RNA–Protein interactions for RNA: ENST00000520399.1

ERGIC1-208, Transcript of endoplasmic reticulum-golgi intermediate compartment 1, humanhuman

TSL 1 (best)

Gene ERGIC1, Length 5,687 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC1-208ENST00000520399 REEP1Q9H902 201 aa12.09□□□□□ -0.47
ERGIC1-208ENST00000520399 FAM53CQ9NYF3 392 aa12.09□□□□□ -0.47
ERGIC1-208ENST00000520399 ZNF214Q9UL59 606 aaPredicted RBP12.09□□□□□ -0.47
ERGIC1-208ENST00000520399 PSIP1O75475 530 aaKnown RBP12.09□□□□□ -0.47
ERGIC1-208ENST00000520399 SERPINA3P01011 423 aa12.09□□□□□ -0.47
ERGIC1-208ENST00000520399 IFNA6P05013 189 aa12.09□□□□□ -0.47
ERGIC1-208ENST00000520399 GOT1P17174 413 aa12.09□□□□□ -0.47
ERGIC1-208ENST00000520399 MARCKSL1P49006 195 aa12.09□□□□□ -0.47
ERGIC1-208ENST00000520399 PLK1P53350 603 aa12.09□□□□□ -0.47
ERGIC1-208ENST00000520399 MRPS5P82675 430 aaKnown RBP12.09□□□□□ -0.47
ERGIC1-208ENST00000520399 TNFAIP8L3Q5GJ75 292 aa12.09□□□□□ -0.47
ERGIC1-208ENST00000520399 DCLRE1AQ6PJP8 1040 aa12.09□□□□□ -0.47
ERGIC1-208ENST00000520399 OAFQ86UD1 273 aa12.09□□□□□ -0.47
ERGIC1-208ENST00000520399 PRELID2Q8N945 189 aa12.09□□□□□ -0.47
ERGIC1-208ENST00000520399 PLEKHO2Q8TD55 490 aa12.09□□□□□ -0.47
ERGIC1-208ENST00000520399 ARL15Q9NXU5 204 aa12.09□□□□□ -0.47
ERGIC1-208ENST00000520399 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP12.09□□□□□ -0.47
ERGIC1-208ENST00000520399 CLEC4AQ9UMR7 237 aa12.09□□□□□ -0.47
ERGIC1-208ENST00000520399 MRPS7Q9Y2R9 242 aaKnown RBP12.09□□□□□ -0.47
ERGIC1-208ENST00000520399 THOP1P52888 689 aa12.08□□□□□ -0.48
ERGIC1-208ENST00000520399 AIF1P55008 147 aa12.08□□□□□ -0.48
ERGIC1-208ENST00000520399 SNRPD1P62314 119 aaKnown RBP12.08□□□□□ -0.48
ERGIC1-208ENST00000520399 HERC3Q15034 1050 aa12.08□□□□□ -0.48
ERGIC1-208ENST00000520399 TAF5Q15542 800 aa12.08□□□□□ -0.48
ERGIC1-208ENST00000520399 MYDGFQ969H8 173 aa12.08□□□□□ -0.48
ERGIC1-208ENST00000520399 OSBPL7Q9BZF2 842 aa12.08□□□□□ -0.48
ERGIC1-208ENST00000520399 SNAP91O60641 907 aa12.08□□□□□ -0.48
ERGIC1-208ENST00000520399 TBL1XO60907 577 aa12.08□□□□□ -0.48
ERGIC1-208ENST00000520399 S100A3P33764 101 aa12.08□□□□□ -0.48
ERGIC1-208ENST00000520399 MAGEA2P43356 314 aa12.08□□□□□ -0.48
ERGIC1-208ENST00000520399 RPL26P61254 145 aaKnown RBP12.08□□□□□ -0.48
ERGIC1-208ENST00000520399 RAB11FIP2Q7L804 512 aa12.08□□□□□ -0.48
ERGIC1-208ENST00000520399 LRRC70Q7Z2Q7 622 aa12.08□□□□□ -0.48
ERGIC1-208ENST00000520399 SLCO6A1Q86UG4 719 aa12.08□□□□□ -0.48
ERGIC1-208ENST00000520399 DENND1CQ8IV53 801 aa12.08□□□□□ -0.48
ERGIC1-208ENST00000520399 MCEMP1Q8IX19 187 aa12.08□□□□□ -0.48
ERGIC1-208ENST00000520399 RP9Q8TA86 221 aaKnown RBP12.08□□□□□ -0.48
ERGIC1-208ENST00000520399 ITFG1Q8TB96 612 aa12.08□□□□□ -0.48
ERGIC1-208ENST00000520399 TP53INP1Q96A56 240 aa12.08□□□□□ -0.48
ERGIC1-208ENST00000520399 DUSP16Q9BY84 665 aa12.08□□□□□ -0.48
ERGIC1-208ENST00000520399 TMEM216Q9P0N5 145 aa12.08□□□□□ -0.48
ERGIC1-208ENST00000520399 MAPRE3Q9UPY8 281 aa12.08□□□□□ -0.48
ERGIC1-208ENST00000520399 AFDNP55196 1824 aaKnown RBP12.08□□□□□ -0.48
ERGIC1-208ENST00000520399 NDUFS2O75306 463 aa12.08□□□□□ -0.48
ERGIC1-208ENST00000520399 COX7A2P14406 83 aa12.08□□□□□ -0.48
ERGIC1-208ENST00000520399 DRG2P55039 364 aaKnown RBP12.08□□□□□ -0.48
ERGIC1-208ENST00000520399 TAS2R40P59535 323 aa12.08□□□□□ -0.48
ERGIC1-208ENST00000520399 FUT2Q10981 343 aa12.08□□□□□ -0.48
ERGIC1-208ENST00000520399 XKRXQ6PP77 449 aa12.08□□□□□ -0.48
ERGIC1-208ENST00000520399 BBS12Q6ZW61 710 aa12.08□□□□□ -0.48
ERGIC1-208ENST00000520399 LRRC52Q8N7C0 313 aa12.08□□□□□ -0.48
ERGIC1-208ENST00000520399 RASGEF1AQ8N9B8 481 aa12.08□□□□□ -0.48
ERGIC1-208ENST00000520399 NKX2-3Q8TAU0 364 aa12.08□□□□□ -0.48
ERGIC1-208ENST00000520399 RDH11Q8TC12 318 aa12.08□□□□□ -0.48
ERGIC1-208ENST00000520399 TRPM4Q8TD43 1214 aa12.08□□□□□ -0.48
ERGIC1-208ENST00000520399 RNF145Q96MT1 663 aa12.08□□□□□ -0.48
ERGIC1-208ENST00000520399 MBOAT7Q96N66 472 aa12.08□□□□□ -0.48
ERGIC1-208ENST00000520399 C2orf49Q9BVC5 232 aaPredicted RBP12.08□□□□□ -0.48
ERGIC1-208ENST00000520399 CDADC1Q9BWV3 514 aa12.08□□□□□ -0.48
ERGIC1-208ENST00000520399 GRIP1Q9Y3R0 1128 aa12.08□□□□□ -0.48
ERGIC1-208ENST00000520399 CTSEP14091 401 aa12.08□□□□□ -0.48
ERGIC1-208ENST00000520399 MAPK8P45983 427 aa12.08□□□□□ -0.48
ERGIC1-208ENST00000520399 GDI2P50395 445 aaKnown RBP12.08□□□□□ -0.48
ERGIC1-208ENST00000520399 ZNF829Q3KNS6 432 aaPredicted RBP12.08□□□□□ -0.48
ERGIC1-208ENST00000520399 UNC5AQ6ZN44 842 aa12.08□□□□□ -0.48
ERGIC1-208ENST00000520399 BHLHE22Q8NFJ8 381 aaPredicted RBP12.08□□□□□ -0.48
ERGIC1-208ENST00000520399 PPP1R13LQ8WUF5 828 aa12.08□□□□□ -0.48
ERGIC1-208ENST00000520399 RHBGQ9H310 441 aa12.08□□□□□ -0.48
ERGIC1-208ENST00000520399 TMPRSS4Q9NRS4 437 aa12.08□□□□□ -0.48
ERGIC1-208ENST00000520399 TBC1D30Q9Y2I9 924 aa12.08□□□□□ -0.48
ERGIC1-208ENST00000520399 CAMTA1Q9Y6Y1 1673 aa12.07□□□□□ -0.48
ERGIC1-208ENST00000520399 ISPDA4D126 451 aa12.07□□□□□ -0.48
ERGIC1-208ENST00000520399 FSCN2O14926 492 aa12.07□□□□□ -0.48
ERGIC1-208ENST00000520399 NUDT17P0C025 328 aa12.07□□□□□ -0.48
ERGIC1-208ENST00000520399 GIMD1P0DJR0 217 aa12.07□□□□□ -0.48
ERGIC1-208ENST00000520399 PFKFB4Q16877 469 aa12.07□□□□□ -0.48
ERGIC1-208ENST00000520399 PPP1R26Q5T8A7 1209 aaPredicted RBP12.07□□□□□ -0.48
ERGIC1-208ENST00000520399 INTS11Q5TA45 600 aaKnown RBP12.07□□□□□ -0.48
ERGIC1-208ENST00000520399 C9orf57Q5W0N0 161 aa12.07□□□□□ -0.48
ERGIC1-208ENST00000520399 CYP4X1Q8N118 509 aa12.07□□□□□ -0.48
ERGIC1-208ENST00000520399 LSM14AQ8ND56 463 aaKnown RBP12.07□□□□□ -0.48
ERGIC1-208ENST00000520399 ADCY4Q8NFM4 1077 aa12.07□□□□□ -0.48
ERGIC1-208ENST00000520399 C8orf48Q96LL4 319 aa12.07□□□□□ -0.48
ERGIC1-208ENST00000520399 HNRNPABQ99729 332 aaKnown RBP12.07□□□□□ -0.48
ERGIC1-208ENST00000520399 SENP6Q9GZR1 1112 aaPredicted RBP12.07□□□□□ -0.48
ERGIC1-208ENST00000520399 CST11Q9H112 138 aa12.07□□□□□ -0.48
ERGIC1-208ENST00000520399 LHX5Q9H2C1 402 aa12.07□□□□□ -0.48
ERGIC1-208ENST00000520399 FAIMQ9NVQ4 179 aa12.07□□□□□ -0.48
ERGIC1-208ENST00000520399 ST3GAL5Q9UNP4 418 aa12.07□□□□□ -0.48
ERGIC1-208ENST00000520399 INVSQ9Y283 1065 aa12.07□□□□□ -0.48
ERGIC1-208ENST00000520399 IFNA7P01567 189 aa12.07□□□□□ -0.48
ERGIC1-208ENST00000520399 MATKP42679 507 aa12.07□□□□□ -0.48
ERGIC1-208ENST00000520399 PON2Q15165 354 aa12.07□□□□□ -0.48
ERGIC1-208ENST00000520399 PPP2R2DQ66LE6 453 aa12.07□□□□□ -0.48
ERGIC1-208ENST00000520399 ABHD15Q6UXT9 468 aa12.07□□□□□ -0.48
ERGIC1-208ENST00000520399 CYP2R1Q6VVX0 501 aa12.07□□□□□ -0.48
ERGIC1-208ENST00000520399 UTS2BQ765I0 119 aa12.07□□□□□ -0.48
ERGIC1-208ENST00000520399 TMIEQ8NEW7 156 aa12.07□□□□□ -0.48
ERGIC1-208ENST00000520399 OR10H5Q8NGA6 315 aa12.07□□□□□ -0.48
ERGIC1-208ENST00000520399 CXorf40AQ8TE69 158 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms