RNA–Protein interactions for RNA: ENST00000523125.5

VEGFA-223, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 541 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-223ENST00000523125 GSDMCQ9BYG8 508 aa12.31□□□□□ -0.44
VEGFA-223ENST00000523125 FOXP3Q9BZS1 431 aa12.31□□□□□ -0.44
VEGFA-223ENST00000523125 THSD1Q9NS62 852 aa12.31□□□□□ -0.44
VEGFA-223ENST00000523125 DNPEPQ9ULA0 475 aa12.31□□□□□ -0.44
VEGFA-223ENST00000523125 ATXN7L1Q9ULK2 861 aaPredicted RBP12.31□□□□□ -0.44
VEGFA-223ENST00000523125 SSUH2Q9Y2M2 353 aa12.31□□□□□ -0.44
VEGFA-223ENST00000523125 PCYT1BQ9Y5K3 369 aaPredicted RBP12.31□□□□□ -0.44
VEGFA-223ENST00000523125 ALG6Q9Y672 507 aa12.31□□□□□ -0.44
VEGFA-223ENST00000523125 SMG1Q96Q15 3661 aaKnown RBP12.31□□□□□ -0.44
VEGFA-223ENST00000523125 FADS2P1A8MWK0 482 aa12.3□□□□□ -0.44
VEGFA-223ENST00000523125 INPP4BO15327 924 aa12.3□□□□□ -0.44
VEGFA-223ENST00000523125 B4GAT1O43505 415 aa12.3□□□□□ -0.44
VEGFA-223ENST00000523125 SPOPO43791 374 aa12.3□□□□□ -0.44
VEGFA-223ENST00000523125 TNFSF15O95150 251 aa12.3□□□□□ -0.44
VEGFA-223ENST00000523125 ECEL1O95672 775 aa12.3□□□□□ -0.44
VEGFA-223ENST00000523125 PECAM1P16284 738 aaPredicted RBP12.3□□□□□ -0.44
VEGFA-223ENST00000523125 CCKBRP32239 447 aa12.3□□□□□ -0.44
VEGFA-223ENST00000523125 ZFP36L1Q07352 338 aaKnown RBP12.3□□□□□ -0.44
VEGFA-223ENST00000523125 GALNT3Q14435 633 aa12.3□□□□□ -0.44
VEGFA-223ENST00000523125 PRKD1Q15139 912 aaPredicted RBP12.3□□□□□ -0.44
VEGFA-223ENST00000523125 LLGL1Q15334 1064 aa12.3□□□□□ -0.44
VEGFA-223ENST00000523125 PYCR3Q53H96 274 aa12.3□□□□□ -0.44
VEGFA-223ENST00000523125 HENMT1Q5T8I9 393 aaKnown RBP12.3□□□□□ -0.44
VEGFA-223ENST00000523125 SLC30A9Q6PML9 568 aa12.3□□□□□ -0.44
VEGFA-223ENST00000523125 LYSMD3Q7Z3D4 306 aa12.3□□□□□ -0.44
VEGFA-223ENST00000523125 CLEC14AQ86T13 490 aa12.3□□□□□ -0.44
VEGFA-223ENST00000523125 NT5DC3Q86UY8 548 aa12.3□□□□□ -0.44
VEGFA-223ENST00000523125 NAGSQ8N159 534 aa12.3□□□□□ -0.44
VEGFA-223ENST00000523125 ARL14Q8N4G2 192 aa12.3□□□□□ -0.44
VEGFA-223ENST00000523125 EXD1Q8NHP7 514 aa12.3□□□□□ -0.44
VEGFA-223ENST00000523125 KIAA1524Q8TCG1 905 aa12.3□□□□□ -0.44
VEGFA-223ENST00000523125 ZDHHC1Q8WTX9 485 aa12.3□□□□□ -0.44
VEGFA-223ENST00000523125 ADGRE3Q9BY15 652 aa12.3□□□□□ -0.44
VEGFA-223ENST00000523125 BRD8Q9H0E9 1235 aa12.3□□□□□ -0.44
VEGFA-223ENST00000523125 SLC25A51Q9H1U9 297 aa12.3□□□□□ -0.44
VEGFA-223ENST00000523125 PCDHA13Q9Y5I0 950 aa12.3□□□□□ -0.44
VEGFA-223ENST00000523125 OAS3Q9Y6K5 1087 aaKnown RBP12.3□□□□□ -0.44
VEGFA-223ENST00000523125 PPP1R12AO14974 1030 aaPredicted RBP12.29□□□□□ -0.44
VEGFA-223ENST00000523125 PSTPIP1O43586 416 aa12.29□□□□□ -0.44
VEGFA-223ENST00000523125 CST8O60676 142 aa12.29□□□□□ -0.44
VEGFA-223ENST00000523125 DNAJC6O75061 913 aa12.29□□□□□ -0.44
VEGFA-223ENST00000523125 MT-CYBP00156 380 aaPredicted RBP12.29□□□□□ -0.44
VEGFA-223ENST00000523125 ATP1A1P05023 1023 aaKnown RBP12.29□□□□□ -0.44
VEGFA-223ENST00000523125 PYGLP06737 847 aa12.29□□□□□ -0.44
VEGFA-223ENST00000523125 PTPN3P26045 913 aa12.29□□□□□ -0.44
VEGFA-223ENST00000523125 RBMS1P29558 406 aaKnown RBP12.29□□□□□ -0.44
VEGFA-223ENST00000523125 MLLT3P42568 568 aaPredicted RBP12.29□□□□□ -0.44
VEGFA-223ENST00000523125 MARCKSL1P49006 195 aa12.29□□□□□ -0.44
VEGFA-223ENST00000523125 NR2C2P49116 596 aa12.29□□□□□ -0.44
VEGFA-223ENST00000523125 INHBCP55103 352 aa12.29□□□□□ -0.44
VEGFA-223ENST00000523125 WASHC5Q12768 1159 aa12.29□□□□□ -0.44
VEGFA-223ENST00000523125 NR1D2Q14995 579 aa12.29□□□□□ -0.44
VEGFA-223ENST00000523125 SLC14A2Q15849 920 aa12.29□□□□□ -0.44
VEGFA-223ENST00000523125 TEX44Q53QW1 395 aa12.29□□□□□ -0.44
VEGFA-223ENST00000523125 FOXR1Q6PIV2 292 aa12.29□□□□□ -0.44
VEGFA-223ENST00000523125 SPOCD1Q6ZMY3 1216 aa12.29□□□□□ -0.44
VEGFA-223ENST00000523125 MARK2Q7KZI7 788 aaKnown RBP12.29□□□□□ -0.44
VEGFA-223ENST00000523125 RAB11FIP2Q7L804 512 aa12.29□□□□□ -0.44
VEGFA-223ENST00000523125 KDELC2Q7Z4H8 507 aa12.29□□□□□ -0.44
VEGFA-223ENST00000523125 SLITRK4Q8IW52 837 aa12.29□□□□□ -0.44
VEGFA-223ENST00000523125 CCDC170Q8IYT3 715 aa12.29□□□□□ -0.44
VEGFA-223ENST00000523125 SPATA22Q8NHS9 363 aa12.29□□□□□ -0.44
VEGFA-223ENST00000523125 TEKT5Q96M29 485 aa12.29□□□□□ -0.44
VEGFA-223ENST00000523125 OR2M4Q96R27 311 aa12.29□□□□□ -0.44
VEGFA-223ENST00000523125 CDH19Q9H159 772 aa12.29□□□□□ -0.44
VEGFA-223ENST00000523125 FAM83DQ9H4H8 585 aa12.29□□□□□ -0.44
VEGFA-223ENST00000523125 GLOD4Q9HC38 313 aa12.29□□□□□ -0.44
VEGFA-223ENST00000523125 EPB41L5Q9HCM4 733 aa12.29□□□□□ -0.44
VEGFA-223ENST00000523125 SEPT10Q9P0V9 454 aa12.29□□□□□ -0.44
VEGFA-223ENST00000523125 ZNF106Q9H2Y7 1883 aaKnown RBP12.29□□□□□ -0.44
VEGFA-223ENST00000523125 ATRXP46100 2492 aa12.28□□□□□ -0.44
VEGFA-223ENST00000523125 A0A0A6YYK5 440 aaPredicted RBP12.28□□□□□ -0.44
VEGFA-223ENST00000523125 RGSL1A5PLK6 1076 aa12.28□□□□□ -0.44
VEGFA-223ENST00000523125 RCCD1A6NED2 376 aa12.28□□□□□ -0.44
VEGFA-223ENST00000523125 TMX2-CTNND1H3BSU7 103 aa12.28□□□□□ -0.44
VEGFA-223ENST00000523125 PLD2O14939 933 aa12.28□□□□□ -0.44
VEGFA-223ENST00000523125 PPM1DO15297 605 aa12.28□□□□□ -0.44
VEGFA-223ENST00000523125 EML2O95834 649 aa12.28□□□□□ -0.44
VEGFA-223ENST00000523125 ITGA2BP08514 1039 aa12.28□□□□□ -0.44
VEGFA-223ENST00000523125 PIRTP0C851 137 aa12.28□□□□□ -0.44
VEGFA-223ENST00000523125 FECHP22830 423 aa12.28□□□□□ -0.44
VEGFA-223ENST00000523125 CD68P34810 354 aaPredicted RBP12.28□□□□□ -0.44
VEGFA-223ENST00000523125 UGT1A5P35504 534 aa12.28□□□□□ -0.44
VEGFA-223ENST00000523125 ACTR1BP42025 376 aa12.28□□□□□ -0.44
VEGFA-223ENST00000523125 ZNF75DP51815 510 aa12.28□□□□□ -0.44
VEGFA-223ENST00000523125 OR1D5P58170 312 aa12.28□□□□□ -0.44
VEGFA-223ENST00000523125 ACTR1AP61163 376 aa12.28□□□□□ -0.44
VEGFA-223ENST00000523125 CDK18Q07002 472 aa12.28□□□□□ -0.44
VEGFA-223ENST00000523125 TFDP2Q14188 446 aa12.28□□□□□ -0.44
VEGFA-223ENST00000523125 ODF2Q5BJF6 829 aa12.28□□□□□ -0.44
VEGFA-223ENST00000523125 TFDP3Q5H9I0 405 aa12.28□□□□□ -0.44
VEGFA-223ENST00000523125 KAZNQ674X7 775 aa12.28□□□□□ -0.44
VEGFA-223ENST00000523125 ZNF574Q6ZN55 896 aaPredicted RBP12.28□□□□□ -0.44
VEGFA-223ENST00000523125 TMC3Q7Z5M5 1100 aa12.28□□□□□ -0.44
VEGFA-223ENST00000523125 KATNAL2Q8IYT4 538 aa12.28□□□□□ -0.44
VEGFA-223ENST00000523125 FBXO39Q8N4B4 442 aa12.28□□□□□ -0.44
VEGFA-223ENST00000523125 GPR26Q8NDV2 337 aa12.28□□□□□ -0.44
VEGFA-223ENST00000523125 KCNE4Q8WWG9 221 aa12.28□□□□□ -0.44
VEGFA-223ENST00000523125 KRT35Q92764 455 aa12.28□□□□□ -0.44
VEGFA-223ENST00000523125 TMEM74Q96NL1 305 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms