RNA–Protein interactions for RNA: ENST00000520878.5

CLK4-206, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 3,722 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-206ENST00000520878 CDK15Q96Q40 435 aa11.32□□□□□ -0.6
CLK4-206ENST00000520878 ACOX2Q99424 681 aa11.32□□□□□ -0.6
CLK4-206ENST00000520878 ABCB8Q9NUT2 735 aa11.32□□□□□ -0.6
CLK4-206ENST00000520878 SCOCQ9UIL1 159 aa11.32□□□□□ -0.6
CLK4-206ENST00000520878 VPS9D1Q9Y2B5 631 aa11.32□□□□□ -0.6
CLK4-206ENST00000520878 ZSWIM8A7E2V4 1837 aa11.31□□□□□ -0.6
CLK4-206ENST00000520878 LOC285095A0A1B0GVY8 99 aa11.31□□□□□ -0.6
CLK4-206ENST00000520878 MRASO14807 208 aa11.31□□□□□ -0.6
CLK4-206ENST00000520878 AZIN1O14977 448 aa11.31□□□□□ -0.6
CLK4-206ENST00000520878 CACNG3O60359 315 aa11.31□□□□□ -0.6
CLK4-206ENST00000520878 CCNT2O60583 730 aaKnown RBP11.31□□□□□ -0.6
CLK4-206ENST00000520878 PAPSS2O95340 614 aaPredicted RBP11.31□□□□□ -0.6
CLK4-206ENST00000520878 PRAMEF1O95521 474 aa11.31□□□□□ -0.6
CLK4-206ENST00000520878 HMGA1P17096 107 aaKnown RBP11.31□□□□□ -0.6
CLK4-206ENST00000520878 POLD2P49005 469 aa11.31□□□□□ -0.6
CLK4-206ENST00000520878 STK19P49842 368 aaPredicted RBP11.31□□□□□ -0.6
CLK4-206ENST00000520878 NKX3-2P78367 333 aa11.31□□□□□ -0.6
CLK4-206ENST00000520878 SULT2A1Q06520 285 aa11.31□□□□□ -0.6
CLK4-206ENST00000520878 EIF4EBP2Q13542 120 aaPredicted RBP11.31□□□□□ -0.6
CLK4-206ENST00000520878 ARHGEF7Q14155 803 aa11.31□□□□□ -0.6
CLK4-206ENST00000520878 MAPRE2Q15555 327 aa11.31□□□□□ -0.6
CLK4-206ENST00000520878 TAF1AQ15573 450 aaPredicted RBP11.31□□□□□ -0.6
CLK4-206ENST00000520878 WLSQ5T9L3 541 aa11.31□□□□□ -0.6
CLK4-206ENST00000520878 PAOXQ6QHF9 649 aa11.31□□□□□ -0.6
CLK4-206ENST00000520878 ISCA2Q86U28 154 aa11.31□□□□□ -0.6
CLK4-206ENST00000520878 CLYBLQ8N0X4 340 aa11.31□□□□□ -0.6
CLK4-206ENST00000520878 FBXW8Q8N3Y1 598 aa11.31□□□□□ -0.6
CLK4-206ENST00000520878 PIP4K2CQ8TBX8 421 aa11.31□□□□□ -0.6
CLK4-206ENST00000520878 METTL6Q8TCB7 284 aa11.31□□□□□ -0.6
CLK4-206ENST00000520878 MYCBPQ99417 103 aaPredicted RBP11.31□□□□□ -0.6
CLK4-206ENST00000520878 SLC39A3Q9BRY0 314 aa11.31□□□□□ -0.6
CLK4-206ENST00000520878 MCM8Q9UJA3 840 aa11.31□□□□□ -0.6
CLK4-206ENST00000520878 BACE2Q9Y5Z0 518 aa11.31□□□□□ -0.6
CLK4-206ENST00000520878 A0A088AWK7 358 aa11.31□□□□□ -0.6
CLK4-206ENST00000520878 SYCE1LA8MT33 242 aa11.31□□□□□ -0.6
CLK4-206ENST00000520878 FGF18O76093 207 aa11.31□□□□□ -0.6
CLK4-206ENST00000520878 CLDN7O95471 211 aa11.31□□□□□ -0.6
CLK4-206ENST00000520878 UGT2B4P06133 528 aa11.31□□□□□ -0.6
CLK4-206ENST00000520878 NNMTP40261 264 aa11.31□□□□□ -0.6
CLK4-206ENST00000520878 AGTR2P50052 363 aa11.31□□□□□ -0.6
CLK4-206ENST00000520878 ACTR3P61158 418 aa11.31□□□□□ -0.6
CLK4-206ENST00000520878 ACBD5Q5T8D3 534 aaPredicted RBP11.31□□□□□ -0.6
CLK4-206ENST00000520878 AFMIDQ63HM1 303 aa11.31□□□□□ -0.6
CLK4-206ENST00000520878 KDM1BQ8NB78 822 aa11.31□□□□□ -0.6
CLK4-206ENST00000520878 KREMEN2Q8NCW0 462 aa11.31□□□□□ -0.6
CLK4-206ENST00000520878 BHLHE22Q8NFJ8 381 aaPredicted RBP11.31□□□□□ -0.6
CLK4-206ENST00000520878 EEF1AKMT1Q8WVE0 214 aa11.31□□□□□ -0.6
CLK4-206ENST00000520878 ING5Q8WYH8 240 aa11.31□□□□□ -0.6
CLK4-206ENST00000520878 SPDL1Q96EA4 605 aa11.31□□□□□ -0.6
CLK4-206ENST00000520878 RTKNQ9BST9 563 aa11.31□□□□□ -0.6
CLK4-206ENST00000520878 AARSD1Q9BTE6 412 aaKnown RBP11.31□□□□□ -0.6
CLK4-206ENST00000520878 BBS2Q9BXC9 721 aa11.31□□□□□ -0.6
CLK4-206ENST00000520878 TDRD1Q9BXT4 1180 aaKnown RBP11.31□□□□□ -0.6
CLK4-206ENST00000520878 VCX3BQ9H321 246 aa11.31□□□□□ -0.6
CLK4-206ENST00000520878 COPS7BQ9H9Q2 264 aaPredicted RBP11.31□□□□□ -0.6
CLK4-206ENST00000520878 ZNF334Q9HCZ1 680 aaPredicted RBP11.31□□□□□ -0.6
CLK4-206ENST00000520878 TLR9Q9NR96 1032 aa11.31□□□□□ -0.6
CLK4-206ENST00000520878 WWOXQ9NZC7 414 aa11.31□□□□□ -0.6
CLK4-206ENST00000520878 STX18Q9P2W9 335 aaKnown RBP11.31□□□□□ -0.6
CLK4-206ENST00000520878 HECAQ9UBI9 543 aaPredicted RBP11.31□□□□□ -0.6
CLK4-206ENST00000520878 CD84Q9UIB8 345 aa11.31□□□□□ -0.6
CLK4-206ENST00000520878 ARIH1Q9Y4X5 557 aaPredicted RBP11.31□□□□□ -0.6
CLK4-206ENST00000520878 FFAR3O14843 346 aa11.31□□□□□ -0.6
CLK4-206ENST00000520878 GPR42O15529 346 aa11.31□□□□□ -0.6
CLK4-206ENST00000520878 NPHS1O60500 1241 aa11.31□□□□□ -0.6
CLK4-206ENST00000520878 FKBP6O75344 327 aa11.31□□□□□ -0.6
CLK4-206ENST00000520878 IGSF6O95976 241 aa11.31□□□□□ -0.6
CLK4-206ENST00000520878 EPOP01588 193 aa11.31□□□□□ -0.6
CLK4-206ENST00000520878 CNPP09543 421 aaKnown RBP11.31□□□□□ -0.6
CLK4-206ENST00000520878 SBK3P0C264 359 aa11.31□□□□□ -0.6
CLK4-206ENST00000520878 ZNF7P17097 686 aaPredicted RBP11.31□□□□□ -0.6
CLK4-206ENST00000520878 ME2P23368 584 aa11.31□□□□□ -0.6
CLK4-206ENST00000520878 RGS4P49798 205 aa11.31□□□□□ -0.6
CLK4-206ENST00000520878 CREB5Q02930 508 aa11.31□□□□□ -0.6
CLK4-206ENST00000520878 HSPA14Q0VDF9 509 aa11.31□□□□□ -0.6
CLK4-206ENST00000520878 C6orf10Q5SRN2 563 aa11.31□□□□□ -0.6
CLK4-206ENST00000520878 CNTN4Q8IWV2 1026 aa11.31□□□□□ -0.6
CLK4-206ENST00000520878 LSMEM2Q8N112 164 aa11.31□□□□□ -0.6
CLK4-206ENST00000520878 TCF25Q9BQ70 676 aa11.31□□□□□ -0.6
CLK4-206ENST00000520878 TMEM106CQ9BVX2 250 aa11.31□□□□□ -0.6
CLK4-206ENST00000520878 GALPQ9UBC7 116 aa11.31□□□□□ -0.6
CLK4-206ENST00000520878 EME2A4GXA9 379 aaPredicted RBP11.3□□□□□ -0.6
CLK4-206ENST00000520878 PIP5K1BO14986 540 aa11.3□□□□□ -0.6
CLK4-206ENST00000520878 ZNF37AP17032 561 aaPredicted RBP11.3□□□□□ -0.6
CLK4-206ENST00000520878 IMPDH1P20839 514 aa11.3□□□□□ -0.6
CLK4-206ENST00000520878 CTNNB1P35222 781 aa11.3□□□□□ -0.6
CLK4-206ENST00000520878 MAGEA12P43365 314 aa11.3□□□□□ -0.6
CLK4-206ENST00000520878 C1QTNF8P60827 252 aa11.3□□□□□ -0.6
CLK4-206ENST00000520878 PSME3P61289 254 aa11.3□□□□□ -0.6
CLK4-206ENST00000520878 BOP1Q14137 746 aaKnown RBP11.3□□□□□ -0.6
CLK4-206ENST00000520878 OR4D1Q15615 310 aa11.3□□□□□ -0.6
CLK4-206ENST00000520878 IMPG1Q17R60 797 aa11.3□□□□□ -0.6
CLK4-206ENST00000520878 TMEM207Q6UWW9 146 aa11.3□□□□□ -0.6
CLK4-206ENST00000520878 ZNF366Q8N895 744 aa11.3□□□□□ -0.6
CLK4-206ENST00000520878 GDPD5Q8WTR4 605 aa11.3□□□□□ -0.6
CLK4-206ENST00000520878 MTFMTQ96DP5 389 aaKnown RBP11.3□□□□□ -0.6
CLK4-206ENST00000520878 C19orf60Q96EN9 201 aa11.3□□□□□ -0.6
CLK4-206ENST00000520878 YIPF3Q9GZM5 350 aa11.3□□□□□ -0.6
CLK4-206ENST00000520878 KNL1Q8NG31 2342 aa11.3□□□□□ -0.6
CLK4-206ENST00000520878 TDRD15B5MCY1 1934 aaKnown RBP11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms