RNA–Protein interactions for RNA: ENST00000522387.5

PABPC1-219, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2 BASIC

Gene PABPC1, Length 2,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-219ENST00000522387 UGT1A10Q9HAW8 530 aa12.34□□□□□ -0.43
PABPC1-219ENST00000522387 UGT1A8Q9HAW9 530 aa12.34□□□□□ -0.43
PABPC1-219ENST00000522387 RPL26L1Q9UNX3 145 aaKnown RBP12.34□□□□□ -0.43
PABPC1-219ENST00000522387 ZCWPW2A0A1B0GU75 182 aa12.33□□□□□ -0.44
PABPC1-219ENST00000522387 TCRBV9S1A1TA0A576 114 aa12.33□□□□□ -0.44
PABPC1-219ENST00000522387 TSPAN11A1L157 253 aa12.33□□□□□ -0.44
PABPC1-219ENST00000522387 MROH6A6NGR9 719 aa12.33□□□□□ -0.44
PABPC1-219ENST00000522387 APBB3O95704 486 aa12.33□□□□□ -0.44
PABPC1-219ENST00000522387 TTC4O95801 387 aa12.33□□□□□ -0.44
PABPC1-219ENST00000522387 CYP2A6P11509 494 aaPredicted RBP12.33□□□□□ -0.44
PABPC1-219ENST00000522387 CA5AP35218 305 aa12.33□□□□□ -0.44
PABPC1-219ENST00000522387 SNCBQ16143 134 aa12.33□□□□□ -0.44
PABPC1-219ENST00000522387 TMEM135Q86UB9 458 aa12.33□□□□□ -0.44
PABPC1-219ENST00000522387 SPNS2Q8IVW8 549 aa12.33□□□□□ -0.44
PABPC1-219ENST00000522387 CTAGE3PQ8IX95 158 aa12.33□□□□□ -0.44
PABPC1-219ENST00000522387 CCDC197Q8NCU1 140 aa12.33□□□□□ -0.44
PABPC1-219ENST00000522387 SNX19Q92543 992 aa12.33□□□□□ -0.44
PABPC1-219ENST00000522387 FRMD8Q9BZ67 464 aaPredicted RBP12.33□□□□□ -0.44
PABPC1-219ENST00000522387 KDM4CQ9H3R0 1056 aa12.33□□□□□ -0.44
PABPC1-219ENST00000522387 C6orf106Q9H6K1 298 aaPredicted RBP12.33□□□□□ -0.44
PABPC1-219ENST00000522387 MLXIPLQ9NP71 852 aa12.33□□□□□ -0.44
PABPC1-219ENST00000522387 IL17CQ9P0M4 197 aa12.33□□□□□ -0.44
PABPC1-219ENST00000522387 ZFR2Q9UPR6 939 aaKnown RBP12.33□□□□□ -0.44
PABPC1-219ENST00000522387 CA5BQ9Y2D0 317 aa12.33□□□□□ -0.44
PABPC1-219ENST00000522387 A0A1W2PQU0 124 aa12.33□□□□□ -0.44
PABPC1-219ENST00000522387 K7ESF4 209 aa12.33□□□□□ -0.44
PABPC1-219ENST00000522387 LAMTOR5O43504 91 aa12.33□□□□□ -0.44
PABPC1-219ENST00000522387 MTX2O75431 263 aa12.33□□□□□ -0.44
PABPC1-219ENST00000522387 RECQL5O94762 991 aaPredicted RBP12.33□□□□□ -0.44
PABPC1-219ENST00000522387 GOT2P00505 430 aaKnown RBP12.33□□□□□ -0.44
PABPC1-219ENST00000522387 ARNTP27540 789 aa12.33□□□□□ -0.44
PABPC1-219ENST00000522387 ZNF140P52738 457 aaPredicted RBP12.33□□□□□ -0.44
PABPC1-219ENST00000522387 CSTF1Q05048 431 aaKnown RBP12.33□□□□□ -0.44
PABPC1-219ENST00000522387 ELP6Q0PNE2 266 aa12.33□□□□□ -0.44
PABPC1-219ENST00000522387 CTBP1Q13363 440 aa12.33□□□□□ -0.44
PABPC1-219ENST00000522387 ZRANB3Q5FWF4 1079 aa12.33□□□□□ -0.44
PABPC1-219ENST00000522387 DPPA4Q7L190 304 aa12.33□□□□□ -0.44
PABPC1-219ENST00000522387 C1orf210Q8IVY1 113 aa12.33□□□□□ -0.44
PABPC1-219ENST00000522387 DENND6AQ8IWF6 608 aa12.33□□□□□ -0.44
PABPC1-219ENST00000522387 CYP4X1Q8N118 509 aa12.33□□□□□ -0.44
PABPC1-219ENST00000522387 SERBP1Q8NC51 408 aaKnown RBP eCLIP12.33□□□□□ -0.442e-9■■■■□ 20.1
PABPC1-219ENST00000522387 CDKN2AIPNLQ96HQ2 116 aa12.33□□□□□ -0.44
PABPC1-219ENST00000522387 SGSM3Q96HU1 749 aa12.33□□□□□ -0.44
PABPC1-219ENST00000522387 ZNF317Q96PQ6 595 aaPredicted RBP12.33□□□□□ -0.44
PABPC1-219ENST00000522387 IL26Q9NPH9 171 aa12.33□□□□□ -0.44
PABPC1-219ENST00000522387 ITM2CQ9NQX7 267 aa12.33□□□□□ -0.44
PABPC1-219ENST00000522387 IARS2Q9NSE4 1012 aaKnown RBP12.33□□□□□ -0.44
PABPC1-219ENST00000522387 PPIL1Q9Y3C6 166 aa12.33□□□□□ -0.44
PABPC1-219ENST00000522387 FAM237BA0A1B0GVD1 139 aa12.32□□□□□ -0.44
PABPC1-219ENST00000522387 CCDC162PA2VCL2 907 aa12.32□□□□□ -0.44
PABPC1-219ENST00000522387 CXorf49A8MYA2 514 aaPredicted RBP12.32□□□□□ -0.44
PABPC1-219ENST00000522387 POC1B-GALNT4F8VUJ3 575 aa12.32□□□□□ -0.44
PABPC1-219ENST00000522387 AP3B1O00203 1094 aa12.32□□□□□ -0.44
PABPC1-219ENST00000522387 INPP4BO15327 924 aa12.32□□□□□ -0.44
PABPC1-219ENST00000522387 PLRG1O43660 514 aaKnown RBP12.32□□□□□ -0.44
PABPC1-219ENST00000522387 FAM155BO75949 473 aa12.32□□□□□ -0.44
PABPC1-219ENST00000522387 USP1O94782 785 aa12.32□□□□□ -0.44
PABPC1-219ENST00000522387 PRAMEF1O95521 474 aa12.32□□□□□ -0.44
PABPC1-219ENST00000522387 GM2AP17900 193 aa12.32□□□□□ -0.44
PABPC1-219ENST00000522387 MAOBP27338 520 aa12.32□□□□□ -0.44
PABPC1-219ENST00000522387 MC4RP32245 332 aa12.32□□□□□ -0.44
PABPC1-219ENST00000522387 FNTBP49356 437 aa12.32□□□□□ -0.44
PABPC1-219ENST00000522387 CCR3P51677 355 aa12.32□□□□□ -0.44
PABPC1-219ENST00000522387 FGL2Q14314 439 aa12.32□□□□□ -0.44
PABPC1-219ENST00000522387 KBTBD12Q3ZCT8 623 aa12.32□□□□□ -0.44
PABPC1-219ENST00000522387 ARMCX6Q7L4S7 300 aa12.32□□□□□ -0.44
PABPC1-219ENST00000522387 FUBP1Q96AE4 644 aaKnown RBP12.32□□□□□ -0.44
PABPC1-219ENST00000522387 FAM136AQ96C01 138 aa12.32□□□□□ -0.44
PABPC1-219ENST00000522387 CCDC97Q96F63 343 aaPredicted RBP12.32□□□□□ -0.44
PABPC1-219ENST00000522387 LYSMD1Q96S90 227 aa12.32□□□□□ -0.44
PABPC1-219ENST00000522387 RIOK2Q9BVS4 552 aaKnown RBP12.32□□□□□ -0.44
PABPC1-219ENST00000522387 SPATA16Q9BXB7 569 aa12.32□□□□□ -0.44
PABPC1-219ENST00000522387 SMYD2Q9NRG4 433 aa12.32□□□□□ -0.44
PABPC1-219ENST00000522387 TREX1Q9NSU2 369 aa12.32□□□□□ -0.44
PABPC1-219ENST00000522387 A0A1W2PQ67 120 aa12.32□□□□□ -0.44
PABPC1-219ENST00000522387 CCT8L1PA6NM43 557 aa12.32□□□□□ -0.44
PABPC1-219ENST00000522387 RNGTTO60942 597 aaKnown RBP12.32□□□□□ -0.44
PABPC1-219ENST00000522387 DNAJC8O75937 253 aaPredicted RBP12.32□□□□□ -0.44
PABPC1-219ENST00000522387 SPINT3P49223 89 aa12.32□□□□□ -0.44
PABPC1-219ENST00000522387 CLCN5P51795 746 aa12.32□□□□□ -0.44
PABPC1-219ENST00000522387 PGGT1BP53609 377 aa12.32□□□□□ -0.44
PABPC1-219ENST00000522387 PEX6Q13608 980 aa12.32□□□□□ -0.44
PABPC1-219ENST00000522387 LRRC14Q15048 493 aa12.32□□□□□ -0.44
PABPC1-219ENST00000522387 ZNF648Q5T619 568 aaPredicted RBP12.32□□□□□ -0.44
PABPC1-219ENST00000522387 PSAPL1Q6NUJ1 521 aa12.32□□□□□ -0.44
PABPC1-219ENST00000522387 TRMT10CQ7L0Y3 403 aaKnown RBP12.32□□□□□ -0.44
PABPC1-219ENST00000522387 TAS2R42Q7RTR8 314 aa12.32□□□□□ -0.44
PABPC1-219ENST00000522387 KBTBD6Q86V97 674 aa12.32□□□□□ -0.44
PABPC1-219ENST00000522387 TAX1BP1Q86VP1 789 aa12.32□□□□□ -0.44
PABPC1-219ENST00000522387 KCNMB4Q86W47 210 aa12.32□□□□□ -0.44
PABPC1-219ENST00000522387 PLA2G15Q8NCC3 412 aa12.32□□□□□ -0.44
PABPC1-219ENST00000522387 GSDMBQ8TAX9 411 aa12.32□□□□□ -0.44
PABPC1-219ENST00000522387 MGARPQ8TDB4 240 aa12.32□□□□□ -0.44
PABPC1-219ENST00000522387 STYXQ8WUJ0 223 aa12.32□□□□□ -0.44
PABPC1-219ENST00000522387 LRRC39Q96DD0 335 aa12.32□□□□□ -0.44
PABPC1-219ENST00000522387 FBRSQ9HAH7 460 aa12.32□□□□□ -0.44
PABPC1-219ENST00000522387 MARCH4Q9P2E8 410 aaPredicted RBP12.32□□□□□ -0.44
PABPC1-219ENST00000522387 PSAT1Q9Y617 370 aa12.32□□□□□ -0.44
PABPC1-219ENST00000522387 SLCO1B1Q9Y6L6 691 aa12.32□□□□□ -0.44
PABPC1-219ENST00000522387 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 82.8 ms