RNA–Protein interactions for RNA: ENST00000523441.1

SDCBP-211, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 543 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-211ENST00000523441 WDR74Q6RFH5 385 aaPredicted RBP11.55□□□□□ -0.56
SDCBP-211ENST00000523441 UMODL1-AS1Q8N2C9 162 aa11.55□□□□□ -0.56
SDCBP-211ENST00000523441 TTC30BQ8N4P2 665 aa11.55□□□□□ -0.56
SDCBP-211ENST00000523441 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP11.55□□□□□ -0.56
SDCBP-211ENST00000523441 CT55Q8WUE5 264 aa11.55□□□□□ -0.56
SDCBP-211ENST00000523441 SCAMP4Q969E2 229 aa11.55□□□□□ -0.56
SDCBP-211ENST00000523441 ECHDC3Q96DC8 303 aa11.55□□□□□ -0.56
SDCBP-211ENST00000523441 DTD2Q96FN9 168 aa11.55□□□□□ -0.56
SDCBP-211ENST00000523441 TCTN2Q96GX1 697 aa11.55□□□□□ -0.56
SDCBP-211ENST00000523441 TIGD1Q96MW7 591 aa11.55□□□□□ -0.56
SDCBP-211ENST00000523441 SMIM14Q96QK8 99 aa11.55□□□□□ -0.56
SDCBP-211ENST00000523441 ZNF768Q9H5H4 540 aaKnown RBP11.55□□□□□ -0.56
SDCBP-211ENST00000523441 SLAMF7Q9NQ25 335 aa11.55□□□□□ -0.56
SDCBP-211ENST00000523441 SEPT11Q9NVA2 429 aaKnown RBP11.55□□□□□ -0.56
SDCBP-211ENST00000523441 CUEDC1Q9NWM3 386 aaPredicted RBP11.55□□□□□ -0.56
SDCBP-211ENST00000523441 ERRFI1Q9UJM3 462 aaPredicted RBP11.55□□□□□ -0.56
SDCBP-211ENST00000523441 FZD10Q9ULW2 581 aa11.55□□□□□ -0.56
SDCBP-211ENST00000523441 SLC17A4Q9Y2C5 497 aa11.55□□□□□ -0.56
SDCBP-211ENST00000523441 MAP4K5Q9Y4K4 846 aa11.55□□□□□ -0.56
SDCBP-211ENST00000523441 PCYT1BQ9Y5K3 369 aaPredicted RBP11.55□□□□□ -0.56
SDCBP-211ENST00000523441 HIVEP3Q5T1R4 2406 aa11.55□□□□□ -0.56
SDCBP-211ENST00000523441 NPIPB15A6NHN6 443 aaPredicted RBP11.54□□□□□ -0.56
SDCBP-211ENST00000523441 A6NL46 340 aa11.54□□□□□ -0.56
SDCBP-211ENST00000523441 TRAFD1O14545 582 aaPredicted RBP11.54□□□□□ -0.56
SDCBP-211ENST00000523441 CREG1O75629 220 aa11.54□□□□□ -0.56
SDCBP-211ENST00000523441 DDAH2O95865 285 aa11.54□□□□□ -0.56
SDCBP-211ENST00000523441 IVLP07476 585 aa11.54□□□□□ -0.56
SDCBP-211ENST00000523441 ACP5P13686 325 aa11.54□□□□□ -0.56
SDCBP-211ENST00000523441 LHCGRP22888 699 aa11.54□□□□□ -0.56
SDCBP-211ENST00000523441 FASLGP48023 281 aa11.54□□□□□ -0.56
SDCBP-211ENST00000523441 DNASE1L3Q13609 305 aa11.54□□□□□ -0.56
SDCBP-211ENST00000523441 PYCR3Q53H96 274 aa11.54□□□□□ -0.56
SDCBP-211ENST00000523441 CHCHD2P9Q5T1J5 151 aaPredicted RBP11.54□□□□□ -0.56
SDCBP-211ENST00000523441 FAM199XQ6PEV8 388 aaPredicted RBP11.54□□□□□ -0.56
SDCBP-211ENST00000523441 WDR59Q6PJI9 974 aa11.54□□□□□ -0.56
SDCBP-211ENST00000523441 TP53INP2Q8IXH6 220 aa11.54□□□□□ -0.56
SDCBP-211ENST00000523441 SFRP1Q8N474 314 aa11.54□□□□□ -0.56
SDCBP-211ENST00000523441 EPS8L1Q8TE68 723 aa11.54□□□□□ -0.56
SDCBP-211ENST00000523441 NTAN1Q96AB6 310 aa11.54□□□□□ -0.56
SDCBP-211ENST00000523441 AP2M1Q96CW1 435 aa11.54□□□□□ -0.56
SDCBP-211ENST00000523441 C19orf60Q96EN9 201 aa11.54□□□□□ -0.56
SDCBP-211ENST00000523441 AGAP2Q99490 1192 aa11.54□□□□□ -0.56
SDCBP-211ENST00000523441 ACTL8Q9H568 366 aa11.54□□□□□ -0.56
SDCBP-211ENST00000523441 LRRC19Q9H756 370 aa11.54□□□□□ -0.56
SDCBP-211ENST00000523441 ACSS2Q9NR19 701 aa11.54□□□□□ -0.56
SDCBP-211ENST00000523441 PDP2Q9P2J9 529 aa11.54□□□□□ -0.56
SDCBP-211ENST00000523441 TBC1D29Q9UFV1 150 aa11.54□□□□□ -0.56
SDCBP-211ENST00000523441 ARHGAP10A1A4S6 786 aa11.53□□□□□ -0.56
SDCBP-211ENST00000523441 GTPBP10A4D1E9 387 aaKnown RBP11.53□□□□□ -0.56
SDCBP-211ENST00000523441 EEF2KO00418 725 aaKnown RBP11.53□□□□□ -0.56
SDCBP-211ENST00000523441 FGF10O15520 208 aaPredicted RBP11.53□□□□□ -0.56
SDCBP-211ENST00000523441 CYP2A6P11509 494 aaPredicted RBP11.53□□□□□ -0.56
SDCBP-211ENST00000523441 AMD1P17707 334 aa11.53□□□□□ -0.56
SDCBP-211ENST00000523441 MMP8P22894 467 aa11.53□□□□□ -0.56
SDCBP-211ENST00000523441 ELAVL4P26378 380 aaKnown RBP11.53□□□□□ -0.56
SDCBP-211ENST00000523441 LEPRP48357 1165 aaKnown RBP11.53□□□□□ -0.56
SDCBP-211ENST00000523441 MAXP61244 160 aa11.53□□□□□ -0.56
SDCBP-211ENST00000523441 SLC10A7Q0GE19 358 aa11.53□□□□□ -0.56
SDCBP-211ENST00000523441 SEMA5AQ13591 1074 aa11.53□□□□□ -0.56
SDCBP-211ENST00000523441 RAPSNQ13702 412 aa11.53□□□□□ -0.56
SDCBP-211ENST00000523441 ZNF235Q14590 738 aa11.53□□□□□ -0.56
SDCBP-211ENST00000523441 NR6A1Q15406 480 aa11.53□□□□□ -0.56
SDCBP-211ENST00000523441 CA9Q16790 459 aa11.53□□□□□ -0.56
SDCBP-211ENST00000523441 CRTC2Q53ET0 693 aaPredicted RBP11.53□□□□□ -0.56
SDCBP-211ENST00000523441 TMCO4Q5TGY1 634 aa11.53□□□□□ -0.56
SDCBP-211ENST00000523441 KLHDC7AQ5VTJ3 777 aa11.53□□□□□ -0.56
SDCBP-211ENST00000523441 FAM92BQ6ZTR7 304 aa11.53□□□□□ -0.56
SDCBP-211ENST00000523441 ARCQ7LC44 396 aa11.53□□□□□ -0.56
SDCBP-211ENST00000523441 CENPIQ92674 756 aaPredicted RBP11.53□□□□□ -0.56
SDCBP-211ENST00000523441 MCEEQ96PE7 176 aa11.53□□□□□ -0.56
SDCBP-211ENST00000523441 SLC29A3Q9BZD2 475 aa11.53□□□□□ -0.56
SDCBP-211ENST00000523441 ABCG8Q9H221 673 aa11.53□□□□□ -0.56
SDCBP-211ENST00000523441 VPS16Q9H269 839 aa11.53□□□□□ -0.56
SDCBP-211ENST00000523441 NDST4Q9H3R1 872 aa11.53□□□□□ -0.56
SDCBP-211ENST00000523441 OSGEPL1Q9H4B0 414 aa11.53□□□□□ -0.56
SDCBP-211ENST00000523441 DHX35Q9H5Z1 703 aaKnown RBP11.53□□□□□ -0.56
SDCBP-211ENST00000523441 ARFGAP3Q9NP61 516 aa11.53□□□□□ -0.56
SDCBP-211ENST00000523441 SIDT1Q9NXL6 827 aaKnown RBP11.53□□□□□ -0.56
SDCBP-211ENST00000523441 ADAM22Q9P0K1 906 aa11.53□□□□□ -0.56
SDCBP-211ENST00000523441 KIAA1468Q9P260 1216 aa11.53□□□□□ -0.56
SDCBP-211ENST00000523441 RWDD2AQ9UIY3 292 aa11.53□□□□□ -0.56
SDCBP-211ENST00000523441 CSMD1Q96PZ7 3565 aa11.53□□□□□ -0.56
SDCBP-211ENST00000523441 FBN2P35556 2912 aa11.53□□□□□ -0.56
SDCBP-211ENST00000523441 ANKRD62A6NC57 917 aa11.52□□□□□ -0.57
SDCBP-211ENST00000523441 WASH4PA8MWX3 477 aa11.52□□□□□ -0.57
SDCBP-211ENST00000523441 F5H423 210 aaPredicted RBP11.52□□□□□ -0.57
SDCBP-211ENST00000523441 KIF1CO43896 1103 aaKnown RBP11.52□□□□□ -0.57
SDCBP-211ENST00000523441 SPAG6O75602 509 aa11.52□□□□□ -0.57
SDCBP-211ENST00000523441 CHRNB2P17787 502 aa11.52□□□□□ -0.57
SDCBP-211ENST00000523441 CSNK1DP48730 415 aa11.52□□□□□ -0.57
SDCBP-211ENST00000523441 NDST2P52849 883 aa11.52□□□□□ -0.57
SDCBP-211ENST00000523441 AP1S1P61966 158 aa11.52□□□□□ -0.57
SDCBP-211ENST00000523441 FMO1Q01740 532 aa11.52□□□□□ -0.57
SDCBP-211ENST00000523441 TRAF2Q12933 501 aa11.52□□□□□ -0.57
SDCBP-211ENST00000523441 MAP7Q14244 749 aa11.52□□□□□ -0.57
SDCBP-211ENST00000523441 LBRQ14739 615 aaKnown RBP11.52□□□□□ -0.57
SDCBP-211ENST00000523441 SEPT7Q16181 437 aaKnown RBP11.52□□□□□ -0.57
SDCBP-211ENST00000523441 CAMK4Q16566 473 aa11.52□□□□□ -0.57
SDCBP-211ENST00000523441 MAN2A1Q16706 1144 aa11.52□□□□□ -0.57
SDCBP-211ENST00000523441 PLA2G4EQ3MJ16 856 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms