RNA–Protein interactions for RNA: ENST00000520868.5

PABPC1-216, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 5

Gene PABPC1, Length 971 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-216ENST00000520868 SYCP3Q8IZU3 236 aa6.14□□□□□ -1.43
PABPC1-216ENST00000520868 DEFB119Q8N690 84 aa6.14□□□□□ -1.43
PABPC1-216ENST00000520868 ALLCQ8N6M5 410 aa6.14□□□□□ -1.43
PABPC1-216ENST00000520868 CCDC26Q8TAB7 109 aa6.14□□□□□ -1.43
PABPC1-216ENST00000520868 MYLPFQ96A32 169 aa6.14□□□□□ -1.43
PABPC1-216ENST00000520868 CNOT6LQ96LI5 555 aaKnown RBP6.14□□□□□ -1.43
PABPC1-216ENST00000520868 SLC46A1Q96NT5 459 aa6.14□□□□□ -1.43
PABPC1-216ENST00000520868 ACCSQ96QU6 501 aa6.14□□□□□ -1.43
PABPC1-216ENST00000520868 PKMYT1Q99640 499 aa6.14□□□□□ -1.43
PABPC1-216ENST00000520868 PANK2Q9BZ23 570 aa6.14□□□□□ -1.43
PABPC1-216ENST00000520868 ST6GALNAC4Q9H4F1 302 aa6.14□□□□□ -1.43
PABPC1-216ENST00000520868 PDE11AQ9HCR9 933 aa6.14□□□□□ -1.43
PABPC1-216ENST00000520868 RBAKQ9NYW8 714 aaPredicted RBP6.14□□□□□ -1.43
PABPC1-216ENST00000520868 BCCIPQ9P287 314 aaKnown RBP eCLIP6.14□□□□□ -1.43
PABPC1-216ENST00000520868 ZNF180Q9UJW8 692 aa6.14□□□□□ -1.43
PABPC1-216ENST00000520868 MMP17Q9ULZ9 603 aa6.14□□□□□ -1.43
PABPC1-216ENST00000520868 ARHGAP26Q9UNA1 814 aa6.14□□□□□ -1.43
PABPC1-216ENST00000520868 EXOC7Q9UPT5 735 aa6.14□□□□□ -1.43
PABPC1-216ENST00000520868 FRMD4BQ9Y2L6 1034 aa6.14□□□□□ -1.43
PABPC1-216ENST00000520868 SPAARA0A1B0GVQ0 90 aa6.13□□□□□ -1.43
PABPC1-216ENST00000520868 SGK1O00141 431 aa6.13□□□□□ -1.43
PABPC1-216ENST00000520868 AP1G1O43747 822 aa6.13□□□□□ -1.43
PABPC1-216ENST00000520868 TLR5O60602 858 aa6.13□□□□□ -1.43
PABPC1-216ENST00000520868 DNAJB5O75953 348 aa6.13□□□□□ -1.43
PABPC1-216ENST00000520868 KLF8O95600 359 aaPredicted RBP6.13□□□□□ -1.43
PABPC1-216ENST00000520868 APODP05090 189 aa6.13□□□□□ -1.43
PABPC1-216ENST00000520868 TMEM191BP0C7N4 346 aa6.13□□□□□ -1.43
PABPC1-216ENST00000520868 EBLN1P0CF75 366 aa6.13□□□□□ -1.43
PABPC1-216ENST00000520868 IDEP14735 1019 aa6.13□□□□□ -1.43
PABPC1-216ENST00000520868 GAP43P17677 238 aa6.13□□□□□ -1.43
PABPC1-216ENST00000520868 ANXA13P27216 316 aa6.13□□□□□ -1.43
PABPC1-216ENST00000520868 ITPKBP27987 946 aa6.13□□□□□ -1.43
PABPC1-216ENST00000520868 PTGER3P43115 390 aa6.13□□□□□ -1.43
PABPC1-216ENST00000520868 MAGEA11P43364 429 aa6.13□□□□□ -1.43
PABPC1-216ENST00000520868 CCT8P50990 548 aa6.13□□□□□ -1.43
PABPC1-216ENST00000520868 CASP5P51878 434 aa6.13□□□□□ -1.43
PABPC1-216ENST00000520868 EPHB1P54762 984 aa6.13□□□□□ -1.43
PABPC1-216ENST00000520868 LMAN2Q12907 356 aa6.13□□□□□ -1.43
PABPC1-216ENST00000520868 IQCB1Q15051 598 aa6.13□□□□□ -1.43
PABPC1-216ENST00000520868 CFAP221Q4G0U5 840 aa6.13□□□□□ -1.43
PABPC1-216ENST00000520868 RRAGBQ5VZM2 374 aa6.13□□□□□ -1.43
PABPC1-216ENST00000520868 ZNF788Q6ZQV5 615 aa6.13□□□□□ -1.43
PABPC1-216ENST00000520868 DENND5BQ6ZUT9 1274 aa6.13□□□□□ -1.43
PABPC1-216ENST00000520868 LPCAT2Q7L5N7 544 aa6.13□□□□□ -1.43
PABPC1-216ENST00000520868 DTX2Q86UW9 622 aa6.13□□□□□ -1.43
PABPC1-216ENST00000520868 DENND1CQ8IV53 801 aa6.13□□□□□ -1.43
PABPC1-216ENST00000520868 LRRC52Q8N7C0 313 aa6.13□□□□□ -1.43
PABPC1-216ENST00000520868 IL17RCQ8NAC3 791 aa6.13□□□□□ -1.43
PABPC1-216ENST00000520868 OR5B17Q8NGF7 314 aa6.13□□□□□ -1.43
PABPC1-216ENST00000520868 OLIG1Q8TAK6 271 aa6.13□□□□□ -1.43
PABPC1-216ENST00000520868 HMGB4Q8WW32 186 aa6.13□□□□□ -1.43
PABPC1-216ENST00000520868 HVCN1Q96D96 273 aa6.13□□□□□ -1.43
PABPC1-216ENST00000520868 DNAJC19Q96DA6 116 aa6.13□□□□□ -1.43
PABPC1-216ENST00000520868 HPDLQ96IR7 371 aa6.13□□□□□ -1.43
PABPC1-216ENST00000520868 ANKRD36BP1Q96IX9 119 aa6.13□□□□□ -1.43
PABPC1-216ENST00000520868 SPATA17Q96L03 361 aa6.13□□□□□ -1.43
PABPC1-216ENST00000520868 FNBP1Q96RU3 617 aa6.13□□□□□ -1.43
PABPC1-216ENST00000520868 MMS19Q96T76 1030 aa6.13□□□□□ -1.43
PABPC1-216ENST00000520868 SYT15Q9BQS2 421 aa6.13□□□□□ -1.43
PABPC1-216ENST00000520868 CBWD1Q9BRT8 395 aa6.13□□□□□ -1.43
PABPC1-216ENST00000520868 STRA6Q9BX79 667 aa6.13□□□□□ -1.43
PABPC1-216ENST00000520868 NUSAP1Q9BXS6 441 aaKnown RBP6.13□□□□□ -1.43
PABPC1-216ENST00000520868 FGFBP2Q9BYJ0 223 aa6.13□□□□□ -1.43
PABPC1-216ENST00000520868 MTMR12Q9C0I1 747 aa6.13□□□□□ -1.43
PABPC1-216ENST00000520868 SLC32A1Q9H598 525 aa6.13□□□□□ -1.43
PABPC1-216ENST00000520868 FSCN3Q9NQT6 498 aa6.13□□□□□ -1.43
PABPC1-216ENST00000520868 SERTAD4Q9NUC0 356 aa6.13□□□□□ -1.43
PABPC1-216ENST00000520868 GDAP2Q9NXN4 497 aa6.13□□□□□ -1.43
PABPC1-216ENST00000520868 SIX4Q9UIU6 781 aa6.13□□□□□ -1.43
PABPC1-216ENST00000520868 ITGA11Q9UKX5 1188 aa6.13□□□□□ -1.43
PABPC1-216ENST00000520868 CDH9Q9ULB4 789 aa6.13□□□□□ -1.43
PABPC1-216ENST00000520868 SMC3Q9UQE7 1217 aa6.13□□□□□ -1.43
PABPC1-216ENST00000520868 CPQQ9Y646 472 aa6.13□□□□□ -1.43
PABPC1-216ENST00000520868 ATXN2Q99700 1313 aaKnown RBP6.13□□□□□ -1.43
PABPC1-216ENST00000520868 ZZEF1O43149 2961 aa6.13□□□□□ -1.43
PABPC1-216ENST00000520868 ANK1P16157 1881 aa6.13□□□□□ -1.43
PABPC1-216ENST00000520868 BAHCC1Q9P281 2608 aa6.12□□□□□ -1.43
PABPC1-216ENST00000520868 A0A088AWK7 358 aa6.12□□□□□ -1.43
PABPC1-216ENST00000520868 TCRBV21S2A2A0A5A6 115 aa6.12□□□□□ -1.43
PABPC1-216ENST00000520868 TBC1D3BA6NDS4 549 aa6.12□□□□□ -1.43
PABPC1-216ENST00000520868 ZNF840PA6NDX5 716 aa6.12□□□□□ -1.43
PABPC1-216ENST00000520868 SRRM3A6NNA2 597 aaPredicted RBP6.12□□□□□ -1.43
PABPC1-216ENST00000520868 F8VP50 259 aa6.12□□□□□ -1.43
PABPC1-216ENST00000520868 H3BML4 177 aa6.12□□□□□ -1.43
PABPC1-216ENST00000520868 AKAP10O43572 662 aa6.12□□□□□ -1.43
PABPC1-216ENST00000520868 UNC5CO95185 931 aa6.12□□□□□ -1.43
PABPC1-216ENST00000520868 KAT7O95251 611 aa6.12□□□□□ -1.43
PABPC1-216ENST00000520868 BMP15O95972 392 aa6.12□□□□□ -1.43
PABPC1-216ENST00000520868 TNNC2P02585 160 aa6.12□□□□□ -1.43
PABPC1-216ENST00000520868 GRPP07492 148 aa6.12□□□□□ -1.43
PABPC1-216ENST00000520868 MBL2P11226 248 aaPredicted RBP6.12□□□□□ -1.43
PABPC1-216ENST00000520868 NDUFB7P17568 137 aa6.12□□□□□ -1.43
PABPC1-216ENST00000520868 ENGP17813 658 aa6.12□□□□□ -1.43
PABPC1-216ENST00000520868 PPIFP30405 207 aaKnown RBP6.12□□□□□ -1.43
PABPC1-216ENST00000520868 P2RY2P41231 377 aa6.12□□□□□ -1.43
PABPC1-216ENST00000520868 ALDH9A1P49189 494 aa6.12□□□□□ -1.43
PABPC1-216ENST00000520868 TSC2P49815 1807 aa6.12□□□□□ -1.43
PABPC1-216ENST00000520868 PDE6CP51160 858 aa6.12□□□□□ -1.43
PABPC1-216ENST00000520868 ATXN3P54252 364 aaPredicted RBP6.12□□□□□ -1.43
PABPC1-216ENST00000520868 SLC7A9P82251 487 aa6.12□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms