68
CHMP4A-202ENST00000524955 ANAPC5Q9UJX4 755 aa4.57□□□□□ -1.68
CHMP4A-202ENST00000524955 TPX2Q9ULW0 747 aaKnown RBP4.57□□□□□ -1.68
CHMP4A-202ENST00000524955 SUFUQ9UMX1 484 aa4.57□□□□□ -1.68
CHMP4A-202ENST00000524955 PKP3Q9Y446 797 aa4.57□□□□□ -1.68
CHMP4A-202ENST00000524955 GPSM3Q9Y4H4 160 aa4.57□□□□□ -1.68
CHMP4A-202ENST00000524955 ST14Q9Y5Y6 855 aa4.57□□□□□ -1.68
CHMP4A-202ENST00000524955 HS3ST3A1Q9Y663 406 aa4.57□□□□□ -1.68
CHMP4A-202ENST00000524955 NUMA1Q14980 2115 aa4.57□□□□□ -1.68
CHMP4A-202ENST00000524955 VPS13AQ96RL7 3174 aa4.57□□□□□ -1.68
CHMP4A-202ENST00000524955 MYO18AQ92614 2054 aaKnown RBP4.57□□□□□ -1.68
CHMP4A-202ENST00000524955 PLXNA2O75051 1894 aa4.56□□□□□ -1.68
CHMP4A-202ENST00000524955 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP4.56□□□□□ -1.68
CHMP4A-202ENST00000524955 A0A1B0GTQ1 180 aa4.56□□□□□ -1.68
CHMP4A-202ENST00000524955 SPAARA0A1B0GVQ0 90 aa4.56□□□□□ -1.68
CHMP4A-202ENST00000524955 PRSS38A1L453 326 aa4.56□□□□□ -1.68
CHMP4A-202ENST00000524955 CTAGE15A4D2H0 777 aa4.56□□□□□ -1.68
CHMP4A-202ENST00000524955 MROH6A6NGR9 719 aa4.56□□□□□ -1.68
CHMP4A-202ENST00000524955 PSMD11O00231 422 aa4.56□□□□□ -1.68
CHMP4A-202ENST00000524955 CACNB4O00305 520 aaPredicted RBP4.56□□□□□ -1.68
CHMP4A-202ENST00000524955 TRIM38O00635 465 aa4.56□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms